Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_N01
(872 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ650792-1|ABG43103.1| 278|Homo sapiens 3'-5' exonuclease TREX2... 99 2e-20
DQ145722-1|AAZ38719.1| 236|Homo sapiens three prime repair exon... 99 2e-20
AF319573-1|AAK07620.1| 236|Homo sapiens 3'-5' exonuclease TREX2... 99 2e-20
AF319572-1|AAK07619.1| 279|Homo sapiens 3'-5' exonuclease TREX2... 99 2e-20
AF319571-1|AAK07618.1| 279|Homo sapiens 3'-5' exonuclease TREX2... 99 2e-20
AF319570-1|AAK07617.1| 236|Homo sapiens 3'-5' exonuclease TREX2... 99 2e-20
AF151107-1|AAD48776.1| 236|Homo sapiens 3'-5' exonuclease TREX2... 99 2e-20
CR457119-1|CAG33400.1| 304|Homo sapiens TREX1 protein. 75 3e-13
BT020053-1|AAV38856.1| 304|Homo sapiens three prime repair exon... 75 3e-13
BT020052-1|AAV38855.1| 304|Homo sapiens three prime repair exon... 75 3e-13
BC023630-1|AAH23630.1| 369|Homo sapiens three prime repair exon... 75 3e-13
AJ243797-1|CAB50866.1| 304|Homo sapiens deoxyribonuclease III (... 75 3e-13
AF483777-1|AAL82504.1| 304|Homo sapiens three prime repair exon... 75 3e-13
AF319569-1|AAK07616.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 75 3e-13
AF319568-1|AAK07615.1| 369|Homo sapiens 3'-5' exonuclease TREX1... 75 3e-13
AF319567-1|AAK07614.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 75 3e-13
AF319566-1|AAK07613.1| 314|Homo sapiens 3'-5' exonuclease TREX1... 75 3e-13
AF151105-1|AAD48774.2| 314|Homo sapiens 3'-5' exonuclease TREX1... 75 3e-13
BC047321-1|AAH47321.1| 417|Homo sapiens tumor necrosis factor r... 32 2.4
AY358888-1|AAQ89247.1| 417|Homo sapiens TROY protein. 32 2.4
AL161422-2|CAH70837.2| 417|Homo sapiens tumor necrosis factor r... 32 2.4
AL161422-1|CAH70838.1| 423|Homo sapiens tumor necrosis factor r... 32 2.4
AF246999-1|AAK28396.1| 423|Homo sapiens TRADEbeta protein. 32 2.4
AF246998-1|AAK28395.1| 417|Homo sapiens TRADEalpha protein. 32 2.4
AF167555-1|AAF71828.1| 423|Homo sapiens TAJ-alpha protein. 32 2.4
AB040434-1|BAB03269.1| 423|Homo sapiens hTROY protein. 32 2.4
>DQ650792-1|ABG43103.1| 278|Homo sapiens 3'-5' exonuclease TREX2
long form protein.
Length = 278
Score = 98.7 bits (235), Expect = 2e-20
Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 7/161 (4%)
Frame = +2
Query: 137 EMVRIETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGET-----PRVQQK 301
E R ETFVF+DLE T +P + I E+SL AV R+ + N E+ PRV K
Sbjct: 45 EAPRAETFVFLDLEATGLPSVE---PEIAELSLFAVHRSSLENPEHDESGALVLPRVLDK 101
Query: 302 LTLCLYPRKFISTGATEVTKLSNELLEH--EPPFNLEVFKIIDTFLSIFTEPACLIAYNG 475
LTLC+ P + + A+E+T LS+E L + F+ V + + FLS P CL+A+NG
Sbjct: 102 LTLCMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNG 161
Query: 476 HSFDFPILKNQLEKLKVMFSRDVFCADCLYGFYDIDSIKSN 598
+DFP+L +L +L RD C D L +D S+
Sbjct: 162 FDYDFPLLCAELRRLGARLPRDTVCLDTLPALRGLDRAHSH 202
>DQ145722-1|AAZ38719.1| 236|Homo sapiens three prime repair
exonuclease 2 protein.
