Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_M14
         (884 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047514-1|AAK77246.1|  258|Drosophila melanogaster GH01922p pro...   133   3e-31
AE014297-2027|AAF55183.2|  258|Drosophila melanogaster CG5063-PA...   133   3e-31
AE014297-2026|AAN13659.1|  292|Drosophila melanogaster CG5063-PB...   133   3e-31
DQ448818-1|ABE01846.1|  298|Drosophila melanogaster Trax protein.     133   4e-31
AY118870-1|AAM50730.1|  235|Drosophila melanogaster GM27569p pro...    32   0.92 
AE013599-1113|AAF58784.1|  235|Drosophila melanogaster CG11761-P...    32   0.92 

>AY047514-1|AAK77246.1|  258|Drosophila melanogaster GH01922p
           protein.
          Length = 258

 Score =  133 bits (322), Expect = 3e-31
 Identities = 90/221 (40%), Positives = 123/221 (55%), Gaps = 28/221 (12%)
 Frame = +2

Query: 221 AASLAPDSPILAMFKNAALKLNERQDRHERLVKLSRDITIESKRIIFLLHSAIT-EESTA 397
           AA L  DSPI+  F+  + +L  + DRHER+VKLSRDITIESKRIIFLLHS  + +++  
Sbjct: 21  AAQLDEDSPIVQQFRIYSNELIMKHDRHERIVKLSRDITIESKRIIFLLHSIDSRKQNKE 80

Query: 398 KVIEEAKERFQKLIKGPIKSVGLELENSPAYLHSRAVTAGFQEYIEARTLFSLM------ 559
           KV+EEA++R  KLI    ++V LEL +   Y    + + G QE+IEA T    +      
Sbjct: 81  KVLEEARQRLNKLIAVNFRAVALELRDQDVYQFRSSYSPGLQEFIEAYTYMEYLCHEDAE 140

Query: 560 ---ETKKLISWPEIR------------------DEFVFSIPEAESDKKRTVITMVLHLDY 676
              ETK +  W  I+                   E V +I + ES KK      V   +Y
Sbjct: 141 GENETKSVSDWQAIQAVMQYVEESSQPKEEPTEGEDVQAIAQVESPKKFQF--FVDPTEY 198

Query: 677 MLGLADLTGELMRRAINSISNGDSKGMLSCLSSCQXLYTGV 799
           +LGL+DLTGELMRR INS+ +GD+   L    + Q  Y+G+
Sbjct: 199 ILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSGL 239


>AE014297-2027|AAF55183.2|  258|Drosophila melanogaster CG5063-PA,
           isoform A protein.
          Length = 258

 Score =  133 bits (322), Expect = 3e-31
 Identities = 90/221 (40%), Positives = 123/221 (55%), Gaps = 28/221 (12%)
 Frame = +2

Query: 221 AASLAPDSPILAMFKNAALKLNERQDRHERLVKLSRDITIESKRIIFLLHSAIT-EESTA 397
           AA L  DSPI+  F+  + +L  + DRHER+VKLSRDITIESKRIIFLLHS  + +++  
Sbjct: 21  AAQLDEDSPIVQQFRIYSNELIMKHDRHERIVKLSRDITIESKRIIFLLHSIDSRKQNKE 80

Query: 398 KVIEEAKERFQKLIKGPIKSVGLELENSPAYLHSRAVTAGFQEYIEARTLFSLM------ 559
           KV+EEA++R  KLI    ++V LEL +   Y    + + G QE+IEA T    +      
Sbjct: 81  KVLEEARQRLNKLIAVNFRAVALELRDQDVYQFRSSYSPGLQEFIEAYTYMEYLCHEDAE 140

Query: 560 ---ETKKLISWPEIR------------------DEFVFSIPEAESDKKRTVITMVLHLDY 676
              ETK +  W  I+                   E V +I + ES KK      V   +Y
Sbjct: 141 GENETKSVSDWQAIQAVMQYVEESSQPKEEPTEGEDVQAIAQVESPKKFQF--FVDPTEY 198

Query: 677 MLGLADLTGELMRRAINSISNGDSKGMLSCLSSCQXLYTGV 799
           +LGL+DLTGELMRR INS+ +GD+   L    + Q  Y+G+
Sbjct: 199 ILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSGL 239


>AE014297-2026|AAN13659.1|  292|Drosophila melanogaster CG5063-PB,
           isoform B protein.
          Length = 292

