Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_N01
         (872 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   5.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   5.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   5.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +2

Query: 548  CADCLYGFYDIDSIKSNLNMQETDCTDEIDFYKPSTSMQN 667
            C    YGF  +DS    L   ++    + +FYK   S ++
Sbjct: 2350 CTHINYGFAVLDSSSMTLKPHDSWADIDNEFYKKVVSYKS 2389


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 648 PQRLCKTSMNPHQNAKNCIESNTTEKESCT 737
           PQ    T   P Q ++   ES+TT+K   T
Sbjct: 401 PQPTQTTESEPTQASEQPTESSTTQKPQTT 430


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 349 SGACAYKFTRVQAQGEFLLNSRRLAERSINNM 254
           S A AY+FT+V  + + +  S+  +E +  N+
Sbjct: 238 STALAYRFTQVTDRTQSMSESKNKSESAWKNL 269


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 349 SGACAYKFTRVQAQGEFLLNSRRLAERSINNM 254
           S A AY+FT+V  + + +  S+  +E +  N+
Sbjct: 238 STALAYRFTQVTDRTQSMSESKNKSESAWKNL 269


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 349 SGACAYKFTRVQAQGEFLLNSRRLAERSINNM 254
           S A AY+FT+V  + + +  S+  +E +  N+
Sbjct: 238 STALAYRFTQVTDRTQSMSESKNKSESAWKNL 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,860
Number of Sequences: 336
Number of extensions: 3614
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)