Length = 236
Score = 98.7 bits (235), Expect = 2e-20
Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 7/161 (4%)
Frame = +2
Query: 137 EMVRIETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGET-----PRVQQK 301
E R ETFVF+DLE T +P + I E+SL AV R+ + N E+ PRV K
Sbjct: 3 EAPRAETFVFLDLEATGLPSVE---PEIAELSLFAVHRSSLENPEHDESGALVLPRVLDK 59
Query: 302 LTLCLYPRKFISTGATEVTKLSNELLEH--EPPFNLEVFKIIDTFLSIFTEPACLIAYNG 475
LTLC+ P + + A+E+T LS+E L + F+ V + + FLS P CL+A+NG
Sbjct: 60 LTLCMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNG 119
Query: 476 HSFDFPILKNQLEKLKVMFSRDVFCADCLYGFYDIDSIKSN 598
+DFP+L +L +L RD C D L +D S+
Sbjct: 120 FDYDFPLLCAELRRLGARLPRDTVCLDTLPALRGLDRAHSH 160
>AF319573-1|AAK07620.1| 236|Homo sapiens 3'-5' exonuclease TREX2
protein.
Length = 236
Score = 98.7 bits (235), Expect = 2e-20
Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 7/161 (4%)
Frame = +2
Query: 137 EMVRIETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGET-----PRVQQK 301
E R ETFVF+DLE T +P + I E+SL AV R+ + N E+ PRV K
Sbjct: 3 EAPRAETFVFLDLEATGLPSVE---PEIAELSLFAVHRSSLENPEHDESGALVLPRVLDK 59
Query: 302 LTLCLYPRKFISTGATEVTKLSNELLEH--EPPFNLEVFKIIDTFLSIFTEPACLIAYNG 475
LTLC+ P + + A+E+T LS+E L + F+ V + + FLS P CL+A+NG
Sbjct: 60 LTLCMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNG 119
Query: 476 HSFDFPILKNQLEKLKVMFSRDVFCADCLYGFYDIDSIKSN 598
+DFP+L +L +L RD C D L +D S+
Sbjct: 120 FDYDFPLLCAELRRLGARLPRDTVCLDTLPALRGLDRAHSH 160
>AF319572-1|AAK07619.1| 279|Homo sapiens 3'-5' exonuclease
TREX2-like protein protein.
Length = 279
Score = 98.7 bits (235), Expect = 2e-20
Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 7/161 (4%)
Frame = +2
Query: 137 EMVRIETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGET-----PRVQQK 301
E R ETFVF+DLE T +P + I E+SL AV R+ + N E+ PRV K
Sbjct: 46 EAPRAETFVFLDLEATGLPSVE---PEIAELSLFAVHRSSLENPEHDESGALVLPRVLDK 102
Query: 302 LTLCLYPRKFISTGATEVTKLSNELLEH--EPPFNLEVFKIIDTFLSIFTEPACLIAYNG 475
LTLC+ P + + A+E+T LS+E L + F+ V + + FLS P CL+A+NG
Sbjct: 103 LTLCMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNG 162
Query: 476 HSFDFPILKNQLEKLKVMFSRDVFCADCLYGFYDIDSIKSN 598
+DFP+L +L +L RD C D L +D S+
Sbjct: 163 FDYDFPLLCAELRRLGARLPRDTVCLDTLPALRGLDRAHSH 203
>AF319571-1|AAK07618.1| 279|Homo sapiens 3'-5' exonuclease
TREX2-like protein protein.
