Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_M11
(883 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9P2R7 Cluster: Succinyl-CoA ligase [ADP-forming] beta-... 118 2e-25
UniRef50_A0F011 Cluster: Succinate-CoA ligase ADP-forming beta s... 114 2e-24
UniRef50_Q96I99 Cluster: Succinyl-CoA ligase [GDP-forming] beta-... 112 1e-23
UniRef50_Q6PHH4 Cluster: Suclg2 protein; n=8; cellular organisms... 108 2e-22
UniRef50_P53312 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 105 1e-21
UniRef50_O82662 Cluster: Succinyl-CoA ligase [GDP-forming] beta-... 101 2e-20
UniRef50_Q5T9Q8 Cluster: Succinate-CoA ligase, ADP-forming, beta... 100 6e-20
UniRef50_Q5DBL2 Cluster: SJCHGC05557 protein; n=1; Schistosoma j... 100 1e-19
UniRef50_A0BED7 Cluster: Chromosome undetermined scaffold_102, w... 93 8e-18
UniRef50_Q8ILE9 Cluster: ATP-specific succinyl-CoA synthetase be... 89 1e-16
UniRef50_Q1KSE5 Cluster: Mitochondrial putative ATP-specific suc... 86 1e-15
UniRef50_UPI0000DB7A0E Cluster: PREDICTED: similar to Sucb CG106... 85 3e-15
UniRef50_Q03184 Cluster: Succinyl-CoA ligase [GDP-forming] beta-... 84 4e-15
UniRef50_Q4N7Z3 Cluster: ATP-specific succinyl-CoA synthetase be... 84 5e-15
UniRef50_Q4UHL1 Cluster: Succinyl-coA ligase, subunit, putative;... 83 1e-14
UniRef50_A7AS83 Cluster: Succinly CoA-ligase beta subunit, putat... 79 1e-13
UniRef50_Q01AE2 Cluster: Succinyl-CoA-ligase beta subunit; n=1; ... 79 2e-13
UniRef50_A0DJZ2 Cluster: Chromosome undetermined scaffold_53, wh... 77 5e-13
UniRef50_Q9RUY3 Cluster: Succinyl-CoA synthetase beta chain; n=6... 75 2e-12
UniRef50_Q23FR1 Cluster: Succinyl-CoA synthetase, beta subunit f... 75 2e-12
UniRef50_Q4L5U8 Cluster: Succinyl-CoA synthetase beta chain; n=2... 75 3e-12
UniRef50_Q9AB94 Cluster: Succinyl-CoA synthetase beta chain; n=1... 75 3e-12
UniRef50_Q9PHY1 Cluster: Succinyl-CoA synthetase beta chain; n=1... 73 1e-11
UniRef50_A3H5E3 Cluster: Succinyl-CoA synthetase, beta subunit; ... 70 9e-11
UniRef50_Q822A1 Cluster: Succinyl-CoA synthetase beta chain; n=7... 70 9e-11
UniRef50_Q7UKI3 Cluster: Succinyl-CoA synthetase beta chain; n=3... 69 2e-10
UniRef50_Q9EYG9 Cluster: Succinyl-CoA synthetase beta chain; n=3... 68 3e-10
UniRef50_Q8IQ64 Cluster: CG10622-PB, isoform B; n=1; Drosophila ... 68 4e-10
UniRef50_Q8Y1Y3 Cluster: Succinyl-CoA synthetase beta chain; n=6... 68 4e-10
UniRef50_A3W610 Cluster: Succinyl-CoA synthetase beta subunit; n... 67 5e-10
UniRef50_Q8NMK7 Cluster: Succinyl-CoA synthetase beta chain; n=4... 67 5e-10
UniRef50_Q2LW34 Cluster: Succinyl-CoA synthetase beta chain; n=1... 66 8e-10
UniRef50_P80886 Cluster: Succinyl-CoA synthetase beta chain; n=7... 66 8e-10
UniRef50_A1APQ8 Cluster: Succinyl-CoA synthetase, beta subunit; ... 65 2e-09
UniRef50_Q18UM6 Cluster: ATP-dependent carboxylate-amine ligase-... 65 3e-09
UniRef50_Q4W952 Cluster: Succinyl-CoA synthetase beta subunit, p... 65 3e-09
UniRef50_O28732 Cluster: Succinyl-CoA synthetase beta chain 1; n... 64 5e-09
UniRef50_Q8UC60 Cluster: Succinyl-CoA synthetase beta chain; n=2... 64 6e-09
UniRef50_Q9HPP1 Cluster: Succinyl-CoA synthetase beta chain; n=6... 63 8e-09
UniRef50_Q57663 Cluster: Succinyl-CoA synthetase beta chain; n=6... 63 1e-08
UniRef50_Q1AWI8 Cluster: Succinyl-CoA synthetase, beta subunit; ... 62 1e-08
UniRef50_Q6MBM7 Cluster: Probable succinate-CoA ligase (ADP-form... 62 2e-08
UniRef50_Q67LC8 Cluster: Succinyl-CoA synthetase beta subunit; n... 62 2e-08
UniRef50_Q64U25 Cluster: Succinyl-CoA synthetase beta chain; n=5... 62 2e-08
UniRef50_Q98EC5 Cluster: Succinyl-CoA synthetase beta chain; n=8... 62 2e-08
UniRef50_Q8G6B4 Cluster: Succinyl-CoA synthetase beta chain; n=3... 61 4e-08
UniRef50_Q1R3M2 Cluster: SucC, succinyl-CoA synthetase beta chai... 60 6e-08
UniRef50_Q3A7Y4 Cluster: Succinyl-CoA synthetase, beta subunit; ... 60 7e-08
UniRef50_Q8D2D7 Cluster: SucC protein; n=4; Gammaproteobacteria|... 59 2e-07
UniRef50_A3GUP8 Cluster: Succinyl-CoA synthetase beta chain; n=1... 59 2e-07
UniRef50_P45101 Cluster: Succinyl-CoA synthetase beta chain; n=1... 59 2e-07
UniRef50_Q8ZVF3 Cluster: Succinyl-CoA synthetase beta chain; n=8... 58 2e-07
UniRef50_Q2LPK9 Cluster: Succinyl-CoA synthetase beta chain; n=1... 58 3e-07
UniRef50_Q07LP6 Cluster: Succinate--CoA ligase; n=1; Rhodopseudo... 58 3e-07
UniRef50_Q18XG4 Cluster: ATP-dependent carboxylate-amine ligase-... 57 5e-07
UniRef50_UPI00015B9071 Cluster: UPI00015B9071 related cluster; n... 57 7e-07
UniRef50_A5CXM5 Cluster: Succinyl-CoA synthetase beta subunit; n... 57 7e-07
UniRef50_Q8TXE3 Cluster: Succinyl-CoA synthetase beta subunit; n... 56 2e-06
UniRef50_Q0PQT6 Cluster: Succinyl CoA ligase beta subunit; n=1; ... 55 2e-06
UniRef50_P0A839 Cluster: Succinyl-CoA synthetase beta chain; n=9... 55 2e-06
UniRef50_Q6ARL2 Cluster: Probable succinyl-CoA synthetase, beta ... 55 3e-06
UniRef50_A2SQQ5 Cluster: Succinyl-CoA synthetase, beta subunit; ... 54 6e-06
UniRef50_Q97C30 Cluster: Succinyl-CoA synthetase beta subunit; n... 53 1e-05
UniRef50_P72927 Cluster: Succinate--CoA ligase; n=3; Chroococcal... 52 1e-05
UniRef50_Q2V0P7 Cluster: Succinyl-CoA synthetase beta subunit; n... 51 4e-05
UniRef50_Q6LY86 Cluster: Succinate-CoA ligase (ADP-forming), bet... 51 4e-05
UniRef50_UPI0000F2DCF5 Cluster: PREDICTED: hypothetical protein;... 49 1e-04
UniRef50_Q7VR89 Cluster: Succinyl-CoA synthetase beta chain; n=2... 48 4e-04
UniRef50_Q110Z1 Cluster: Succinate--CoA ligase; n=2; Oscillatori... 47 7e-04
UniRef50_O67330 Cluster: Succinyl-CoA ligase beta subunit; n=4; ... 46 0.001
UniRef50_Q193A3 Cluster: ATP-dependent carboxylate-amine ligase-... 46 0.001
UniRef50_Q4J9C1 Cluster: Succinyl-CoA synthetase beta chain; n=4... 46 0.002
UniRef50_A7DNB3 Cluster: Succinate--CoA ligase; n=1; Candidatus ... 46 0.002
UniRef50_Q39YX4 Cluster: Succinyl-CoA synthetase beta subunit-li... 44 0.005
UniRef50_Q8YQB9 Cluster: Succinyl-CoA synthetase beta chain; n=4... 42 0.027
UniRef50_Q8R6L7 Cluster: UDP-N-acetylmuramyl tripeptide synthase... 41 0.048
UniRef50_Q8KDG1 Cluster: Citrate lyase, subunit1; n=11; Chlorobi... 41 0.048
UniRef50_A6LP53 Cluster: Succinate--CoA ligase; n=1; Thermosipho... 40 0.063
UniRef50_A0RTT8 Cluster: Succinyl-CoA synthetase, beta subunit; ... 40 0.11
UniRef50_Q1NU51 Cluster: Cyanophycin synthetase; n=3; delta prot... 39 0.15
UniRef50_A0GFR9 Cluster: CoA-binding; n=1; Burkholderia phytofir... 38 0.45
UniRef50_Q8ZTH6 Cluster: Putative uncharacterized protein PAE324... 38 0.45
UniRef50_Q58010 Cluster: Uncharacterized protein MJ0590; n=6; Me... 38 0.45
UniRef50_Q8DW15 Cluster: Glutathione biosynthesis bifunctional p... 38 0.45
UniRef50_Q9V1X5 Cluster: AcdB acetate--coA ligase (ADP-forming) ... 37 0.59
UniRef50_Q5V719 Cluster: Putative uncharacterized protein; n=1; ... 37 0.78
UniRef50_A0LDT1 Cluster: ATP-grasp domain protein; n=5; Proteoba... 36 1.4
UniRef50_A0DDG8 Cluster: Chromosome undetermined scaffold_46, wh... 36 1.4
UniRef50_A7HMU2 Cluster: Succinate--CoA ligase; n=1; Fervidobact... 36 1.8
UniRef50_Q73GS8 Cluster: Membrane protein, putative; n=13; Wolba... 35 2.4
UniRef50_Q1VJG9 Cluster: Succinyl-CoA synthetase, beta subunit; ... 35 2.4
UniRef50_P07244 Cluster: Bifunctional purine biosynthetic protei... 35 3.2
UniRef50_Q26CD7 Cluster: Putative nucleoside diphosphate sugar p... 34 4.2
UniRef50_Q0RTX1 Cluster: Putative carboxylase; n=1; Frankia alni... 34 4.2
UniRef50_Q653A4 Cluster: Basic helix-loop-helix-like; n=4; Oryza... 34 4.2
UniRef50_A1WYS2 Cluster: Phosphoribosylaminoimidazole carboxylas... 34 5.5
UniRef50_A1IDG9 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_A5C939 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_Q4J9J2 Cluster: Phosphoribosylaminoimidazole carboxylas... 34 5.5
UniRef50_A2SRS8 Cluster: CoA-binding domain protein; n=4; Methan... 34 5.5
UniRef50_P47661 Cluster: Uncharacterized protein MG422; n=4; Myc... 34 5.5
UniRef50_Q4SMD7 Cluster: Chromosome 3 SCAF14553, whole genome sh... 33 7.3
UniRef50_Q5P5S5 Cluster: Predicted Acetyl-CoA synthetase; n=4; P... 33 7.3
UniRef50_Q24FD5 Cluster: Protein kinase domain containing protei... 33 7.3
UniRef50_A2BMF5 Cluster: Conserved archaeal protein; n=2; Archae... 33 7.3
UniRef50_P77886 Cluster: Carbamoyl-phosphate synthase pyrimidine... 33 7.3
UniRef50_Q4SK98 Cluster: Chromosome 13 SCAF14566, whole genome s... 33 9.6
UniRef50_Q47X73 Cluster: Pyridoxamine 5'-phosphate oxidase / oxi... 33 9.6
UniRef50_O69824 Cluster: Putative uncharacterized protein SCO643... 33 9.6
UniRef50_Q1I3D8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_Q18UC2 Cluster: Cyanophycin synthetase; n=2; Desulfitob... 33 9.6
UniRef50_Q08NX5 Cluster: Xylosidase/arabinosidase; n=1; Stigmate... 33 9.6
UniRef50_A6S124 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_O32321 Cluster: Pesticidal crystal protein cry20Aa (Ins... 33 9.6
>UniRef50_Q9P2R7 Cluster: Succinyl-CoA ligase [ADP-forming]
beta-chain, mitochondrial precursor; n=82; cellular
organisms|Rep: Succinyl-CoA ligase [ADP-forming]
beta-chain, mitochondrial precursor - Homo sapiens
(Human)
Length = 463
Score = 118 bits (284), Expect = 2e-25
Identities = 56/100 (56%), Positives = 79/100 (79%)
Frame = +1
Query: 163 KQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGR 342
+QQ R+L++HEY+S LL++ G+ VPK VAK+ DEA A +L +KD+V+KAQVLAGGR
Sbjct: 47 QQQQRNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGR 106
Query: 343 GKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
GKGTF++GLKGGV++V +PE A ++ +M+ + L TKQTG
Sbjct: 107 GKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTG 146
Score = 118 bits (284), Expect = 2e-25
