Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_M22
(867 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 94 4e-18
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 82 2e-14
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 78 3e-13
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 66 8e-10
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 53 8e-06
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 46 0.002
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.047
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.082
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.4
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.4
UniRef50_Q94AI4 Cluster: Methyltransferase-like protein 1; n=2; ... 33 7.1
UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillar... 33 9.4
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 94.3 bits (224), Expect = 4e-18
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +1
Query: 523 FSIGSAPXTSITKIDAQVKGGETRQDYKDTXRXPLXAPSCALLFRPCR 666
FSIGSAP TSITKIDAQV+GGETRQDYKDT R PL APSCALLFRPCR
Sbjct: 16 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCR 63
Score = 40.7 bits (91), Expect = 0.047
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +3
Query: 708 WRFXIXHXVGISXRGRSXXPTWAGCXXP 791
WRF I H VGIS R RS P+WA C P
Sbjct: 77 WRFLIAHAVGISVRCRSFAPSWAVCTNP 104
Score = 35.5 bits (78), Expect = 1.8
Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Frame = +2
Query: 623 PXKLPRALSCSDPAAXXXTCPPFSLRE--XVALSHXSXXRYLXSG*VVRXNLGWVXXPPX 796
P + P P TCPPFSLRE ++H + PP
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRS--FAPSWAVCTNPPF 106
Query: 797 NPTGXPYPXTXVXXP 841
+PT PYP T V P
Sbjct: 107 SPTAAPYPVTIVLSP 121
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 82.2 bits (194), Expect = 2e-14
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = +1
Query: 523 FSIGSAPXTSITKIDAQVKGGETRQDYKDTXRXPLXAPSCALLFRP 660
FSIGSAP TSITK DAQ+ GGETRQDYKDT R PL APSCALLF P
Sbjct: 52 FSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/46 (78%), Positives = 37/46 (80%)
Frame = +1
Query: 523 FSIGSAPXTSITKIDAQVKGGETRQDYKDTXRXPLXAPSCALLFRP 660
FSIGSAP TSI K DAQ+ GGETRQDYKD R PL APSCALLF P
Sbjct: 84 FSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP 129
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 315 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 413
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 66.5 bits (155), Expect = 8e-10
Identities = 36/59 (61%), Positives = 36/59 (61%)
Frame = -2
Query: 554 MLVXGAEPMENXXXXXXXXXXXXXXXXLTCSFLRYPLILWITVLPPLSELIPLAAAERP 378
MLV GAEPME TCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLL---TCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 291 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 458
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 53.2 bits (122), Expect = 8e-06
Identities = 32/80 (40%), Positives = 36/80 (45%)
Frame = +2
Query: 602 IKIPXVXPXKLPRALSCSDPAAXXXTCPPFSLREXVALSHXSXXRYLXSG*VVRXNLGWV 781
+KI V LP ALSCS+PA PPFSL VALSH S +
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVS 91
Query: 782 XXPPXNPTGXPYPXTXVXXP 841
PP +PT PYP T P
Sbjct: 92 KNPPFSPTAAPYPVTVHLSP 111
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 45.6 bits (103), Expect = 0.002
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2
Query: 791 GXXAPSPGWXXRPTPX*DTYXVXYXKAPXFPEGRKAD 681
G A SP W RP P DT V Y KAP FP+G+KA+
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAE 63
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 94 DPDMIRYIDEFGQTTTRMQ 150
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 410 HSKAVIRLSTESGDNAGKNM 469
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 44.0 bits (99), Expect = 0.005
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +1
Query: 523 FSIGSAPXTSITKIDAQVKGGETRQDYKDTXRXPLXAPSCALLFRP 660
F S P T+ITKI Q K +T+ +YK T PL +PS +LLF P
Sbjct: 69 FPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.047
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 289 SALMNRPTRGERRFAYW 339
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.082
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 361 ERGSGRAPNTQTASPRALADSLMQ 290
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 172 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 339
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.4
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 252 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 88
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q94AI4 Cluster: Methyltransferase-like protein 1; n=2;
Arabidopsis thaliana|Rep: Methyltransferase-like protein
1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 775
Score = 33.5 bits (73), Expect = 7.1
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -1
Query: 696 REKGGQVXXXAAGSEQESARGSXQGXTXGIFIVLSGFATFDLSVDFCDARXGGG--AYGK 523
R++ G+ +G++ + RGS G T + G+ T + R G G A G+
Sbjct: 357 RDEAGEASSDYSGAKARNQRGSTPGRTNFVQTPNRGYQTPQGTRGNRPLRGGKGRPAGGR 416
Query: 522 RQQRGLFTVPGXCWPFAHMFFPALSP 445
Q+G +P PFA++ P SP
Sbjct: 417 ENQQGAIPMPIMGSPFANLGMPPPSP 442
>UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillarum
serovar O2|Rep: MobA protein - Listonella anguillarum
serovar O2
Length = 548
Score = 33.1 bits (72), Expect = 9.4
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 207 NGYK*SNSITNFTNKAFFSLHSSCG-LSKLINVSYHVWIQLTLXKGRSAAAVPTI 46
NG+K N + + L++ CG L +L+ + + + LT+ +GR A P++
Sbjct: 488 NGFKAGNGVERAVTNDYDELNAKCGHLDRLLRETDPIGLTLTMEQGRKADPTPSV 542
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,053,830
Number of Sequences: 1657284
Number of extensions: 10470763
Number of successful extensions: 21760
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21753
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77062818868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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