Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_M14
         (884 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X93562-1|CAA63775.1|  131|Anopheles gambiae defensin protein.          24   7.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.4  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   9.4  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   9.4  

>X93562-1|CAA63775.1|  131|Anopheles gambiae defensin protein.
          Length = 131

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 726 LMALLINSPVRSANPSM*SKCNTIVITV 643
           L  +L+  P  S++P +  KC TIV T+
Sbjct: 12  LKLVLLCLPRASSSPQLIMKCATIVCTI 39


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 309 DWSNSRETLLLRARELFS 362
           +WSNSRE L +   EL S
Sbjct: 262 EWSNSRELLAVAGTELGS 279


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 473 ENSPAYLHSRAVTAGFQEYIEARTLFSLMETKKLISWPEIRDEFVFSI 616
           E+ P Y  +   T GFQ  IE+  + +  E    + +  I   F+F+I
Sbjct: 354 EDPPTYNKTNKFTRGFQNLIESYGIATYREANPAL-YTIITFPFLFAI 400


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = +2

Query: 473 ENSPAYLHSRAVTAGFQEYIEARTLFSLMETKKLISWPEIRDEFVFSI 616
           E  P Y  +   T GFQ  I+A  + S  E    + +  I   F+F I
Sbjct: 362 EAPPTYNRTNKFTRGFQNLIDAYGIASYREANPAL-YTIITFPFLFGI 408


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,055
Number of Sequences: 2352
Number of extensions: 12028
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)