Identities = 61/114 (53%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
YY AI MERSF GPV+I SS GGVNIEDVAAE+P+A+ EPIDI GI +Q ++ +K+
Sbjct: 167 YYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKM 226
Query: 705 GLQEFATE--AHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFD 860
G E A M+ K+Y LFLK DA +IE+NP D+ G C+DAK FD
Sbjct: 227 GFPPNIVESAAENMV-KLYSLFLKYDATMIEINPMVEDS-DGAVLCMDAKINFD 278
Score = 35.5 bits (78), Expect = 1.8
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2
Query: 461 GAAGRICNMVMVTERKFPRR 520
G GRICN V+V ERK+PRR
Sbjct: 146 GEKGRICNQVLVCERKYPRR 165
>UniRef50_A0F011 Cluster: Succinate-CoA ligase ADP-forming beta
subunit; n=1; Scophthalmus maximus|Rep: Succinate-CoA
ligase ADP-forming beta subunit - Scophthalmus maximus
(Turbot)
Length = 188
Score = 114 bits (275), Expect = 2e-24
Identities = 56/108 (51%), Positives = 80/108 (74%)
Frame = +1
Query: 139 SSANKFPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLK 318
+S + +QQ R+L++HEY+S LL++ GI VP VA + +EA A ++ +KD+V+K
Sbjct: 41 ASQLQLQQQQQQRNLSLHEYMSIGLLKEAGISVPVGLVASSSEEAYAVAKQIGSKDLVVK 100
Query: 319 AQVLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
AQVLAGGRGKGTF+ GLKGGV++V +PE A DI+ +M+ + L TKQTG
Sbjct: 101 AQVLAGGRGKGTFEGGLKGGVKIVYSPEEARDISSQMIGRKLYTKQTG 148
Score = 35.1 bits (77), Expect = 2.4
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 461 GAAGRICNMVMVTERKFPRR 520
G AGRICN V + ER++PRR
Sbjct: 148 GEAGRICNQVFICERRYPRR 167
Score = 34.7 bits (76), Expect = 3.2
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASS 584
YY AI MERSF GPV+I SS
Sbjct: 169 YYFAITMERSFQGPVLIGSS 188
>UniRef50_Q96I99 Cluster: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor; n=55; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor - Homo sapiens
(Human)
Length = 432
Score = 112 bits (269), Expect = 1e-23
Identities = 56/113 (49%), Positives = 75/113 (66%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y+AI+M+RS NGPV++ S QGGV+IE+VAA NP+ + E IDI GI D Q R+ E +G
Sbjct: 153 YLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLG 212
Query: 708 -LQEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+ ++A I K+Y+LFLK DA +EVNP+ + GQ C DAK FDD
Sbjct: 213 FVGPLKSQAADQITKLYNLFLKIDATQVEVNPFG-ETPEGQVVCFDAKINFDD 264
Score = 104 bits (250), Expect = 3e-21
Identities = 51/95 (53%), Positives = 66/95 (69%)
Frame = +1
Query: 175 RHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGT 354
R LN+ EY S L+ D+G+ V +F VA T +EA++ A LN K+IVLKAQ+LAGGRGKG
Sbjct: 36 RWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRLNAKEIVLKAQILAGGRGKGV 95
Query: 355 FKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQT 459
F +GLKGGV + P V G +A +M+ L TKQT
Sbjct: 96 FNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQT 130
>UniRef50_Q6PHH4 Cluster: Suclg2 protein; n=8; cellular
organisms|Rep: Suclg2 protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 419
Score = 108 bits (260), Expect = 2e-22
Identities = 54/113 (47%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y AI+M+RS NGPV++ S QGG++IE+VAA P+ + E IDI G+ DDQ R+ +G
Sbjct: 140 YFAILMDRSCNGPVMVGSPQGGMDIEEVAAATPELIFKEVIDIFEGVRDDQALRMAANLG 199
Query: 708 LQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+ +A IK++YDLFLK DA +EVNP + GQ C DAK FDD
Sbjct: 200 FKGPLERQAADQIKRLYDLFLKVDATQVEVNPLG-ETPEGQVVCFDAKINFDD 251
Score = 105 bits (253), Expect = 1e-21
Identities = 52/95 (54%), Positives = 65/95 (68%)
Frame = +1
Query: 175 RHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGT 354
R LN+ EY S L++D G+ V +F VA T EA++ A L K+IVLKAQ+LAGGRGKG
Sbjct: 23 RWLNLQEYQSKKLMQDSGVAVQRFFVADTASEALEAAKRLKAKEIVLKAQILAGGRGKGV 82
Query: 355 FKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQT 459
F +GLKGGV + P V G++A KML L TKQT
Sbjct: 83 FNSGLKGGVHLTKDPAVVGELASKMLGYNLTTKQT 117
>UniRef50_P53312 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
beta, mitochondrial precursor; n=23; Fungi/Metazoa
group|Rep: Succinyl-CoA ligase [ADP-forming] subunit
beta, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 427
Score = 105 bits (252), Expect = 1e-21
Identities = 53/108 (49%), Positives = 70/108 (64%)
Frame = +1
Query: 139 SSANKFPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLK 318
S N + Q RHL++HEY S LLR++GI P+ A T +EA + A +LNT +V+K
Sbjct: 17 SRLNAQAALQARRHLSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKLNTNKLVIK 76
Query: 319 AQVLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
AQ L GGRGKG F G K GV M+ +P+ A D+A +ML L+TKQTG
Sbjct: 77 AQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTG 124
Score = 82.2 bits (194), Expect = 2e-14
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y++I+M+R P+IIASSQGG+NIE+VA PDA+ I+ G++ V + +G
Sbjct: 146 YLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLG 205
Query: 708 LQEFA-TEAHGMIKKMYDLFLKXDALLIEVNPYA--XDALTGQFFCLDAKFRFDD 863
A EA + +Y +F++ DA +E+NP + T + C DAKF FDD
Sbjct: 206 FSPDAQDEAAKAVSNLYKIFMERDATQVEINPLSEIEHDPTHKIMCTDAKFGFDD 260
>UniRef50_O82662 Cluster: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor; n=35; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 421
Score = 101 bits (243), Expect = 2e-20
Identities = 57/117 (48%), Positives = 79/117 (67%), Gaps = 3/117 (2%)
Frame = +1
Query: 121 NKILTAS-SANKFPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATEL- 294
NK+++ S S + QQ+R LN+HEY L+ +G+ VPK A + +E K ++
Sbjct: 6 NKLVSRSLSISGKWQNQQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVF 65
Query: 295 -NTKDIVLKAQVLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
N ++V+K+Q+LAGGRG GTFK+GLKGGV +V E A +IAGKML Q+LVTKQTG
Sbjct: 66 PNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRDE-AEEIAGKMLGQVLVTKQTG 121
Score = 89.8 bits (213), Expect = 8e-17
Identities = 43/113 (38%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y +I+++R GP+IIA +GG +IED+A + PD + PID+ +GITD+ +V++ +
Sbjct: 143 YFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDGLA 202
Query: 708 LQEF-ATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+ ++ +KK+Y+LF K D ++E+NP A + T Q DAK FDD
Sbjct: 203 PKAADRKDSIEQVKKLYELFRKTDCTMLEINPLA-ETSTNQLVAADAKLNFDD 254
>UniRef50_Q5T9Q8 Cluster: Succinate-CoA ligase, ADP-forming, beta
subunit; n=3; Eutheria|Rep: Succinate-CoA ligase,
ADP-forming, beta subunit - Homo sapiens (Human)
Length = 154
Score = 100 bits (239), Expect = 6e-20
Identities = 52/102 (50%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Frame = +3
Query: 561 GPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIGLQEFATE--AH 734
GPV+I SS GGVNIEDVAAE+P+A+ EPIDI GI +Q ++ +K+G E A
Sbjct: 31 GPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAE 90
Query: 735 GMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFD 860
M+ K+Y LFLK DA +IE+NP D+ G C+DAK FD
Sbjct: 91 NMV-KLYSLFLKYDATMIEINPMVEDS-DGAVLCMDAKINFD 130
>UniRef50_Q5DBL2 Cluster: SJCHGC05557 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05557 protein - Schistosoma
japonicum (Blood fluke)
Length = 177
Score = 99.5 bits (237), Expect = 1e-19
Identities = 47/113 (41%), Positives = 69/113 (61%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
+Y+AI+++RS GPV++ QGGVNIED+A +NPDA+ PIDI G+ + K+
Sbjct: 33 HYLAIVLDRSSGGPVMVGCKQGGVNIEDIARDNPDALIKIPIDIDKGLDKKDAVMMAHKL 92
Query: 705 GLQEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
G + EA I+++Y LF D L+E+NP + D + G C+D K FDD
Sbjct: 93 GFSH-SDEAAVYIERLYKLFDSTDCTLLEINPISQD-INGHVICMDCKMNFDD 143
>UniRef50_A0BED7 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=5;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_102, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 449
Score = 93.1 bits (221), Expect = 8e-18
Identities = 42/112 (37%), Positives = 70/112 (62%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y+A +++R+ P I+AS GG+ IE+VA +P+++ PIDI +G+TD +V++ +
Sbjct: 159 YLAFILDRNSQKPAIVASINGGMEIEEVAKTDPNSIIVLPIDINTGLTDQIANKVVDTLQ 218
Query: 708 LQEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
LQ +A ++ +Y +F+ DA +E+NP+A D Q FC+DAK DD
Sbjct: 219 LQSVRQQAVEQLRNLYKMFISLDATQVEINPWATDP-KNQLFCIDAKINVDD 269
Score = 78.6 bits (185), Expect = 2e-13
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +1
Query: 172 VRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKD-IVLKAQVLAGGRGK 348
V+ ++HEY S L+R + V K +A D+A K A L+ ++LK+QV AGGRGK
Sbjct: 40 VKCFDLHEYQSKDLMRGFNVRVQKGAIALNADDAAKVAKTLDPSGGLILKSQVHAGGRGK 99
Query: 349 GTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQT 459
GT +GLKGGV++ TPE + +M+ LVT QT
Sbjct: 100 GTLSSGLKGGVKICKTPEEVANYTKQMIGYKLVTHQT 136
>UniRef50_Q8ILE9 Cluster: ATP-specific succinyl-CoA synthetase beta
subunit, putative; n=9; Plasmodium|Rep: ATP-specific
succinyl-CoA synthetase beta subunit, putative -
Plasmodium falciparum (isolate 3D7)
Length = 462
Score = 89.0 bits (211), Expect = 1e-16
Identities = 54/130 (41%), Positives = 74/130 (56%), Gaps = 15/130 (11%)
Frame = +1
Query: 118 GNKILTASSANKFPSKQQV----------RHLNVHEYISYTLLRDHGIPVPKFNVAKTKD 267
GNKI+ + N F K+ + R+L++HEY+S LLR H +P P+ AKT +
Sbjct: 19 GNKIIWGRTNNFFYKKEYIFSSFRNNIGKRYLSIHEYLSVDLLRSHNVPCPEGYAAKTAE 78
Query: 268 EAIKFATELNT----KDIVLKAQVLAGGRGKGTFK-NGLKGGVRMVNTPEVAGDIAGKML 432
EA + A L D+V+KAQVL+GGRG G FK N +GGV + +IA KML
Sbjct: 79 EAEEKALLLQNVCGDNDLVIKAQVLSGGRGVGYFKENNFEGGVHVCRNSMEVKEIATKML 138
Query: 433 KQLLVTKQTG 462
L+TKQ+G
Sbjct: 139 NNTLITKQSG 148
Score = 80.6 bits (190), Expect = 5e-14
Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y+A +++R+ +G +++ SS GG +IED+ +NPDA+ IDI +G+T Q E IG
Sbjct: 170 YIAFLLDRNSDGIILLGSSIGGSSIEDIIKKNPDAIYKLNIDINNGLTTGQAREFSENIG 229
Query: 708 LQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+ + MI +Y +F K D L+E+NP + + G+ C DAK FDD