Length = 279
Score = 98.7 bits (235), Expect = 2e-20
Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 7/161 (4%)
Frame = +2
Query: 137 EMVRIETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGET-----PRVQQK 301
E R ETFVF+DLE T +P + I E+SL AV R+ + N E+ PRV K
Sbjct: 46 EAPRAETFVFLDLEATGLPSVE---PEIAELSLFAVHRSSLENPEHDESGALVLPRVLDK 102
Query: 302 LTLCLYPRKFISTGATEVTKLSNELLEH--EPPFNLEVFKIIDTFLSIFTEPACLIAYNG 475
LTLC+ P + + A+E+T LS+E L + F+ V + + FLS P CL+A+NG
Sbjct: 103 LTLCMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNG 162
Query: 476 HSFDFPILKNQLEKLKVMFSRDVFCADCLYGFYDIDSIKSN 598
+DFP+L +L +L RD C D L +D S+
Sbjct: 163 FDYDFPLLCAELRRLGARLPRDTVCLDTLPALRGLDRAHSH 203
>AF319570-1|AAK07617.1| 236|Homo sapiens 3'-5' exonuclease TREX2
protein.
Length = 236
Score = 98.7 bits (235), Expect = 2e-20
Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 7/161 (4%)
Frame = +2
Query: 137 EMVRIETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGET-----PRVQQK 301
E R ETFVF+DLE T +P + I E+SL AV R+ + N E+ PRV K
Sbjct: 3 EAPRAETFVFLDLEATGLPSVE---PEIAELSLFAVHRSSLENPEHDESGALVLPRVLDK 59
Query: 302 LTLCLYPRKFISTGATEVTKLSNELLEH--EPPFNLEVFKIIDTFLSIFTEPACLIAYNG 475
LTLC+ P + + A+E+T LS+E L + F+ V + + FLS P CL+A+NG
Sbjct: 60 LTLCMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNG 119
Query: 476 HSFDFPILKNQLEKLKVMFSRDVFCADCLYGFYDIDSIKSN 598
+DFP+L +L +L RD C D L +D S+
Sbjct: 120 FDYDFPLLCAELRRLGARLPRDTVCLDTLPALRGLDRAHSH 160
>AF151107-1|AAD48776.1| 236|Homo sapiens 3'-5' exonuclease TREX2
protein.
Length = 236
Score = 98.7 bits (235), Expect = 2e-20
Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 7/161 (4%)
Frame = +2
Query: 137 EMVRIETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGET-----PRVQQK 301
E R ETFVF+DLE T +P + I E+SL AV R+ + N E+ PRV K
Sbjct: 3 EAPRAETFVFLDLEATGLPSVE---PEIAELSLFAVHRSSLENPEHDESGALVLPRVLDK 59
Query: 302 LTLCLYPRKFISTGATEVTKLSNELLEH--EPPFNLEVFKIIDTFLSIFTEPACLIAYNG 475
LTLC+ P + + A+E+T LS+E L + F+ V + + FLS P CL+A+NG
Sbjct: 60 LTLCMCPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNG 119
Query: 476 HSFDFPILKNQLEKLKVMFSRDVFCADCLYGFYDIDSIKSN 598
+DFP+L +L +L RD C D L +D S+
Sbjct: 120 FDYDFPLLCAELRRLGARLPRDTVCLDTLPALRGLDRAHSH 160
>CR457119-1|CAG33400.1| 304|Homo sapiens TREX1 protein.