 Score =  133 bits (322), Expect = 3e-31
 Identities = 90/221 (40%), Positives = 123/221 (55%), Gaps = 28/221 (12%)
 Frame = +2

Query: 221 AASLAPDSPILAMFKNAALKLNERQDRHERLVKLSRDITIESKRIIFLLHSAIT-EESTA 397
           AA L  DSPI+  F+  + +L  + DRHER+VKLSRDITIESKRIIFLLHS  + +++  
Sbjct: 21  AAQLDEDSPIVQQFRIYSNELIMKHDRHERIVKLSRDITIESKRIIFLLHSIDSRKQNKE 80

Query: 398 KVIEEAKERFQKLIKGPIKSVGLELENSPAYLHSRAVTAGFQEYIEARTLFSLM------ 559
           KV+EEA++R  KLI    ++V LEL +   Y    + + G QE+IEA T    +      
Sbjct: 81  KVLEEARQRLNKLIAVNFRAVALELRDQDVYQFRSSYSPGLQEFIEAYTYMEYLCHEDAE 140

Query: 560 ---ETKKLISWPEIR------------------DEFVFSIPEAESDKKRTVITMVLHLDY 676
              ETK +  W  I+                   E V +I + ES KK      V   +Y
Sbjct: 141 GENETKSVSDWQAIQAVMQYVEESSQPKEEPTEGEDVQAIAQVESPKKFQF--FVDPTEY 198

Query: 677 MLGLADLTGELMRRAINSISNGDSKGMLSCLSSCQXLYTGV 799
           +LGL+DLTGELMRR INS+ +GD+   L    + Q  Y+G+
Sbjct: 199 ILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSGL 239


>DQ448818-1|ABE01846.1|  298|Drosophila melanogaster Trax protein.
          Length = 298

 Score =  133 bits (321), Expect = 4e-31
 Identities = 90/220 (40%), Positives = 122/220 (55%), Gaps = 28/220 (12%)
 Frame = +2

Query: 221 AASLAPDSPILAMFKNAALKLNERQDRHERLVKLSRDITIESKRIIFLLHSAIT-EESTA 397
           AA L  DSPI+  F+  + +L  + DRHER+VKLSRDITIESKRIIFLLHS  + +++  
Sbjct: 21  AAQLDEDSPIVQQFRIYSNELIMKHDRHERIVKLSRDITIESKRIIFLLHSIDSRKQNKE 80

Query: 398 KVIEEAKERFQKLIKGPIKSVGLELENSPAYLHSRAVTAGFQEYIEARTLFSLM------ 559
           KV+EEA++R  KLI    ++V LEL +   Y    + + G QE+IEA T    +      
Sbjct: 81  KVLEEARQRLNKLIAVNFRAVALELRDQDVYQFRSSYSPGLQEFIEAYTYMEYLCHEDAE 140

Query: 560 ---ETKKLISWPEIR------------------DEFVFSIPEAESDKKRTVITMVLHLDY 676
              ETK +  W  I+                   E V +I + ES KK      V   +Y
Sbjct: 141 GENETKSVSDWQAIQAVMQYVEESSQPKEEPTEGEDVQAIAQVESPKKFQF--FVDPTEY 198

Query: 677 MLGLADLTGELMRRAINSISNGDSKGMLSCLSSCQXLYTG 796
           +LGL+DLTGELMRR INS+ +GD+   L    + Q  Y+G
Sbjct: 199 ILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSG 238


>AY118870-1|AAM50730.1|  235|Drosophila melanogaster GM27569p
           protein.
          Length = 235

 Score = 32.3 bits (70), Expect = 0.92
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +2

Query: 671 DYMLGLADLTGELMRRAINSISNGDSKGMLSCLSSCQXLYTG 796
           DY+LG+  L  EL R A NS++ GD +  L+       L TG
Sbjct: 140 DYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNTG 181


>AE013599-1113|AAF58784.1|  235|Drosophila melanogaster CG11761-PA
           protein.
          Length = 235

 Score = 32.3 bits (70), Expect = 0.92
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +2

Query: 671 DYMLGLADLTGELMRRAINSISNGDSKGMLSCLSSCQXLYTG 796
           DY+LG+  L  EL R A NS++ GD +  L+       L TG
Sbjct: 140 DYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNTG 181


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,104,763
Number of Sequences: 53049
Number of extensions: 521548
Number of successful extensions: 1167
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)