Sbjct: 230 FKNDQLNIVTDMIVNLYKVFKKYDCTLLEINPLS-ELNDGRVLCCDAKLNFDD 281
>UniRef50_Q1KSE5 Cluster: Mitochondrial putative ATP-specific
succinyl-CoA synthetase beta subunit; n=1; Toxoplasma
gondii|Rep: Mitochondrial putative ATP-specific
succinyl-CoA synthetase beta subunit - Toxoplasma gondii
Length = 498
Score = 85.8 bits (203), Expect = 1e-15
Identities = 51/110 (46%), Positives = 69/110 (62%), Gaps = 10/110 (9%)
Frame = +1
Query: 163 KQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKT----KDEAIKFATELNTKD-----IVL 315
++Q R LN+HEY S ++++ I PKF VA T + EA F +E + D V+
Sbjct: 66 REQRRFLNLHEYQSMRIMKEFHITTPKFAVASTAKEAEQEAATFLSESPSGDGEPVDFVV 125
Query: 316 KAQVLAGGRGKGTFK-NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
KAQVLAGGRG G F+ NG +GGV++ +P G +A KML + LVTKQTG
Sbjct: 126 KAQVLAGGRGLGFFRENGYQGGVQVCESPREVGIVAEKMLGKTLVTKQTG 175
Score = 82.2 bits (194), Expect = 2e-14
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
YVAI+M+R GP++I S++GG +IED+A P+++ PIDI GI++ ++ E +G
Sbjct: 197 YVAILMDRGAGGPILIGSARGGTSIEDIAHNYPESIHKMPIDINQGISEPRLREFAELLG 256
Query: 708 LQEFATEAH-GMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
EA I+ +Y+LF D IEVNP + G+ DAK FDD
Sbjct: 257 FSGDRLEAACQCIRGLYELFRSKDCTQIEVNPLV-ETHDGRVLVCDAKLNFDD 308
>UniRef50_UPI0000DB7A0E Cluster: PREDICTED: similar to Sucb
CG10622-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to Sucb CG10622-PA, isoform A - Apis
mellifera
Length = 370
Score = 84.6 bits (200), Expect = 3e-15
Identities = 44/115 (38%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIE-KI 704
Y+ I+M+R +NGPV+IAS GG++IE VA +NP+ + P+DI GI DD+I + + +
Sbjct: 144 YICILMDRQYNGPVLIASPAGGMDIETVAEKNPELIKTIPLDIYYGI-DDEIAKDVSIFL 202
Query: 705 GLQEFATEAHGM--IKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
G + + + +K ++ LF+ DAL +E+NP + Q +DAK FDD
Sbjct: 203 GFMDPTVQQKAIYELKNLWKLFVDIDALQVEINPLV-ETTDNQVIAVDAKISFDD 256
Score = 84.2 bits (199), Expect = 4e-15
Identities = 45/100 (45%), Positives = 58/100 (58%)
Frame = +1
Query: 160 SKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGG 339
S +Q R+LN+ EY S LLRD G+ V F + ++A L+ + V+KAQVLAGG
Sbjct: 22 SIKQTRNLNLLEYQSKELLRDCGVSVQNFAIVDDLNKANSALQNLHANEYVIKAQVLAGG 81
Query: 340 RGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQT 459
RGKG F NG KGGV + + D+ ML L TKQT
Sbjct: 82 RGKGWFDNGFKGGVHLTKDRKAVIDVVKNMLGHRLFTKQT 121
>UniRef50_Q03184 Cluster: Succinyl-CoA ligase [GDP-forming]
beta-chain, hydrogenosomal precursor; n=7; Trichomonas
vaginalis|Rep: Succinyl-CoA ligase [GDP-forming]
beta-chain, hydrogenosomal precursor - Trichomonas
vaginalis
Length = 407
Score = 84.2 bits (199), Expect = 4e-15
Identities = 45/114 (39%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y AI+++R PV+IAS++GGV IE+VAA +P+ + +D V GIT++ + K+G
Sbjct: 126 YFAILLDRQTQSPVVIASTEGGVEIEEVAAHHPEKIHKFVLDGVEGITEEVAKNISTKLG 185
Query: 708 LQEFATEAHGMI--KKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
L A + +G++ +K++ LF+ DA +EVNP A + G+ +D+KF FDD
Sbjct: 186 LTGKAYD-NGVVEMQKLWKLFVGSDATQVEVNPLA-ETTDGRIITVDSKFNFDD 237
Score = 64.1 bits (149), Expect = 5e-09
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Frame = +1
Query: 160 SKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGG 339
S R+ N+ E+ S + + + VA++ +EA + ++N V+KAQV GG
Sbjct: 3 SSSFARNFNILEWQSKEICAKYNVAAGINLVARSPEEAAEAFRKMNLPAAVIKAQVYCGG 62
Query: 340 RGKGTF-KNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
RGKG + + G K GV V + + A IA +ML LVTKQTG
Sbjct: 63 RGKGHWLETGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTG 104
>UniRef50_Q4N7Z3 Cluster: ATP-specific succinyl-CoA synthetase beta
subunit, putative; n=1; Theileria parva|Rep:
ATP-specific succinyl-CoA synthetase beta subunit,
putative - Theileria parva
Length = 453
Score = 83.8 bits (198), Expect = 5e-15
Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Frame = +1
Query: 163 KQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATEL----NTKDIVLKAQVL 330
K R LNV EYI T+L+ +G+ VP+F A T +EA + + NT ++V+KA VL
Sbjct: 24 KLSKRFLNVSEYIGMTILKRNGVRVPEFRNATTPEEAFEAGKSIQQLTNTPELVVKALVL 83
Query: 331 AGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGG 465
GGRGKGTF G K GV +V +P A ML L TKQT G
Sbjct: 84 TGGRGKGTFNTGFK-GVEIVKSPSEVSACARGMLGNYLTTKQTVG 127
Score = 62.5 bits (145), Expect = 1e-08
Identities = 29/92 (31%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y++ ++R G V IA+ GG N+E++A ++PDA+ I ++G+T + +++++
Sbjct: 148 YLSFTLDRGSGGIVAIATKHGGGNVEEIAHQHPDAVLTLQISPLTGLTPELTELLVKQLS 207
Query: 708 LQEFATE-AHGMIKKMYDLFLKXDALLIEVNP 800
TE ++++YD F+K D L+EVNP
Sbjct: 208 FSNEVTEQVKKTVQQLYDTFVKSDGTLLEVNP 239
>UniRef50_Q4UHL1 Cluster: Succinyl-coA ligase, subunit, putative;
n=1; Theileria annulata|Rep: Succinyl-coA ligase,
subunit, putative - Theileria annulata
Length = 433
Score = 82.6 bits (195), Expect = 1e-14
Identities = 46/101 (45%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Frame = +1
Query: 175 RHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNT----KDIVLKAQVLAGGR 342
R LNV EYI T+L+ +G+ VP+F A T +EA + + + ++V+KA VL GGR
Sbjct: 34 RWLNVSEYIGMTVLKRNGVRVPEFRSATTPEEAFEASKSIQQVTGKPELVIKALVLTGGR 93
Query: 343 GKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGG 465
GKG F N GV +VN+PE A + A ML L TKQT G
Sbjct: 94 GKGVFSNTGFKGVEVVNSPESASECAKGMLGNYLTTKQTVG 134
Score = 67.3 bits (157), Expect = 5e-10
Identities = 32/113 (28%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y++ ++R G V IA+ GG N+E++A E PD++ + ++G+TD+ ++++++
Sbjct: 155 YLSFTLDRGSGGIVAIATKHGGGNVEEIAHEYPDSVLTLSVSPLTGLTDENTEQLVKQLS 214
Query: 708 LQE-FATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
E + +K++Y+ F++ D L+EVNP + +G+ D+K DD
Sbjct: 215 FTENVRDQVVAAVKQIYNTFVQFDGTLLEVNPLV-ETDSGEILACDSKLIVDD 266
>UniRef50_A7AS83 Cluster: Succinly CoA-ligase beta subunit,
putative; n=1; Babesia bovis|Rep: Succinly CoA-ligase
beta subunit, putative - Babesia bovis
Length = 436
Score = 79.0 bits (186), Expect = 1e-13
Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
Frame = +1
Query: 175 RHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATEL--NTK--DIVLKAQVLAGGR 342
R+LNV E+ +L++HGIP P +A++ EA E+ +TK ++VLKA VL GGR
Sbjct: 37 RYLNVPEFGGMRILKEHGIPTPMNRLARSPSEAEAMTHEILESTKCGEVVLKALVLTGGR 96
Query: 343 GKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGGS 468
GKG F GV + +PE A +A M+ +LVTKQTG S
Sbjct: 97 GKGKFVGTDISGVELAKSPERAKTLAEGMIGNVLVTKQTGAS 138
Score = 70.1 bits (164), Expect = 7e-11
Identities = 34/113 (30%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y++ M++RS + IA+ GG N+E+V+ ++P A+ I+ + GITDD++ ++ +
Sbjct: 158 YISFMLDRSSCSIMAIATKHGGGNVEEVSEKDPSAVLTVKINPLKGITDDEVTKIATHLD 217
Query: 708 LQE-FATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+ + +K MY F+ DALL+E+NP + + + D+K DD
Sbjct: 218 FSKGLLEDTKSFVKNMYHAFVAKDALLLEINPLS-ETENSKLVACDSKVIIDD 269
>UniRef50_Q01AE2 Cluster: Succinyl-CoA-ligase beta subunit; n=1;
Ostreococcus tauri|Rep: Succinyl-CoA-ligase beta subunit
- Ostreococcus tauri
Length = 203
Score = 78.6 bits (185), Expect = 2e-13
Identities = 43/96 (44%), Positives = 57/96 (59%)
Frame = +1
Query: 175 RHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGT 354
RHLNVHEY ++ +G+ VP T D+ L +++V+K+Q+LAGGRG GT
Sbjct: 22 RHLNVHEYQGAEIMMKNGVRVPIGVACATLDDVDAACDALRGREVVVKSQILAGGRGLGT 81
Query: 355 FKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
F +G GGV +V E A A KML LVTKQ+G
Sbjct: 82 FASGFAGGVHVVAKTE-ARATAEKMLGGTLVTKQSG 116
Score = 62.1 bits (144), Expect = 2e-08
Identities = 26/63 (41%), Positives = 46/63 (73%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y A+M++R+ GP++IAS++GG +IED+AA P+ + +DIV G+T Q ++EK+G
Sbjct: 138 YFALMLDRASAGPLVIASAEGGTSIEDLAATQPEKIIKMRLDIVKGMTRPQADELVEKLG 197
Query: 708 LQE 716
+++
Sbjct: 198 VKK 200
>UniRef50_A0DJZ2 Cluster: Chromosome undetermined scaffold_53, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_53, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 429
Score = 77.4 bits (182), Expect = 5e-13
Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 9/103 (8%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFA-------TELNT-KDIVLKAQVLAG 336
L++HEY + + +P+P + KT DEA K A +E N+ D+V+KAQ G
Sbjct: 12 LSLHEYQTAEFFKSFQLPIPPGKICKTPDEAYKAAIKIIQEGSERNSFTDLVVKAQCHTG 71
Query: 337 GRGKGTFK-NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
GRGKG FK NG G+ +V+ PE + A KML L+TKQTG
Sbjct: 72 GRGKGYFKENGFNSGIHIVSNPEDVKEYASKMLGNTLITKQTG 114
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEP---IDIVSGITDDQICRVIE 698
Y++I+++R+ G I+AS +GG++IE+ + E +D + + + +V +
Sbjct: 136 YLSILLDRNTGGLGIVASEKGGIHIEESDPNYIKKFSIEMPNNVDEIDFSIYENVSKVYK 195
Query: 699 KIGLQEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+Q + ++KKM+D+FL+ DA L+E+NP D L G D K DD
Sbjct: 196 LNPIQH--NQMKDILKKMFDIFLQTDATLLEINPLGID-LQGNLIICDQKLNIDD 247
>UniRef50_Q9RUY3 Cluster: Succinyl-CoA synthetase beta chain; n=6;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Deinococcus radiodurans
Length = 386
Score = 75.4 bits (177), Expect = 2e-12
Identities = 40/113 (35%), Positives = 64/113 (56%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
YYV ++++R+ ++AS++GG+ IE+VAA NP+ + +D V+G+ + V K
Sbjct: 102 YYVGMIVDRNVQSYTLMASAEGGMEIEEVAATNPEKIIRHRVDPVTGLRPYEAREVAIKA 161
Query: 705 GLQEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
G + + M+ KM L+ DA+L+E+NP DA G LD KF DD
Sbjct: 162 GFRGNLNKIADMMVKMSKAALERDAVLVEINPLFVDA-DGTPIALDTKFEIDD 213
Score = 50.8 bits (116), Expect = 4e-05
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGK-GTF 357
+ +HEY +LRD G+ V VA T +E E + +V+KAQV GGRGK G
Sbjct: 1 MKLHEYQGKEVLRDFGVNVQDGKVATTPEEVQAIYKEYG-QPVVVKAQVHVGGRGKAGGV 59
Query: 358 KNGLKGGVRMVNTPEVAG-DIAGKMLKQLLVTK 453
K + N + G DI G + ++LVTK