Length = 304
Score = 74.9 bits (176), Expect = 3e-13
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Frame = +2
Query: 149 IETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGE--------TPRVQQKL 304
++T +F D+E T +P + ++TE+ L+AV R + + P + PRV KL
Sbjct: 1 MQTLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKL 57
Query: 305 TLCLYPRKFISTGATEVTKLSNELLE-H-EPPFNLEVFKIIDTFLSIFTEPACLIAYNGH 478
+LC+ P K S A+E+T LS +L H F+ + ++ FL +P CL+A+NG
Sbjct: 58 SLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGD 117
Query: 479 SFDFPILKNQLEKLKVMFSRD-VFCADCL 562
+DFP+L+ +L L + + D FC D +
Sbjct: 118 RYDFPLLQAELAMLGLTSALDGAFCVDSI 146
>BT020053-1|AAV38856.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 74.9 bits (176), Expect = 3e-13
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Frame = +2
Query: 149 IETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGE--------TPRVQQKL 304
++T +F D+E T +P + ++TE+ L+AV R + + P + PRV KL
Sbjct: 1 MQTLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKL 57
Query: 305 TLCLYPRKFISTGATEVTKLSNELLE-H-EPPFNLEVFKIIDTFLSIFTEPACLIAYNGH 478
+LC+ P K S A+E+T LS +L H F+ + ++ FL +P CL+A+NG
Sbjct: 58 SLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGD 117
Query: 479 SFDFPILKNQLEKLKVMFSRD-VFCADCL 562
+DFP+L+ +L L + + D FC D +
Sbjct: 118 RYDFPLLQAELAMLGLTSALDGAFCVDSI 146
>BT020052-1|AAV38855.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 74.9 bits (176), Expect = 3e-13
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Frame = +2
Query: 149 IETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGE--------TPRVQQKL 304
++T +F D+E T +P + ++TE+ L+AV R + + P + PRV KL
Sbjct: 1 MQTLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKL 57
Query: 305 TLCLYPRKFISTGATEVTKLSNELLE-H-EPPFNLEVFKIIDTFLSIFTEPACLIAYNGH 478
+LC+ P K S A+E+T LS +L H F+ + ++ FL +P CL+A+NG
Sbjct: 58 SLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGD 117
Query: 479 SFDFPILKNQLEKLKVMFSRD-VFCADCL 562
+DFP+L+ +L L + + D FC D +
Sbjct: 118 RYDFPLLQAELAMLGLTSALDGAFCVDSI 146
>BC023630-1|AAH23630.1| 369|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 369
Score = 74.9 bits (176), Expect = 3e-13
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Frame = +2
Query: 149 IETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGE--------TPRVQQKL 304
++T +F D+E T +P + ++TE+ L+AV R + + P + PRV KL
Sbjct: 66 MQTLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKL 122
Query: 305 TLCLYPRKFISTGATEVTKLSNELLE-H-EPPFNLEVFKIIDTFLSIFTEPACLIAYNGH 478
+LC+ P K S A+E+T LS +L H F+ + ++ FL +P CL+A+NG
Sbjct: 123 SLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGD 182
Query: 479 SFDFPILKNQLEKLKVMFSRD-VFCADCL 562
+DFP+L+ +L L + + D FC D +
Sbjct: 183 RYDFPLLQAELAMLGLTSALDGAFCVDSI 211
>AJ243797-1|CAB50866.1| 304|Homo sapiens deoxyribonuclease III
(DNase III) protein.
Length = 304
Score = 74.9 bits (176), Expect = 3e-13
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Frame = +2
Query: 149 IETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGE--------TPRVQQKL 304
++T +F D+E T +P + ++TE+ L+AV R + + P + PRV KL
Sbjct: 1 MQTLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKL 57
Query: 305 TLCLYPRKFISTGATEVTKLSNELLE-H-EPPFNLEVFKIIDTFLSIFTEPACLIAYNGH 478
+LC+ P K S A+E+T LS +L H F+ + ++ FL +P CL+A+NG
Sbjct: 58 SLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGD 117
Query: 479 SFDFPILKNQLEKLKVMFSRD-VFCADCL 562
+DFP+L+ +L L + + D FC D +
Sbjct: 118 RYDFPLLQAELAMLGLTSALDGAFCVDSI 146
>AF483777-1|AAL82504.1| 304|Homo sapiens three prime repair
exonuclease 1 protein.
