Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_M19
         (881 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    24   1.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    24   1.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    24   1.4  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   7.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   7.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   7.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   7.3  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +3

Query: 144 IAINQNGNKIFGSN*AVLQYIARNSE 221
           +  NQN +K+FG++   L+ IA++ +
Sbjct: 93  VKYNQNYSKVFGNDEKALEQIAKSEK 118


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +3

Query: 144 IAINQNGNKIFGSN*AVLQYIARNSE 221
           +  NQN +K+FG++   L+ IA++ +
Sbjct: 153 VKYNQNYSKVFGNDEKALEQIAKSEK 178


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +3

Query: 144 IAINQNGNKIFGSN*AVLQYIARNSE 221
           +  NQN +K+FG++   L+ IA++ +
Sbjct: 153 VKYNQNYSKVFGNDEKALEQIAKSEK 178


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
 Frame = +1

Query: 250 KVLWTAITLFIFLVCCQIPLF-----GIMSSDSADPFYWIRVILAS 372
           KVL+T++T F +L C  +  +     GI+ +    P ++    + S
Sbjct: 61  KVLYTSLTSFGYLFCASLSFYKAFKIGILLNQLITPLFFFHSFMTS 106


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +3

Query: 204  IARNSETRT*DSIPRESIMDSNHI 275
            +ARN       SIP + + ++ H+
Sbjct: 1502 VARNHRNSVASSIPAKDVFENGHV 1525


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +3

Query: 204  IARNSETRT*DSIPRESIMDSNHI 275
            +ARN       SIP + + ++ H+
Sbjct: 1502 VARNHRNSVASSIPAKDVFENGHV 1525


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +3

Query: 204  IARNSETRT*DSIPRESIMDSNHI 275
            +ARN       SIP + + ++ H+
Sbjct: 1502 VARNHRNSVASSIPAKDVFENGHV 1525


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +3

Query: 204  IARNSETRT*DSIPRESIMDSNHI 275
            +ARN       SIP + + ++ H+
Sbjct: 1502 VARNHRNSVASSIPAKDVFENGHV 1525


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,130
Number of Sequences: 336
Number of extensions: 2466
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)