Sbjct: 60 KYSANEDKALENAKNILGMDIKGLTVNKVLVTK 92
>UniRef50_Q23FR1 Cluster: Succinyl-CoA synthetase, beta subunit
family protein; n=2; cellular organisms|Rep:
Succinyl-CoA synthetase, beta subunit family protein -
Tetrahymena thermophila SB210
Length = 534
Score = 74.9 bits (176), Expect = 2e-12
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 13/105 (12%)
Frame = +1
Query: 187 VHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATEL-NTK-----------DIVLKAQVL 330
+HEY LL+ + +PV +VA + ++A+ A +L N+K D V+KAQ+
Sbjct: 82 LHEYQVMDLLQKYDLPVISGSVATSAEQALNVAQQLKNSKPTNQSQGITFTDFVVKAQIH 141
Query: 331 AGGRGKGTFK-NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
AGGRGKG FK NG++ GV+ +P+ DIA KML + L+TKQTG
Sbjct: 142 AGGRGKGFFKENGMQSGVQFATSPQEVKDIAEKMLGKTLITKQTG 186
Score = 58.8 bits (136), Expect = 2e-07
Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y+AI ++R G VII + +GGVNIE ++ ++ +++ G+T + + + +
Sbjct: 244 YLAITLDRKQGGVVIICNERGGVNIEQ---QDESSVKTHFVNVHEGLTQQTLDDISKSLN 300
Query: 708 L-QEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
L ++ + H ++K +Y F + D+ L+E+NP + G+ D K DD
Sbjct: 301 LGSQYNDQLHKIVKGLYKCFSETDSTLLEINPLGL-TIDGKLLICDQKMNVDD 352
>UniRef50_Q4L5U8 Cluster: Succinyl-CoA synthetase beta chain; n=21;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Staphylococcus haemolyticus (strain JCSC1435)
Length = 388
Score = 74.5 bits (175), Expect = 3e-12
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
YYV +++R+ + ++AS +GG IE+VAA+ P+ + E ID V G++ Q R+ I
Sbjct: 108 YYVGFVIDRATDRITLMASEEGGTEIEEVAAKTPEKIFKETIDPVVGLSPYQARRIAFNI 167
Query: 705 GL-QEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+ +E +A + +Y++F++ D ++E+NP G+ LDAK FDD
Sbjct: 168 NIPKESINKAAKFLISLYNVFIEKDCSIVEINPLVTTG-EGEVLALDAKINFDD 220
Score = 67.7 bits (158), Expect = 4e-10
Identities = 38/94 (40%), Positives = 56/94 (59%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+N+HEY + R G+ VP+ VA T +EA++ A EL+T+ V+KAQ+ AGGRGK
Sbjct: 1 MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELDTEIYVVKAQIHAGGRGKA--- 57
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
GGV++ + A ++L + LVT QTG
Sbjct: 58 ----GGVKIAKSLSEVETYANELLGKQLVTHQTG 87
>UniRef50_Q9AB94 Cluster: Succinyl-CoA synthetase beta chain; n=155;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 399
Score = 74.5 bits (175), Expect = 3e-12
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+N+HE+ + +L + G PVP+ A T DEA A +L V+K+Q+ AGGRGKG F+
Sbjct: 1 MNIHEHQAKAVLAEFGAPVPRGFAAFTPDEAAAAAEKLGGPVFVVKSQIHAGGRGKGKFE 60
Query: 361 N---GLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
KGGVR+V + E A +ML ++LVT QTG
Sbjct: 61 GLGPDAKGGVRVVKSVEEVRSNAEEMLGRVLVTHQTG 97
Score = 64.9 bits (151), Expect = 3e-09
Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +3
Query: 504 GSSHAGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQI 683
G++ A +Y++++++R+ + ++AS++GG++IEDVA P+ + ID +G+
Sbjct: 111 GAAIAKEFYLSLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPATGVWPTHH 170
Query: 684 CRVIEKIGLQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFD 860
+ + +GL A EA ++ ++Y F+ D ++E+NP A LDAK FD
Sbjct: 171 RALAKALGLTGGLAKEAASLLNQLYTAFMAKDMAMLEINPLIVTA-DDHLRVLDAKLSFD 229
>UniRef50_Q9PHY1 Cluster: Succinyl-CoA synthetase beta chain; n=14;
Campylobacter|Rep: Succinyl-CoA synthetase beta chain -
Campylobacter jejuni
Length = 387
Score = 72.9 bits (171), Expect = 1e-11
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Frame = +3
Query: 504 GSSHAGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQI 683
G++ YY+AI+ R IIASS+GG++IE VA E+P+ + ID G
Sbjct: 101 GANIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHG 160
Query: 684 CRVIEKIGL-QEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFD 860
V +GL ++ + MI K+Y L++ D ++E+NP A G F+ LDAK FD
Sbjct: 161 LEVARVLGLDKDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTA-EGDFYALDAKCSFD 219
Query: 861 D 863
D
Sbjct: 220 D 220
Score = 64.5 bits (150), Expect = 3e-09
Identities = 39/94 (41%), Positives = 52/94 (55%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+N+HEY + + D+GIP K VA + DEA+ A EL +KAQ+ AGGRG G
Sbjct: 1 MNIHEYQAKAIFVDNGIPTLKGKVAFSVDEAVANAKELGGSVWAVKAQIHAGGRGLG--- 57
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
GGV++ + D A K+L LVT QTG
Sbjct: 58 ----GGVKIAKNLDEVKDYASKILGMNLVTHQTG 87
>UniRef50_A3H5E3 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Caldivirga maquilingensis IC-167|Rep: Succinyl-CoA
synthetase, beta subunit - Caldivirga maquilingensis
IC-167
Length = 377
Score = 69.7 bits (163), Expect = 9e-11
Identities = 38/114 (33%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
YYV++ ++RS +I+AS +GGV+IE++A +P+ + I G+ D + + + +
Sbjct: 98 YYVSVTIDRSSRTFIILASPEGGVDIEEIARTSPEKIYRGRIHPFEGLRDYTVNAINKFM 157
Query: 705 GLQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
G E A++ +++ MY++F DA L+E+NP A G F LD K DD
Sbjct: 158 GFTGELASKFASLLRIMYNVFETYDAELVEINPLAL-TRDGNFVALDVKIMIDD 210
>UniRef50_Q822A1 Cluster: Succinyl-CoA synthetase beta chain; n=7;
Chlamydiaceae|Rep: Succinyl-CoA synthetase beta chain -
Chlamydophila caviae
Length = 388
Score = 69.7 bits (163), Expect = 9e-11
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
Frame = +3
Query: 516 AGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVI 695
A YY+A++M+R P I+ S GGV+IE+VA + PD + P+ + + + QI ++I
Sbjct: 105 AAEYYLAVIMDRKNRCPAIMLSKAGGVDIEEVAQKYPDQLLTVPLTPFARLYNYQIRQII 164
Query: 696 EKIGLQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+ + + + + +IKK+ F DA L+E+NP G LDAK DD
Sbjct: 165 KFMNWEGDIRKQGAQLIKKLVQCFYDNDASLLEINPLVL-TQEGDLLVLDAKITIDD 220
Score = 50.0 bits (114), Expect = 8e-05
Identities = 32/95 (33%), Positives = 48/95 (50%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+++HEY + LL + I +P + VA + +E + EL V+K QV AGGRGK
Sbjct: 1 MHLHEYQAKDLLVSYDIAIPPYRVASSVEEGQQALKELAIDAGVVKVQVHAGGRGK---- 56
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGG 465
GGV + +P K+L+ V+ QT G
Sbjct: 57 ---NGGVVVAKSPSDILAAVDKLLRMRFVSNQTSG 88
>UniRef50_Q7UKI3 Cluster: Succinyl-CoA synthetase beta chain; n=3;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Rhodopirellula baltica
Length = 394
Score = 68.5 bits (160), Expect = 2e-10
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Frame = +3
Query: 504 GSSHAGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQI 683
G A Y+ I+++R+ + PV++ S++GGV IE VA E P+ + E D G+ Q+
Sbjct: 109 GCDIARELYLGIVVDRAGSKPVLMVSTEGGVEIETVAEETPELIFKEHFDPAVGLDGFQV 168
Query: 684 CRVIEKIGLQEFATE-AHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFD 860
++ +K+G++ A + A+ + M F+ D + E+NP G+ LDAK FD
Sbjct: 169 RKLCKKLGIEGAAAKSAYKFMTAMCRFFVDFDCEMAEINPLVITG-DGEMVALDAKIIFD 227
Query: 861 D 863
+
Sbjct: 228 E 228
Score = 61.7 bits (143), Expect = 2e-08
Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKG-TF 357
+ +HEY L R G+PV ++ T DEA +L K V+KAQ+ AGGRGKG
Sbjct: 1 MKIHEYQGKQLFRTAGVPVLDGHMVTTPDEAAAAYDKLGGKIAVVKAQIHAGGRGKGNVI 60
Query: 358 KNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
N + GV +V + E A A +L + LVT QTG
Sbjct: 61 DNPDQKGVVLVKSAEEAKAAAEGLLGKKLVTIQTG 95
>UniRef50_Q9EYG9 Cluster: Succinyl-CoA synthetase beta chain; n=34;
cellular organisms|Rep: Succinyl-CoA synthetase beta
chain - Rhizobium meliloti (Sinorhizobium meliloti)
Length = 398
Score = 68.1 bits (159), Expect = 3e-10
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+N+HEY + LL+ +G PV + + DEA A +L V+K+Q+ AGGRGKG FK
Sbjct: 1 MNIHEYQAKALLKSYGAPVAEGVAIFSADEAEAAAKKLPGPLYVVKSQIHAGGRGKGKFK 60
Query: 361 N---GLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
KGGVR+ + + A ML LVTKQTG
Sbjct: 61 ELGPDAKGGVRLAKSVDEVVANAKDMLGNTLVTKQTG 97
Score = 61.3 bits (142), Expect = 3e-08
Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y++I+++RS + S++GG++IE VA P+ + ID G+T + + + + +
Sbjct: 119 YLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPEKGVTAENLKTLADALK 178
Query: 708 LQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFD 860
L+ E +A + +Y F++ D L+EVNP G+ LDAK FD
Sbjct: 179 LEGEARADAEKLFPILYKAFVEKDMSLLEVNPLIV-MTNGRMRVLDAKVSFD 229
>UniRef50_Q8IQ64 Cluster: CG10622-PB, isoform B; n=1; Drosophila
melanogaster|Rep: CG10622-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 112
Score = 67.7 bits (158), Expect = 4e-10
Identities = 33/83 (39%), Positives = 48/83 (57%)
Frame = +1
Query: 139 SSANKFPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLK 318
++A K VR+LN+ E+ S LL+ +G+ + +F V + + V+K
Sbjct: 9 TTARHIVHKVPVRNLNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFECPEYVVK 68
Query: 319 AQVLAGGRGKGTFKNGLKGGVRM 387
AQ+LAGGRGKGTF NG KGGV +
Sbjct: 69 AQILAGGRGKGTFDNGFKGGVHI 91
>UniRef50_Q8Y1Y3 Cluster: Succinyl-CoA synthetase beta chain; n=64;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Ralstonia solanacearum (Pseudomonas solanacearum)
Length = 388
Score = 67.7 bits (158), Expect = 4e-10
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
YV+++++R ++ASS+GG++IE+VAA P+ + +D G+ D + + KIG
Sbjct: 109 YVSLVVDRVSQKVALMASSEGGMDIEEVAAHTPEKIHTLIVDPQIGLQDAEADDIARKIG 168
Query: 708 LQEFAT-EAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFD 860
+ + + +A ++ +Y F + DA L E+NP G+ LDAKF FD
Sbjct: 169 VPDASVPQARQALQGLYKAFWETDASLAEINPLILTG-DGKVIALDAKFNFD 219
Score = 63.7 bits (148), Expect = 6e-09
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+N+HEY +LR + +PVP+ A + +EA+K A L V+KAQ+ AGGRGKG
Sbjct: 1 MNIHEYQGKEILRKYNVPVPRGIPAFSVEEALKAAETLGGPVWVVKAQIHAGGRGKG--- 57
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG--GSRTN 477
GGV++ + + A +L LVT QTG G + N
Sbjct: 58 ----GGVKVAKSMDEVKTYASNILGMTLVTHQTGPEGKKVN 94
>UniRef50_A3W610 Cluster: Succinyl-CoA synthetase beta subunit; n=2;