Length = 304
Score = 74.9 bits (176), Expect = 3e-13
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Frame = +2
Query: 149 IETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGE--------TPRVQQKL 304
++T +F D+E T +P + ++TE+ L+AV R + + P + PRV KL
Sbjct: 1 MQTLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKL 57
Query: 305 TLCLYPRKFISTGATEVTKLSNELLE-H-EPPFNLEVFKIIDTFLSIFTEPACLIAYNGH 478
+LC+ P K S A+E+T LS +L H F+ + ++ FL +P CL+A+NG
Sbjct: 58 SLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGD 117
Query: 479 SFDFPILKNQLEKLKVMFSRD-VFCADCL 562
+DFP+L+ +L L + + D FC D +
Sbjct: 118 RYDFPLLQAELAMLGLTSALDGAFCVDSI 146
>AF319569-1|AAK07616.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 74.9 bits (176), Expect = 3e-13
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Frame = +2
Query: 149 IETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGE--------TPRVQQKL 304
++T +F D+E T +P + ++TE+ L+AV R + + P + PRV KL
Sbjct: 11 MQTLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKL 67
Query: 305 TLCLYPRKFISTGATEVTKLSNELLE-H-EPPFNLEVFKIIDTFLSIFTEPACLIAYNGH 478
+LC+ P K S A+E+T LS +L H F+ + ++ FL +P CL+A+NG
Sbjct: 68 SLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGD 127
Query: 479 SFDFPILKNQLEKLKVMFSRD-VFCADCL 562
+DFP+L+ +L L + + D FC D +
Sbjct: 128 RYDFPLLQAELAMLGLTSALDGAFCVDSI 156
>AF319568-1|AAK07615.1| 369|Homo sapiens 3'-5' exonuclease
TREX1-like protein protein.
Length = 369
Score = 74.9 bits (176), Expect = 3e-13
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Frame = +2
Query: 149 IETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGE--------TPRVQQKL 304
++T +F D+E T +P + ++TE+ L+AV R + + P + PRV KL
Sbjct: 66 MQTLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKL 122
Query: 305 TLCLYPRKFISTGATEVTKLSNELLE-H-EPPFNLEVFKIIDTFLSIFTEPACLIAYNGH 478
+LC+ P K S A+E+T LS +L H F+ + ++ FL +P CL+A+NG
Sbjct: 123 SLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGD 182
Query: 479 SFDFPILKNQLEKLKVMFSRD-VFCADCL 562
+DFP+L+ +L L + + D FC D +
Sbjct: 183 RYDFPLLQAELAMLGLTSALDGAFCVDSI 211
>AF319567-1|AAK07614.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 74.9 bits (176), Expect = 3e-13
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Frame = +2
Query: 149 IETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGE--------TPRVQQKL 304
++T +F D+E T +P + ++TE+ L+AV R + + P + PRV KL
Sbjct: 11 MQTLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKL 67
Query: 305 TLCLYPRKFISTGATEVTKLSNELLE-H-EPPFNLEVFKIIDTFLSIFTEPACLIAYNGH 478
+LC+ P K S A+E+T LS +L H F+ + ++ FL +P CL+A+NG
Sbjct: 68 SLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGD 127
Query: 479 SFDFPILKNQLEKLKVMFSRD-VFCADCL 562
+DFP+L+ +L L + + D FC D +
Sbjct: 128 RYDFPLLQAELAMLGLTSALDGAFCVDSI 156
>AF319566-1|AAK07613.1| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 74.9 bits (176), Expect = 3e-13
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Frame = +2
Query: 149 IETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGE--------TPRVQQKL 304
++T +F D+E T +P + ++TE+ L+AV R + + P + PRV KL
Sbjct: 11 MQTLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKL 67
Query: 305 TLCLYPRKFISTGATEVTKLSNELLE-H-EPPFNLEVFKIIDTFLSIFTEPACLIAYNGH 478
+LC+ P K S A+E+T LS +L H F+ + ++ FL +P CL+A+NG
Sbjct: 68 SLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGD 127
Query: 479 SFDFPILKNQLEKLKVMFSRD-VFCADCL 562
+DFP+L+ +L L + + D FC D +
Sbjct: 128 RYDFPLLQAELAMLGLTSALDGAFCVDSI 156
>AF151105-1|AAD48774.2| 314|Homo sapiens 3'-5' exonuclease TREX1
protein.
