Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_N01
         (872 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0830 + 25159758-25162460                                         31   0.91 
03_02_0708 + 10577931-10579511,10579613-10579706,10580694-105808...    31   1.6  
03_06_0222 + 32466379-32466741,32466849-32466948,32467443-324675...    30   2.1  
09_02_0383 - 8259156-8261843                                           28   8.5  
01_06_0933 - 33161687-33162205,33162290-33162376,33162459-331626...    28   8.5  

>06_03_0830 + 25159758-25162460
          Length = 900

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 599 LNMQETDCTDEIDFYKPSTSMQNINESTP 685
           +++ E  CT+E+D +  ST   +IN STP
Sbjct: 502 IDLNENQCTEEVDCHTKSTLSNSINLSTP 530


>03_02_0708 +
           10577931-10579511,10579613-10579706,10580694-10580856,
           10581286-10581491,10581854-10582062
          Length = 750

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 446 EPACLIAYNGHSFDFPILKNQLEKLKVMFSRDVFCADCL 562
           +P   +A+NG SFD P L  + ++ K+    D    D L
Sbjct: 633 KPVLWVAHNGRSFDVPFLMYEFQRSKIEMPGDWLFVDTL 671


>03_06_0222 + 32466379-32466741,32466849-32466948,32467443-32467547,
            32467627-32467789,32467995-32468115,32468625-32468705,
            32468813-32468911,32468955-32468986,32468987-32469137,
            32469477-32469563,32470290-32470409,32470514-32470645,
            32470743-32470840,32470919-32471042,32471126-32471233,
            32471822-32471957,32472751-32472861,32472963-32473026,
            32473133-32473205,32473762-32473938,32474012-32474122,
            32474189-32474449,32474811-32474981,32475073-32475228,
            32475590-32475823,32475936-32476103,32476316-32476425,
            32476513-32477041
          Length = 1394

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = -3

Query: 738  TYSFLFQLYLIQYNFWRFGVDSLMFCIDVEGL*KSISSVQSVSCMFKFDLIESIS*KPYR 559
            T S  F L+ +  N  ++ + SL  C  +  + +++S+ QSVSC FK   + + S K   
Sbjct: 1079 TPSESFILHQLSCNDSKWAISSLPLCDSIRSI-ETVSANQSVSCFFKIKDLGTNSCKEAE 1137

Query: 558  QSAQNTSRL 532
             S+  +  L
Sbjct: 1138 NSSCRSDML 1146


>09_02_0383 - 8259156-8261843
          Length = 895

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/64 (23%), Positives = 29/64 (45%)
 Frame = +2

Query: 140 MVRIETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGETPRVQQKLTLCLY 319
           +V ++     D     +P   G+  ++  ++L     NH++N P+G   R+     L LY
Sbjct: 588 LVNLQCLNLADSFIASLPEKFGDLKQLRILNLSFT--NHLMNIPYGVISRLSMLKVLYLY 645

Query: 320 PRKF 331
             K+
Sbjct: 646 QSKY 649


>01_06_0933 -
           33161687-33162205,33162290-33162376,33162459-33162695,
           33162778-33162886,33162997-33163313,33163398-33163607,
           33165380-33165901
          Length = 666

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 418 YRYIPKHFHGTSLLNRLQRTFL 483
           + Y+PK +H   LL R+Q T++
Sbjct: 203 FEYLPKIYHAVRLLRRMQNTYV 224


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,721,544
Number of Sequences: 37544
Number of extensions: 340100
Number of successful extensions: 690
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)