Roseovarius|Rep: Succinyl-CoA synthetase beta subunit -
Roseovarius sp. 217
Length = 391
Score = 67.3 bits (157), Expect = 5e-10
Identities = 38/90 (42%), Positives = 51/90 (56%)
Frame = +1
Query: 193 EYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNGLK 372
EY S LL +G+ VP+ A+T DEA + E++ + V+KAQ+ AGGR GL
Sbjct: 5 EYQSKELLAQYGVHVPEGRPARTPDEAQRLCKEIDARKYVVKAQIGAGGR-------GLA 57
Query: 373 GGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
GG+R TP D A ++L LVT QTG
Sbjct: 58 GGIRFAATPSAVADEARRLLGSTLVTDQTG 87
Score = 46.4 bits (105), Expect = 0.001
Identities = 31/111 (27%), Positives = 50/111 (45%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
+VAI ++ P+++AS GGV E A + D P+ S + + + +G
Sbjct: 109 FVAIALDPETGQPMLLASGAGGVEFEQRARMDEDTAQSCPLPPDSPESRTALATFLSGVG 168
Query: 708 LQEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFD 860
+ E A I F + D LIE+NP+A G++ +DAK D
Sbjct: 169 MTEAQEAAITAIFAARLAFTENDMTLIEINPFARTG-DGRWMAVDAKVAID 218
>UniRef50_Q8NMK7 Cluster: Succinyl-CoA synthetase beta chain; n=47;
Actinobacteria (class)|Rep: Succinyl-CoA synthetase beta
chain - Corynebacterium glutamicum (Brevibacterium
flavum)
Length = 398
Score = 67.3 bits (157), Expect = 5e-10
Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Frame = +3
Query: 501 RGSSHAGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQ 680
+G+ A YY +I+++R+ + + S +GG+ IE +A E P+A+ +D ++GI +D+
Sbjct: 92 QGADIAEEYYFSILLDRANRSYLAMCSVEGGMEIEILAKEKPEALAKVEVDPLTGIDEDK 151
Query: 681 ICRVIEKIGLQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRF 857
++ G + E A + ++ K++ ++ + +A L+EVNP G LD K
Sbjct: 152 AREIVTAAGFETEVAEKVIPVLIKIWQVYYEEEATLVEVNPLVLTD-DGDVIALDGKITL 210
Query: 858 DD 863
DD
Sbjct: 211 DD 212
Score = 48.4 bits (110), Expect = 2e-04
Identities = 34/84 (40%), Positives = 44/84 (52%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+++ EY + L HG+PV K VA T + A K A E+ +V KAQV GGRGK
Sbjct: 1 MDLFEYQARDLFETHGVPVLKGIVASTPEAARKAAEEIGGLTVV-KAQVKVGGRGKA--- 56
Query: 361 NGLKGGVRMVNTPEVAGDIAGKML 432
GGVR+ T A D A +L
Sbjct: 57 ----GGVRVAPTSAQAFDAADAIL 76
>UniRef50_Q2LW34 Cluster: Succinyl-CoA synthetase beta chain; n=1;
Syntrophus aciditrophicus SB|Rep: Succinyl-CoA
synthetase beta chain - Syntrophus aciditrophicus
(strain SB)
Length = 398
Score = 66.5 bits (155), Expect = 8e-10
Identities = 39/94 (41%), Positives = 49/94 (52%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+ ++EY R GIP P+ KT DE + A L +VLK+Q+ AGGRGK
Sbjct: 10 MKIYEYQVKEFFRSFGIPTPRGAAGKTSDEIVTAARSLGVMPVVLKSQIKAGGRGKA--- 66
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
GG+R NT E AG A +L LVT QTG
Sbjct: 67 ----GGIRTANTLEEAGLQAIDLLGSRLVTAQTG 96
Score = 65.3 bits (152), Expect = 2e-09
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Frame = +3
Query: 513 HAGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRV 692
H YV I+++R P ++ S +GGV+IE + E P + E ID G+ Q RV
Sbjct: 113 HERELYVGILVDRETGRPALLVSGEGGVDIEKLGREAPGQILCESIDPAYGLRSFQASRV 172
Query: 693 IEKIGL-QEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+GL A + +Y LF++ D +E+NP A +G+ LD K DD
Sbjct: 173 FLSLGLPSASAARCAELSLSLYRLFMEMDCSDVEINPLAL-TTSGEPVALDGKVNVDD 229
>UniRef50_P80886 Cluster: Succinyl-CoA synthetase beta chain; n=76;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Bacillus subtilis
Length = 385
Score = 66.5 bits (155), Expect = 8e-10
Identities = 37/94 (39%), Positives = 57/94 (60%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+N+HEY +LR +G+ VP+ VA T +EA++ A L++ V+KAQ+ AGGRGK
Sbjct: 1 MNIHEYQGKEVLRKYGVSVPEGKVAFTAEEAVESAKSLSSSVYVVKAQIHAGGRGKA--- 57
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
GGV++ + + A ++L + LVT QTG
Sbjct: 58 ----GGVKIAKSLDEVKAYAEELLGKTLVTHQTG 87
Score = 60.5 bits (140), Expect = 6e-08
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
YY+ ++++R+ + V++AS +GG IE+VA + P+ + ID G+ Q + I
Sbjct: 108 YYIGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIKKAVIDPAVGLQGYQAREIAFAI 167
Query: 705 GL-QEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFD 860
+ +E +A + +Y F++ D + E+NP G LDAK FD
Sbjct: 168 NIPKELVGKAAKFMLGLYKAFVEKDCSIAEINPLVVTG-DGNVMALDAKLNFD 219
>UniRef50_A1APQ8 Cluster: Succinyl-CoA synthetase, beta subunit;
n=2; Desulfuromonadales|Rep: Succinyl-CoA synthetase,
beta subunit - Pelobacter propionicus (strain DSM 2379)
Length = 394
Score = 65.3 bits (152), Expect = 2e-09
Identities = 39/94 (41%), Positives = 53/94 (56%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+ +HEY + +L GI +P+ VA + + A EL V+KAQV AGGRGKG
Sbjct: 1 MKIHEYQAKDILAGFGIAIPRGRVAMNASQVERAARELGGH-CVIKAQVYAGGRGKG--- 56
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
GG+R+ P AG+IA ++L LVT QTG
Sbjct: 57 ----GGIRVAQDPGQAGEIAKELLGTKLVTPQTG 86
Score = 58.4 bits (135), Expect = 2e-07
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y++I ++R + +IAS++GG++IE++A PD + ID G+ Q R +G
Sbjct: 108 YLSITLDRESSRYCLIASAEGGMDIEEIARTAPDRIRILTIDPFIGLRSYQARRTALGLG 167
Query: 708 L-QEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDDMLXQ 875
L E +I +Y L+ D L+E+NP G +D K FDD Q
Sbjct: 168 LVGPLCEECVELILNLYRCLLERDCSLVEINPLVV-TNAGWLVAMDTKMTFDDNALQ 223
>UniRef50_Q18UM6 Cluster: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp; n=2; Desulfitobacterium
hafniense|Rep: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp - Desulfitobacterium hafniense
(strain DCB-2)
Length = 372
Score = 64.9 bits (151), Expect = 3e-09
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
YV+I ++ + +++A +GGV+IE +A P+ + E +D+ G+ Q ++ +G
Sbjct: 96 YVSITVDAASGLAMVMACLEGGVDIEQIARTTPEKIIKEKVDMSLGLMAYQADNIMYGLG 155
Query: 708 L-QEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
L Q A E ++ K+Y LF+K +A L+E+NP G D KF DD
Sbjct: 156 LEQSAAKEGSKILLKLYQLFVKYNAELVEINPLMI-LRDGTMAAADGKFNLDD 207
Score = 37.5 bits (83), Expect = 0.45
Identities = 30/85 (35%), Positives = 41/85 (48%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+ + EY + L + GIP+P+ N + A E VLKAQVL GGRGK
Sbjct: 1 MKLFEYQAKELFAESGIPIPQ-NALIGDISELNSALEKIGLPCVLKAQVLQGGRGKA--- 56
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLK 435
G V+ V T E A A ++L+
Sbjct: 57 ----GLVKFVRTKEEAQKEAERILE 77
>UniRef50_Q4W952 Cluster: Succinyl-CoA synthetase beta subunit,
putative; n=5; Trichocomaceae|Rep: Succinyl-CoA
synthetase beta subunit, putative - Aspergillus
fumigatus (Sartorya fumigata)
Length = 407
Score = 64.9 bits (151), Expect = 3e-09
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
+Y+A+ +R PVI+ S QGGVNIE N D + ++ GIT + + + ++
Sbjct: 131 FYLALTFDRERYSPVILISDQGGVNIE----SNQDKLHRFWFNLSRGITGETMAGIQKQS 186
Query: 705 GL--QEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+E T +I++M LF + DA+L+E+NP G F CLDAKF FD+
Sbjct: 187 CFTDKEMPT-IESIIRQMIKLFEERDAILLELNPLVRTP-EGSFVCLDAKFEFDN 239
Score = 57.6 bits (133), Expect = 4e-07
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +1
Query: 235 VPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNGLKGGVRMVNTPEVAGD 414
VP+ V +A + + VLK+Q+LAGGRGKG + KGG+R+V TPE A
Sbjct: 36 VPRGYVVTNPGDAEAVVSSIGAPS-VLKSQILAGGRGKGKMSSDGKGGIRIVATPEQAFQ 94
Query: 415 IAGKMLKQLLVTKQT 459
A +ML L T+QT
Sbjct: 95 NASRMLGHYLATQQT 109
>UniRef50_O28732 Cluster: Succinyl-CoA synthetase beta chain 1; n=3;
Archaeoglobus fulgidus|Rep: Succinyl-CoA synthetase beta
chain 1 - Archaeoglobus fulgidus
Length = 382
Score = 64.1 bits (149), Expect = 5e-09
Identities = 35/114 (30%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
YYV ++++S P +I S GG+++E++AA++PDA+ D + G+ D ++ + + +
Sbjct: 100 YYVGYVVDKSSRLPTVIFSRMGGMDVEEIAAKHPDAIHRIYFDPLWGLKDYEVRKALFRA 159
Query: 705 GLQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
G + E + +IKK+ D+ +A L E+NP A F DA+ DD
Sbjct: 160 GFEGEEFKQMFDIIKKLVDIAFAYEAELTEINPLA--VTDEGFLAADARLNTDD 211
Score = 61.7 bits (143), Expect = 2e-08
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+ +HE+ + + HGI VP+ VA + +EA K A +L + +V+KAQ+L GGRGK
Sbjct: 1 MRLHEHQAKQIFAKHGIRVPRGEVATSPEEAEKIAEKLGGR-VVVKAQILVGGRGKA--- 56
Query: 361 NGLKGGVRMVNTPEVAGDIAGKML 432
GGV+ N+PE A ++A K+L
Sbjct: 57 ----GGVKKANSPEEAKEVAKKIL 76
>UniRef50_Q8UC60 Cluster: Succinyl-CoA synthetase beta chain; n=29;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Agrobacterium tumefaciens (strain C58 / ATCC 33970)
Length = 397
Score = 63.7 bits (148), Expect = 6e-09
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+N+HEY + LL+ +G PV + +EA A +L V+K+Q+ AGGRGKG FK
Sbjct: 1 MNIHEYQAKALLKGYGAPVAEGVAILKVEEAEAAAKQLPGPLYVVKSQIHAGGRGKGKFK 60
Query: 361 N---GLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
KGGVR+ + E + ML LVT QTG
Sbjct: 61 ELGPDAKGGVRLAKSIEEVVSHSRDMLGNTLVTAQTG 97
>UniRef50_Q9HPP1 Cluster: Succinyl-CoA synthetase beta chain; n=6;
Halobacteriaceae|Rep: Succinyl-CoA synthetase beta chain
- Halobacterium salinarium (Halobacterium halobium)
Length = 382
Score = 63.3 bits (147), Expect = 8e-09
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
YV + M+RS PV++ S +GGV+IE VA E P+ + E +D G+ Q + G
Sbjct: 101 YVGVTMDRSEGAPVVMVSERGGVDIESVAEEAPEDIVREHVDPSFGLQAYQARNAVYDAG 160
Query: 708 L-QEFATEAHGMIKKMYDLFLKXDALLIEVNP 800
+ Q+ A + +++ +YDL+ DA +E+NP
Sbjct: 161 IEQDVAGDVAKIVQGVYDLWADSDATEVEINP 192
Score = 50.4 bits (115), Expect = 6e-05
Identities = 32/91 (35%), Positives = 46/91 (50%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+ +HEY + + D GIP P+ +A + DEA++ A L+ + +KAQV GGRGK
Sbjct: 1 MKLHEYQAKEVFADAGIPTPESALATSVDEAVEVADALD-YPVAVKAQVHVGGRGKA--- 56
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTK 453
G+K E A I G LK V +
Sbjct: 57 GGIKLAENTAEAREAAESILGMDLKGYTVDR 87
>UniRef50_Q57663 Cluster: Succinyl-CoA synthetase beta chain; n=6;
Euryarchaeota|Rep: Succinyl-CoA synthetase beta chain -
Methanococcus jannaschii