Length = 314
Score = 74.9 bits (176), Expect = 3e-13
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 11/149 (7%)
Frame = +2
Query: 149 IETFVFVDLETTDVPRNDGNTTRITEISLVAVKRNHIVNTPFGE--------TPRVQQKL 304
++T +F D+E T +P + ++TE+ L+AV R + + P + PRV KL
Sbjct: 11 MQTLIFFDMEATGLPFSQ---PKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKL 67
Query: 305 TLCLYPRKFISTGATEVTKLSNELLE-H-EPPFNLEVFKIIDTFLSIFTEPACLIAYNGH 478
+LC+ P K S A+E+T LS +L H F+ + ++ FL +P CL+A+NG
Sbjct: 68 SLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGD 127
Query: 479 SFDFPILKNQLEKLKVMFSRD-VFCADCL 562
+DFP+L+ +L L + + D FC D +
Sbjct: 128 RYDFPLLQAELAMLGLTSALDGAFCVDSI 156
>BC047321-1|AAH47321.1| 417|Homo sapiens tumor necrosis factor
receptor superfamily, member 19 protein.
Length = 417
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 503 NQLEKLKVMFSRDVFCADCLYGFYDIDSIKSNLNMQETDCTDEIDFYKP 649
N+ +K + D C DCL GFY + +M+ C D Y+P
Sbjct: 99 NRFQKANCSATSDAICGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEP 147
>AY358888-1|AAQ89247.1| 417|Homo sapiens TROY protein.
Length = 417
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 503 NQLEKLKVMFSRDVFCADCLYGFYDIDSIKSNLNMQETDCTDEIDFYKP 649
N+ +K + D C DCL GFY + +M+ C D Y+P
Sbjct: 99 NRFQKANCSATSDAICGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEP 147
>AL161422-2|CAH70837.2| 417|Homo sapiens tumor necrosis factor
receptor superfamily, member 19 protein.
Length = 417
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 503 NQLEKLKVMFSRDVFCADCLYGFYDIDSIKSNLNMQETDCTDEIDFYKP 649
N+ +K + D C DCL GFY + +M+ C D Y+P
Sbjct: 99 NRFQKANCSATSDAICGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEP 147
>AL161422-1|CAH70838.1| 423|Homo sapiens tumor necrosis factor
receptor superfamily, member 19 protein.
Length = 423
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 503 NQLEKLKVMFSRDVFCADCLYGFYDIDSIKSNLNMQETDCTDEIDFYKP 649
N+ +K + D C DCL GFY + +M+ C D Y+P
Sbjct: 99 NRFQKANCSATSDAICGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEP 147
>AF246999-1|AAK28396.1| 423|Homo sapiens TRADEbeta protein.
Length = 423
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 503 NQLEKLKVMFSRDVFCADCLYGFYDIDSIKSNLNMQETDCTDEIDFYKP 649
N+ +K + D C DCL GFY + +M+ C D Y+P
Sbjct: 99 NRFQKANCSATSDAICGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEP 147
>AF246998-1|AAK28395.1| 417|Homo sapiens TRADEalpha protein.
Length = 417
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 503 NQLEKLKVMFSRDVFCADCLYGFYDIDSIKSNLNMQETDCTDEIDFYKP 649
N+ +K + D C DCL GFY + +M+ C D Y+P
Sbjct: 99 NRFQKANCSATSDAICGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEP 147
>AF167555-1|AAF71828.1| 423|Homo sapiens TAJ-alpha protein.
Length = 423
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 503 NQLEKLKVMFSRDVFCADCLYGFYDIDSIKSNLNMQETDCTDEIDFYKP 649
N+ +K + D C DCL GFY + +M+ C D Y+P
Sbjct: 99 NRFQKANCSATSDAICGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEP 147
>AB040434-1|BAB03269.1| 423|Homo sapiens hTROY protein.
Length = 423
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 503 NQLEKLKVMFSRDVFCADCLYGFYDIDSIKSNLNMQETDCTDEIDFYKP 649
N+ +K + D C DCL GFY + +M+ C D Y+P
Sbjct: 99 NRFQKANCSATSDAICGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEP 147
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,659,063
Number of Sequences: 237096
Number of extensions: 1899332
Number of successful extensions: 3489
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3464
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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