Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_M13
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   3.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   7.3  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   9.7  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.7  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 279 PDLGDLIIERRNHKVPHDLRN 341
           PDL  L++E R  K+ HD  N
Sbjct: 221 PDLIHLLMEARKGKLKHDNSN 241


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +3

Query: 396 LNERKSQDKHTENLIPNLTNSHKSYGYTGIDKD-ESIVSQDKVAF 527
           LN   +  K   +LI +  +    +GY GID D E   + DK  F
Sbjct: 112 LNGIVASSKLRASLISSCLSFFSQWGYDGIDIDWEYPANADKENF 156


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 571 PKTQEPQHRILCPKLFMY 624
           PK QEPQ    CP+   Y
Sbjct: 96  PKLQEPQPSQHCPRKHGY 113


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 432 NLIPNLTNSHKSYGYTGIDKD-ESIVSQDKVAF 527
           NLI +     + YG+ G+D D E   ++DK  F
Sbjct: 124 NLIASSFEYFEKYGFNGLDIDWEYPEAKDKENF 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,552
Number of Sequences: 336
Number of extensions: 3658
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)