Length = 364
Score = 62.9 bits (146), Expect = 1e-08
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVI--- 695
YYV+I+++R P+II S++GGV+IE+VA +NP+ + ID+ I R I
Sbjct: 98 YYVSIIIDRDAKKPLIIFSTEGGVDIEEVAEKNPEKIIKYHIDVRKPFL-PYIARWIVKE 156
Query: 696 EKIGLQEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
K+ E A +I K+Y +F + DA ++E+NP G + DA DD
Sbjct: 157 AKLPSNEIGKVA-DVIYKLYKIFKELDATMVEINPLVI-TKDGNVYAADAVLHLDD 210
Score = 46.8 bits (106), Expect = 7e-04
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGK 348
+ +HEY + + + +GIPVP+ + +D+ + K++VLKAQVL GGRGK
Sbjct: 1 MKLHEYEAKNIFKKYGIPVPESFLVSKEDDLNSINVD---KEVVLKAQVLVGGRGK 53
>UniRef50_Q1AWI8 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Rubrobacter xylanophilus DSM 9941|Rep: Succinyl-CoA
synthetase, beta subunit - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 383
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y++ M++R P+I+ S++GGV+IE+VA +P ++ +D + G+ Q+ + G
Sbjct: 101 YLSAMVDRESRRPLILFSTEGGVDIEEVAERSPGSIVRLHVDPLVGLLPYQVRELTFASG 160
Query: 708 LQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
L E A + ++ +Y+ F DA L+E+NP G+ LDAK D+
Sbjct: 161 LSGETAKDFGRAVQNLYEAFRGIDASLVEINPLVVTG-EGEVVALDAKVTVDN 212
Score = 40.3 bits (90), Expect = 0.063
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
++++E+ LL G+ VA T +EA + A L + +KAQVL GGRGK
Sbjct: 1 MDLYEHQGKELLGRFGLRTLPGVVATTPEEARRAAERLGGT-VAVKAQVLTGGRGKA--- 56
Query: 361 NGLKGGVRMVNTPEVAGDIAGKML 432
GG+++ +PE A + A ++L
Sbjct: 57 ----GGIKVAESPEEAEEAARRIL 76
>UniRef50_Q6MBM7 Cluster: Probable succinate-CoA ligase
(ADP-forming) beta chain; n=1; Candidatus Protochlamydia
amoebophila UWE25|Rep: Probable succinate-CoA ligase
(ADP-forming) beta chain - Protochlamydia amoebophila
(strain UWE25)
Length = 389
Score = 62.1 bits (144), Expect = 2e-08
Identities = 30/96 (31%), Positives = 54/96 (56%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+N HE+ + +LR +GIPVP F +A + E + + + ++K QV AGGRGK
Sbjct: 1 MNTHEFQAKQILRKYGIPVPDFYIASSSKEVEEIIKQYQLQSAIIKVQVHAGGRGKA--- 57
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGGS 468
GGV++ P+ + + +++ + ++ +QTG S
Sbjct: 58 ----GGVKLATNPQEILEFSQELIGKKIINEQTGPS 89
Score = 61.7 bits (143), Expect = 2e-08
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
+Y+ I + R V+IAS GGVNIE +A E P+ + PI + + R+ +
Sbjct: 108 FYLGITINRELASRVLIASPIGGVNIEKIAHEQPNQLLMLPIPLEETFRSYHLIRIASFM 167
Query: 705 GLQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
G + + E +I+ + F + DA L+E+NP + G LDAK DD
Sbjct: 168 GWKGKQIQEGVAIIQSLVKAFKETDASLLEINPLV-ETKEGHLLALDAKLSIDD 220
>UniRef50_Q67LC8 Cluster: Succinyl-CoA synthetase beta subunit; n=1;
Symbiobacterium thermophilum|Rep: Succinyl-CoA
synthetase beta subunit - Symbiobacterium thermophilum
Length = 373
Score = 62.1 bits (144), Expect = 2e-08
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
YYV+I ++ P+++AS GGV IE V D + +E IDI +G+ Q + KI
Sbjct: 99 YYVSITLDGMAKKPLVMASEYGGVEIESVP---HDKIVFEHIDIETGLLPFQAREIARKI 155
Query: 705 GLQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
L + A + ++ +Y F K DA L+E+NP A + D +F +D
Sbjct: 156 NLTGDLADQFVRILTGLYQAFRKYDAELVEINPLALTDGGTRLIAADGRFNVED 209
Score = 50.8 bits (116), Expect = 4e-05
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+ ++EY++ + +HG+P + T +EA + A ++ +KAQVL GGRGK
Sbjct: 1 MKLYEYLAKQMFAEHGVPTGNGILCTTPEEAEEAARKIG--PCAIKAQVLVGGRGKA--- 55
Query: 361 NGLKGGVRMVNTPEVAGDIAGKML 432
GG+++ NTPE A + A ++L
Sbjct: 56 ----GGIKLANTPEEARERAREIL 75
>UniRef50_Q64U25 Cluster: Succinyl-CoA synthetase beta chain; n=5;
Bacteroides|Rep: Succinyl-CoA synthetase beta chain -
Bacteroides fragilis
Length = 382
Score = 62.1 bits (144), Expect = 2e-08
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = +3
Query: 516 AGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVI 695
A YY++ ++R+ +I S+ GG++IE+VA ++P+ + ID + G+ D +
Sbjct: 98 AAEYYISFTIDRNTRSVTLIMSAAGGMDIEEVARQSPEKIIRCSIDPLIGVPDYLAHKFA 157
Query: 696 EKIGLQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+ Q E A +I+ +Y F++ DA L E+NP + G +DAK FDD
Sbjct: 158 FSLFEQAEQANRMATIIQDLYKAFIEKDASLAEINPLVLTPV-GTLLAIDAKMVFDD 213
Score = 47.6 bits (108), Expect = 4e-04
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+ VHEY + + +GIPV + + T D A+ + + +KAQVL GGRGK
Sbjct: 1 MKVHEYQAKEIFSTYGIPVERHALCHTADGAVAAYHRMGVNRVAIKAQVLTGGRGKA--- 57
Query: 361 NGLKGGVRMVN 393
GGV++ N
Sbjct: 58 ----GGVKLAN 64
>UniRef50_Q98EC5 Cluster: Succinyl-CoA synthetase beta chain; n=80;
Bacteria|Rep: Succinyl-CoA synthetase beta chain -
Rhizobium loti (Mesorhizobium loti)
Length = 397
Score = 62.1 bits (144), Expect = 2e-08
Identities = 40/97 (41%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+N+HEY LL+ G PV + EA A L V+K+Q+ AGGRGKG FK
Sbjct: 1 MNIHEYQGKALLKSFGAPVAEGVPVFKASEAEAAARALPGPLYVVKSQIHAGGRGKGKFK 60
Query: 361 N---GLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
KGGVR+ + A +ML LVTKQTG
Sbjct: 61 ELSPDAKGGVRLAKSVADVVANANEMLGHTLVTKQTG 97
Score = 59.7 bits (138), Expect = 1e-07
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y++I+++RS + S++GG++IE VA + P+ + ID G+T D + ++ +
Sbjct: 119 YLSILVDRSVGRIAFVVSTEGGMDIEAVAHDTPEKVITVAIDPERGVTADDVKKLNAALK 178
Query: 708 LQEFATEAHG-MIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
L A + G + +Y F++ D L+EVNP G+ LDAK FD+
Sbjct: 179 LDGDAAKDGGTLFPILYKAFIEKDMSLLEVNPLIV-MKNGRLRVLDAKVSFDN 230
>UniRef50_Q8G6B4 Cluster: Succinyl-CoA synthetase beta chain; n=3;
Bifidobacterium|Rep: Succinyl-CoA synthetase beta chain
- Bifidobacterium longum
Length = 400
Score = 60.9 bits (141), Expect = 4e-08
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
YYV+I ++R+ ++A++ GG +E++A E+P+A+ ID + + + I
Sbjct: 100 YYVSISVDRTSRDFDVLATANGGTEVEEIAKEHPEAVKRLHIDALGDFDLAAATEMAQSI 159
Query: 705 GLQEF-ATEAHGMIKKMYDLFLKXDALLIEVNPYA-----XDALTGQFFCLDAKFRFDD 863
G +A ++ KM+ F DA L+E+NP A D T Q LDAK DD
Sbjct: 160 GFYHADVDQAAQILLKMWRCFKDNDATLVEINPLAKIGDPDDESTKQLSALDAKISLDD 218
>UniRef50_Q1R3M2 Cluster: SucC, succinyl-CoA synthetase beta chain;
n=5; Escherichia coli|Rep: SucC, succinyl-CoA synthetase
beta chain - Escherichia coli (strain UTI89 / UPEC)
Length = 389
Score = 60.5 bits (140), Expect = 6e-08
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y ++++R I S +GGV IE VA E P+ ++ ID ++G+ I + +
Sbjct: 112 YFGMVVDRESQRVTFIVSPEGGVEIEKVAHETPEKISSVSIDPLTGVQPCHIREMFAVLQ 171
Query: 708 LQE--FATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
L+ FAT + ++ + + F + D L+E+NP TG+F C DAK DD
Sbjct: 172 LEHGLFATFSR-LVNQAWKAFNELDFALLEINPLVLRE-TGEFMCADAKVSLDD 223
Score = 47.6 bits (108), Expect = 4e-04
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATE---LNTKDIVLKAQVLAGGRGKG 351
+N+HEY + +LL G+P PK +A + + A + +K VLKAQV AGGRGK
Sbjct: 1 MNLHEYQAKSLLAGMGMPCPK-EIAIQQISQLADAWQHIACPSKGAVLKAQVHAGGRGKA 59
Query: 352 TFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
GGV+++ A +ML LVT QTG
Sbjct: 60 -------GGVKVLKQLPEAQAFVQQMLGSQLVTYQTG 89
>UniRef50_Q3A7Y4 Cluster: Succinyl-CoA synthetase, beta subunit;
n=4; Desulfuromonadales|Rep: Succinyl-CoA synthetase,
beta subunit - Pelobacter carbinolicus (strain DSM 2380
/ Gra Bd 1)
Length = 388
Score = 60.1 bits (139), Expect = 7e-08
Identities = 36/94 (38%), Positives = 56/94 (59%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+ +HEY + L +GIP+P+ +A++ +E + A + +V KAQ+ AGGRGK
Sbjct: 1 MKLHEYQAKQLFHRYGIPIPEGRLARSVEETGQAARAFAGRCVV-KAQIHAGGRGKA--- 56
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
GGV VN+ + A +IA ++L+ LVT QTG
Sbjct: 57 ----GGVARVNSVDQARNIAQRLLQHTLVTAQTG 86
Score = 56.0 bits (129), Expect = 1e-06
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y+++ ++R+ +IAS GGV+IE A + P+ + ID + G+ + +G
Sbjct: 108 YLSLTLDRANGRYCLIASPDGGVDIEQTARKTPERVRRLTIDPLVGLRAFHARDIARFLG 167
Query: 708 LQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
L + A +I +Y L+ DA L+E+NP A G+ +DAK DD
Sbjct: 168 LDGPLSAAASKVILSLYRCLLEKDASLVEINPLAVTE-EGRLMAMDAKVSIDD 219
>UniRef50_Q8D2D7 Cluster: SucC protein; n=4;
Gammaproteobacteria|Rep: SucC protein - Wigglesworthia
glossinidia brevipalpis
Length = 396
Score = 58.8 bits (136), Expect = 2e-07
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+N+HEY + L + IP+PK K DE K + L+T V+K Q+ AGGRGK
Sbjct: 1 MNLHEYQAKKLFNKYEIPIPKGYCIKELDEIEKTISNLSTGPWVIKCQIHAGGRGK---- 56
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQT--GGSRTN 477
GG+++ N+ + + A K L L+T QT G + N
Sbjct: 57 ---SGGIKITNSKKEIHEFAKKWLGNKLITYQTDKNGQKVN 94
Score = 50.8 bits (116), Expect = 4e-05
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y++ ++ R + ++I+S GGV+IE++ + + + E ++ I D Q ++ K+G
Sbjct: 109 YLSFVINRKKSSIMLISSDSGGVDIENIFKKKSNNIYKEILESCYLIQDFQSRKIAFKLG 168
Query: 708 LQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
LQ + + K+ LFL+ D +E+NP D CLD K DD
Sbjct: 169 LQGNQINQFVKICNKLSLLFLENDLTTLEINPIVIDD-KNNLICLDGKIIIDD 220
>UniRef50_A3GUP8 Cluster: Succinyl-CoA synthetase beta chain; n=1;
Vibrio cholerae NCTC 8457|Rep: Succinyl-CoA synthetase
beta chain - Vibrio cholerae NCTC 8457
Length = 148
Score = 58.8 bits (136), Expect = 2e-07
Identities = 37/93 (39%), Positives = 50/93 (53%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+N+HEY + L + G+PVP+ T EA + A ++T V+K QV AGGRGK
Sbjct: 1 MNLHEYQAKQLFAEFGLPVPEGYACDTPQEAFEAAGRISTAKKVVKCQVHAGGRGKA--- 57
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQT 459
GGV + +T E A K L + LVT QT
Sbjct: 58 ----GGVELHDTKEGVKAFAQKWLGKNLVTYQT 86
>UniRef50_P45101 Cluster: Succinyl-CoA synthetase beta chain; n=16;
Gammaproteobacteria|Rep: Succinyl-CoA synthetase beta
chain - Haemophilus influenzae
Length = 389
Score = 58.8 bits (136), Expect = 2e-07
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
+Y++ +++R+ V IASS+GG+NIE+V +P + ID + G Q + K+
Sbjct: 108 FYLSAVVDRTSQKVVFIASSEGGMNIEEVVQNSPHLLHKVTIDPLFGGLPYQGRELAFKL 167
Query: 705 GLQEFATEAH-GMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
GL + + + LFL+ D L+EVNP G CLDAK DD
Sbjct: 168 GLSGTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTP-QGNLVCLDAKISVDD 220
Score = 50.8 bits (116), Expect = 4e-05
Identities = 34/93 (36%), Positives = 47/93 (50%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+N+HEY + L +G+PV V ++ ++ +L+ K QV AGGRGK
Sbjct: 1 MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGGKWAAKCQVHAGGRGKA--- 57
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQT 459
GGV++V E A A K L Q LVT QT
Sbjct: 58 ----GGVKLVQDVEEARAFAEKWLGQRLVTFQT 86
>UniRef50_Q8ZVF3 Cluster: Succinyl-CoA synthetase beta chain; n=8;
Thermoprotei|Rep: Succinyl-CoA synthetase beta chain -
Pyrobaculum aerophilum
Length = 382
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+ +HEY + L +G+ +P VA T +E +K A E+ +VLKAQV+ GRGK
Sbjct: 1 MKLHEYEAKELFSKYGVKIPPGKVALTPEEVLKIAREIGAP-VVLKAQVVVAGRGKA--- 56
Query: 361 NGLKGGVRMVNTPEVAGDIAGKM----LKQLLVTK 453
GG+++ N+PE A +++ +M +K L+V K
Sbjct: 57 ----GGIKVANSPEEAYELSKRMFGMNIKGLIVKK 87
Score = 56.8 bits (131), Expect = 7e-07
Identities = 30/115 (26%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y++++++R+ + +AS GG++IE++A +P+ + +D +G+ D + ++ +G
Sbjct: 101 YLSLIIDRASRRYLFLASPVGGMDIEEIAKTSPEKIKRVYVDPATGLRDYHVRSIVSWLG 160
Query: 708 LQEFATE---AHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
++ ++ A +++ MY + + DA L+E NP A G+ LDA+ DD
Sbjct: 161 FKQGTSQWQQAASIVQAMYRIMVDYDAELVESNPLAV-TKEGEVIPLDARVIVDD 214
>UniRef50_Q2LPK9 Cluster: Succinyl-CoA synthetase beta chain; n=1;
Syntrophus aciditrophicus SB|Rep: Succinyl-CoA
synthetase beta chain - Syntrophus aciditrophicus
(strain SB)
Length = 380
Score = 58.0 bits (134), Expect = 3e-07
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+ +HEY + + +GIPVP+ VA T EA++ A E+ ++LKAQVL GGR
Sbjct: 1 MRLHEYEALDIFERNGIPVPRRGVASTMHEALRVAGEIG-YPVILKAQVLVGGR------ 53
Query: 361 NGLKGGVRMVNTPEVAGDIAGKML 432
GL GG++ ++P+ ++A +L
Sbjct: 54 -GLAGGIKTASSPDELKEVAEALL 76
Score = 46.8 bits (106), Expect = 7e-04
Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI- 704
YV I ++ PVI+AS++GG+ IE+ A +P+ + +D Q ++ ++
Sbjct: 101 YVGITIDGYSGKPVIVASTEGGMLIEETARTSPEKIAAIHVDSSLEFYPYQARTMLGRLS 160
Query: 705 GL-QEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
G+ Q+ T +I ++Y++ ++ + L+ E+NP G +DA DD
Sbjct: 161 GINQQLLTSWTDVIGQLYNVVMRYEPLICEINPLVV-LPNGGLIAVDAVLEVDD 213
>UniRef50_Q07LP6 Cluster: Succinate--CoA ligase; n=1;
Rhodopseudomonas palustris BisA53|Rep: Succinate--CoA
ligase - Rhodopseudomonas palustris (strain BisA53)
Length = 375
Score = 58.0 bits (134), Expect = 3e-07
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Frame = +3
Query: 516 AGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVI 695
A +Y A++ + + PV++ S +GGV IE A+ +P ++ +D++ G + +
Sbjct: 97 ADEFYAAVLCDTARRLPVVLFSPEGGVEIETTASRSPASLRRYEVDVLRGFGRSEAELFV 156
Query: 696 EKIGLQEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTG-QFFCLDAKFRFDD 863
+ L+ T ++ ++Y F+ DA L+E+NP A LT + LDAK D+
Sbjct: 157 TGLDLRGADTAVVDVLVRLYRAFVDSDAELVEINPLA--VLTDRRVVALDAKVTLDE 211
>UniRef50_Q18XG4 Cluster: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp; n=2; Desulfitobacterium
hafniense|Rep: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp - Desulfitobacterium hafniense
(strain DCB-2)
Length = 390
Score = 57.2 bits (132), Expect = 5e-07
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y +I M+ + PV++ S+QGG+ IE +AA NP+ + E ID + ++ + + G
Sbjct: 101 YASITMDFTEGKPVMMVSAQGGMEIESLAAANPELLIKEHIDPWREVFGHRLRDLWRRAG 160
Query: 708 LQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+ E ++ ++ +FL+ DAL E+NP G+ DAK DD
Sbjct: 161 FRGGQVVELENILGRLVRVFLETDALTAEINPLVM-TQEGKIIAADAKLILDD 212
Score = 39.5 bits (88), Expect = 0.11
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = +1
Query: 187 VHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGK-GTFKN 363
++EY + + +GIP+ + +A EA + K +V+KAQV+AGGRGK G
Sbjct: 3 LYEYEAKEVFSKYGIPLGQNGIATNPAEAGMICAGIG-KPVVVKAQVMAGGRGKAGLILP 61
Query: 364 GLKGGVRMVNTPEVAG-DIAGKMLKQLLVTKQ 456
++ G + G+ +K+LL+ +Q
Sbjct: 62 AADPEAAAKAAAQILGKEHHGEQVKKLLIEEQ 93
>UniRef50_UPI00015B9071 Cluster: UPI00015B9071 related cluster; n=1;
unknown|Rep: UPI00015B9071 UniRef100 entry - unknown
Length = 384
Score = 56.8 bits (131), Expect = 7e-07
Identities = 32/116 (27%), Positives = 59/116 (50%)
Frame = +3
Query: 516 AGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVI 695
A +Y A++++ + P+++ S++GG++IE+VAA PDA+ +D +G ++
Sbjct: 97 ASEFYAAVLIDTASRCPLVLFSTEGGMDIEEVAATRPDALRRHAVDPEAGFDAAAARALL 156
Query: 696 EKIGLQEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+ L ++ + + + DA LIE+NP A G+ LD K DD
Sbjct: 157 AGLDLGGAEGAVADILASLTETSGRVDAELIEINPLAV-LDDGRVVALDCKLTLDD 211
Score = 37.1 bits (82), Expect = 0.59
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 181 LNVHEYISYT-LLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTF 357
+N E+++ +L GIPVP+ + +T +EA EL ++KAQV G RGK
Sbjct: 1 MNFLEHVAKARVLAPAGIPVPRAVLCRTPEEAAAAFGELG--PCMVKAQVPTGKRGKA-- 56
Query: 358 KNGLKGGVRMVNTPEVAGDIAGKML 432
GG++ N E A +A ++L
Sbjct: 57 -----GGIKPANAAEEARGVAERIL 76
>UniRef50_A5CXM5 Cluster: Succinyl-CoA synthetase beta subunit; n=1;
Candidatus Vesicomyosocius okutanii HA|Rep: Succinyl-CoA
synthetase beta subunit - Vesicomyosocius okutanii
subsp. Calyptogena okutanii (strain HA)
Length = 386
Score = 56.8 bits (131), Expect = 7e-07
Identities = 30/121 (24%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Frame = +3
Query: 504 GSSHAGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQI 683
G + +Y+ ++++R ++AS++GG++IE VA + P+ + I+ + ++
Sbjct: 101 GENITHEFYLGLLIDRQTKKITVLASTKGGMDIEKVARKTPNQIIKFGINPLGHLSVQDC 160
Query: 684 CRVIEKIGLQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFD 860
+ +K+ L +F + + ++ +Y++F + D LIE+NP + LD K FD
Sbjct: 161 AFMAKKLDLHFKFTKQFNNILLGLYEIFTQKDVNLIEINPLVI-TKENKLLALDGKIDFD 219
Query: 861 D 863
D
Sbjct: 220 D 220
Score = 46.8 bits (106), Expect = 7e-04
Identities = 30/93 (32%), Positives = 46/93 (49%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+++HEY + TL I PK + + D+A L V+KAQ+ AGGRGKG
Sbjct: 1 MHIHEYQAKTLFNHKHIQTPKGILIYSVDQASDACKTLGGSIWVVKAQIHAGGRGKG--- 57
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQT 459
GG+ + + E + ++L L+T QT
Sbjct: 58 ----GGIILCRSIEEVKNACSQLLNSQLITPQT 86
>UniRef50_Q8TXE3 Cluster: Succinyl-CoA synthetase beta subunit; n=2;
Archaea|Rep: Succinyl-CoA synthetase beta subunit -
Methanopyrus kandleri
Length = 359
Score = 55.6 bits (128), Expect = 2e-06
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Frame = +3
Query: 516 AGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVI 695
A +YV+I ++R+ PV++ S +GGV+IE+V E A Y +D + G+ + I
Sbjct: 98 AEEWYVSITLDRAKRRPVLLVSREGGVDIEEVPDEK-IARRY--LDPILGLRPFEAREAI 154
Query: 696 EKIGL-QEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+ G+ +E + +I MY++F DA L+E+NP G+ DA D+
Sbjct: 155 LEAGIPKEHLRDVEEVITSMYEVFESYDAHLVEINPLVLTE-NGEVVAADAVVNLDE 210
Score = 49.6 bits (113), Expect = 1e-04
Identities = 30/80 (37%), Positives = 45/80 (56%)
Frame = +1
Query: 193 EYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNGLK 372
EY + LL++ G+P+P+ +VA+T +A + A EL + +KAQV G RGK
Sbjct: 6 EYQAKHLLKEAGVPIPEGDVARTSADAARIAAELGGP-VAVKAQVPVGARGKA------- 57
Query: 373 GGVRMVNTPEVAGDIAGKML 432
GG+ + PE A A K+L
Sbjct: 58 GGILFADDPEGARKAARKLL 77
>UniRef50_Q0PQT6 Cluster: Succinyl CoA ligase beta subunit; n=1;
Endoriftia persephone 'Hot96_1+Hot96_2'|Rep: Succinyl
CoA ligase beta subunit - Endoriftia persephone
'Hot96_1+Hot96_2'
Length = 172
Score = 55.2 bits (127), Expect = 2e-06
Identities = 34/94 (36%), Positives = 48/94 (51%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+N+HEY + L D+GIPVP+ + +A A EL + ++K Q GGRGK
Sbjct: 1 MNLHEYQAKKLFADYGIPVPEGKTVSSPSDARAAAQELGGEVWLVKTQAHTGGRGKA--- 57
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTG 462
GGV + + + A +L LVTKQTG
Sbjct: 58 ----GGVTLAKSLDEVEAAAEAILGMTLVTKQTG 87
>UniRef50_P0A839 Cluster: Succinyl-CoA synthetase beta chain; n=99;
Proteobacteria|Rep: Succinyl-CoA synthetase beta chain -
Shigella flexneri
Length = 388
Score = 55.2 bits (127), Expect = 2e-06
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y+ +++RS V +AS++GGV IE VA E P + +D ++G Q + K+G
Sbjct: 109 YLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLG 168
Query: 708 LQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFD 860
L+ + + + + +FL+ D LIE+NP G CLD K D
Sbjct: 169 LEGKLVQQFTKIFMGLATIFLERDLALIEINPLVI-TKQGDLICLDGKLGAD 219
Score = 54.0 bits (124), Expect = 5e-06
Identities = 35/93 (37%), Positives = 49/93 (52%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+N+HEY + L +G+P P T EA + A+++ V+K QV AGGRGK
Sbjct: 1 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKA--- 57
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQT 459
GGV++VN+ E A L + LVT QT
Sbjct: 58 ----GGVKVVNSKEDIRAFAENWLGKRLVTYQT 86
>UniRef50_Q6ARL2 Cluster: Probable succinyl-CoA synthetase, beta
chain; n=1; Desulfotalea psychrophila|Rep: Probable
succinyl-CoA synthetase, beta chain - Desulfotalea
psychrophila
Length = 386
Score = 54.8 bits (126), Expect = 3e-06
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
Frame = +3
Query: 504 GSSHAGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQI 683
G S A Y++I+++R IIA GG+NIE+VAA P+ + I+ + G I
Sbjct: 100 GVSIARELYLSILVDRERACITIIACQDGGMNIEEVAASTPERIGKIHINPLIGPRSYHI 159
Query: 684 CRVIEKIGL-QEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFD 860
+ E + + QE A I +Y LFL D ++E+NP Q LDAK D
Sbjct: 160 NQAREWLNIAQEQARAFSLFIHALYKLFLDYDCSMVEINPLIITE-DNQLIALDAKVDTD 218
Score = 53.6 bits (123), Expect = 6e-06
Identities = 36/96 (37%), Positives = 50/96 (52%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+ +HEY + L R + IPVP+ + T + +K A + I +KAQ+ AGGRGKG
Sbjct: 1 MKIHEYQAKQLFRKYSIPVPE-GLLCTNLQEVKTALKSLQLPIAVKAQIHAGGRGKG--- 56
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGGS 468
GGV++ T A +L LVT QTG S
Sbjct: 57 ----GGVKLGKTATEVVQYADDILGMSLVTAQTGPS 88
>UniRef50_A2SQQ5 Cluster: Succinyl-CoA synthetase, beta subunit;
n=4; Methanomicrobiales|Rep: Succinyl-CoA synthetase,
beta subunit - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 361
Score = 53.6 bits (123), Expect = 6e-06
Identities = 30/92 (32%), Positives = 52/92 (56%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
YY++I ++R+ P+I+ SS+GGV IE +A E P+A+ +D D I R +
Sbjct: 99 YYLSITIDRAKKMPLILFSSEGGVEIETLAKERPEALRRVYVDPSFVTLPDFIVRNVIGT 158
Query: 705 GLQEFATEAHGMIKKMYDLFLKXDALLIEVNP 800
+E T +++ ++ +F DA+L E+NP
Sbjct: 159 NPKEIGT----IVRDLFAVFRSRDAVLAEINP 186
Score = 45.2 bits (102), Expect = 0.002
Identities = 33/91 (36%), Positives = 46/91 (50%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
+ EY + + R+ GIPVP + + DEA A + + +VLKAQV GGRGK
Sbjct: 1 MKFREYEAKQIFREAGIPVPNSVLITSADEA-NAAQKKVAEKVVLKAQVDVGGRGKA--- 56
Query: 361 NGLKGGVRMVNTPEVAGDIAGKMLKQLLVTK 453
G+ N +VA D+ K +K L V K
Sbjct: 57 GGIL-PANAENISDVARDLFAKTIKGLPVEK 86
>UniRef50_Q97C30 Cluster: Succinyl-CoA synthetase beta subunit; n=6;
Thermoplasmatales|Rep: Succinyl-CoA synthetase beta
subunit - Thermoplasma volcanium
Length = 384
Score = 52.8 bits (121), Expect = 1e-05
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEP-IDIVSGITDDQICRVIEK 701
YYV+I + R+ P++IAS+ GG+ IE+V PD ++ ID G +D +
Sbjct: 115 YYVSIALNRAAKSPMLIASAMGGMEIENV----PDDKIFKRIIDPSLGYSDFIGREASQF 170
Query: 702 IGL-QEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFD 860
+GL E + + ++KK+Y+++ D L+E+NP + G+ DAK D
Sbjct: 171 MGLPPELSKQFLDILKKLYNVYRGEDCELVEINPLV-ETGDGKLIAADAKVVID 223
Score = 50.0 bits (114), Expect = 8e-05
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
LN++EY+ + R++GIPVP V + + KF T + +K+Q+L GGRGK
Sbjct: 20 LNLYEYMGKDIFREYGIPVPNGYVVSSPQDVKKF-----TNPVAVKSQILLGGRGKA--- 71
Query: 361 NGLKGGVRMVNTPEVAGDIAGKML----KQLLVTKQTGGSRTNLQH 486
GG++ T E + +L + + VTK N++H
Sbjct: 72 ----GGIKFAKTDEELKNAVSTLLSTKVRNMTVTKVLIEDMLNIKH 113
>UniRef50_P72927 Cluster: Succinate--CoA ligase; n=3;
Chroococcales|Rep: Succinate--CoA ligase - Synechocystis
sp. (strain PCC 6803)
Length = 401
Score = 52.4 bits (120), Expect = 1e-05
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
++AI+++ PV++ SS+GG+++E + + + + + + + R+ K+G
Sbjct: 99 FLAIVLDYQRQCPVLMGSSEGGIDVETLLEQ------MQSVSLRTNFSPYLARRLAVKMG 152
Query: 708 LQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
L T G+I KMY+LF+ D +IE+NP A G+ LD K +D
Sbjct: 153 LTGPLVTAVSGIIGKMYELFVTYDLDVIEINPLGISA-DGEVMALDGKITVND 204
>UniRef50_Q2V0P7 Cluster: Succinyl-CoA synthetase beta subunit; n=4;
Peptococcaceae|Rep: Succinyl-CoA synthetase beta subunit
- Pelotomaculum thermopropionicum
Length = 369
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = +1
Query: 193 EYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNGLK 372
EY+ L +G+PVPK +A DEA K A E+ V+K+QVL G RGK
Sbjct: 3 EYMGKELFAKYGLPVPKGRMAPNPDEAAKIAAEIG-GPCVVKSQVLIGKRGKA------- 54
Query: 373 GGVRMVNTPEVA 408
GG++ N+PE A
Sbjct: 55 GGIKFPNSPEEA 66
Score = 44.0 bits (99), Expect = 0.005
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y++I ++ + PV+IAS+ GG++IE+ + + + + ID G+ V+ ++G
Sbjct: 99 YMSITVDGAAKMPVLIASAYGGMDIEE---QPEEYIIKKHIDPEMGMQAFIARDVVRQMG 155
Query: 708 LQEFATEAHG-----MIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+ AHG +I+ +Y +F + DA L+E+NP + DAK DD
Sbjct: 156 IS--LNSAHGKQLVSIIQTLYKIFKEQDAELVEINPLVFS--DDKVIAADAKVTIDD 208
>UniRef50_Q6LY86 Cluster: Succinate-CoA ligase (ADP-forming), beta
chain; n=3; Methanococcus maripaludis|Rep: Succinate-CoA
ligase (ADP-forming), beta chain - Methanococcus
maripaludis
Length = 362
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
YYV +++ R+ V+I S++GGV+IE+VA++ P+ + ++ +++K
Sbjct: 94 YYVGVVVNRNEKNNVVIFSTEGGVDIEEVASKTPEKIIKLSLNPEKEFLPYLARGMLKKA 153
Query: 705 GLQEF-ATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
G+ + ++ K+Y F D +L E+NP G+ DA DD
Sbjct: 154 GIPSAEIPKVADVLCKVYKAFKNMDGILAEINPLVFTE-DGKIIAADAVLNVDD 206
Score = 43.6 bits (98), Expect = 0.007
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKG--- 351
+ +HEY + + +++ IP+PK + K E+I + +V+KAQVL GGRGK
Sbjct: 1 MKLHEYEAKEIFKENNIPIPKNKLVSGKVESIDY-------PVVIKAQVLVGGRGKAGGI 53
Query: 352 TFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQ 456
F + + + + + + G++++++L+ +Q
Sbjct: 54 LFADNVDDANEKIES-LIGNTVKGELVEKVLLEEQ 87
>UniRef50_UPI0000F2DCF5 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 263
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 675 DQICRVIEKIGL-QEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKF 851
+Q R+ +K+G A + K+Y+LFLK DA ++E+NP D + G C+DAK
Sbjct: 20 EQAVRLAQKMGFPSNLVDSAADNMVKLYELFLKYDATMVEINPMLED-VDGGVLCMDAKI 78
Query: 852 RFD 860
FD
Sbjct: 79 NFD 81
>UniRef50_Q7VR89 Cluster: Succinyl-CoA synthetase beta chain; n=2;
Candidatus Blochmannia|Rep: Succinyl-CoA synthetase beta
chain - Blochmannia floridanus
Length = 399
Score = 47.6 bits (108), Expect = 4e-04
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Frame = +3
Query: 516 AGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAAEN---PDAMTYEPIDIVSGITDDQIC 686
A +Y++I+++R + + I S++GGV+IE+V E+ D + ID + G Q
Sbjct: 107 AHEFYLSILIDRDLSNIICIVSTKGGVDIENVIHESVSTSDVIYKISIDPLIGACAYQGR 166
Query: 687 RVIEKIGLQEFA-TEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFD 860
+ K+ L + M + +F++ D LIE+NP + CLDAK D
Sbjct: 167 LLASKLSLSGTQINQFTDMYINLVRMFIEKDLTLIEINPLIINK-NNDLLCLDAKVSID 224
Score = 39.9 bits (89), Expect = 0.084
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDI--VLKAQVLAGGRGKGT 354
+N++EY + L + IP+ K ++ E +E+ + ++K Q+ +GGRGK
Sbjct: 1 MNLYEYQAKQLFKQFNIPILKNHIITETSEIKDCISEIIKEGPPWIVKCQIRSGGRGKS- 59
Query: 355 FKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQT--GGSRTN 477
GGV++VN+ E A + + LVT QT G R N
Sbjct: 60 ------GGVQIVNSMEDMLAFANRWFGKNLVTYQTTVDGERVN 96
>UniRef50_Q110Z1 Cluster: Succinate--CoA ligase; n=2;
Oscillatoriales|Rep: Succinate--CoA ligase -
Trichodesmium erythraeum (strain IMS101)
Length = 405
Score = 46.8 bits (106), Expect = 7e-04
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y+A++++ PV++ S QGG++ E + + + + + R++ KIG
Sbjct: 99 YLAVVLDPIVRRPVLLGSKQGGIDTETAIK------SMQKVVVNQEFSPFYARRLMVKIG 152
Query: 708 LQEFATE-AHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
L+ E +++KMY LF++ D +IE+NP G+ LD K +D
Sbjct: 153 LEGKLIELVSHIVEKMYQLFVEKDLDMIEINPLGISP-KGEVMALDGKVSVND 204
>UniRef50_O67330 Cluster: Succinyl-CoA ligase beta subunit; n=4;
Bacteria|Rep: Succinyl-CoA ligase beta subunit - Aquifex
aeolicus
Length = 436
Score = 46.0 bits (104), Expect = 0.001
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y +I+ PV+ S +GG++IE+V PD + PI+ + G+ + + ++G
Sbjct: 102 YASIVYSTDHRAPVLTLSLEGGMDIEEVP---PDKVKSWPINPLKGLYPHMVRNYLLELG 158
Query: 708 L-QEF---ATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQ--FFCLDAKFRFDD 863
E+ + +I +M+D F +A L+E+NP A G+ LDA + DD
Sbjct: 159 FPHEYMPVLRKLSEVIARMWDAFWGAEARLLEINPLAIVDRGGKPDVLALDAVVKIDD 216
Score = 42.3 bits (95), Expect = 0.016
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +1
Query: 181 LNVHEYISYT-LLRDHGIPVPKFN-VAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGT 354
++++EY +Y + + +GIP PK+ V D+ ++F +L + V+K+QVL G RGK
Sbjct: 1 MDLYEYEAYDKIFKKYGIPTPKYMFVEHITDDVVEFVNQLG--ECVVKSQVLVGKRGKA- 57
Query: 355 FKNGLKGGVRMVNTPEVA 408
G VR+ + P+ A
Sbjct: 58 ------GAVRVCSNPDEA 69
>UniRef50_Q193A3 Cluster: ATP-dependent carboxylate-amine
ligase-like, ATP-grasp; n=3; Clostridia|Rep:
ATP-dependent carboxylate-amine ligase-like, ATP-grasp -
Desulfitobacterium hafniense (strain DCB-2)
Length = 425
Score = 46.0 bits (104), Expect = 0.001
Identities = 32/82 (39%), Positives = 43/82 (52%)
Frame = +1
Query: 193 EYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNGLK 372
EY L G+PVPK A T +EA + A E + +K QV AGGRGK
Sbjct: 6 EYQGKEWLAKAGMPVPKGRPASTPEEA-REAAEWIGGPVAVKGQVQAGGRGKA------- 57
Query: 373 GGVRMVNTPEVAGDIAGKMLKQ 438
G V++VNTP+ A A ++L +
Sbjct: 58 GIVKLVNTPDEAAAAAAEILSK 79
Score = 41.5 bits (93), Expect = 0.027
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +3
Query: 564 PVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIGL-QEFATEAHGM 740
P+++ S +GG++IE V D + +D ++G+ + K G+ E T+
Sbjct: 116 PMLMFSVEGGMDIESVP---EDKLLKINVDPINGLQTYDAVDLAAKAGIAPEELTKFAKF 172
Query: 741 IKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+ K+ + K D + +E+NP+ G C D K D+
Sbjct: 173 LTKLSQTYKKYDCMTLEINPFVMTG-NGNLICADCKMEIDN 212
>UniRef50_Q4J9C1 Cluster: Succinyl-CoA synthetase beta chain; n=4;
Sulfolobaceae|Rep: Succinyl-CoA synthetase beta chain -
Sulfolobus acidocaldarius
Length = 337
Score = 45.6 bits (103), Expect = 0.002
Identities = 31/117 (26%), Positives = 58/117 (49%)
Frame = +3
Query: 513 HAGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRV 692
H Y++ +++R P+I AS++GG++IE N + + I + GI + +
Sbjct: 81 HTRELYISALIDRDTAEPIIAASTEGGIDIE----SNSNVKIFH-IPMERGIRSYDVYNI 135
Query: 693 IEKIGLQEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+ +G++ ++K +Y L + DA L E+NP A G+ LD+K +D
Sbjct: 136 EKYLGVKGI----EPILKGLYRLITEFDAELAEINPLAV-TNDGKIIALDSKVILED 187
>UniRef50_A7DNB3 Cluster: Succinate--CoA ligase; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Succinate--CoA ligase
- Candidatus Nitrosopumilus maritimus SCM1
Length = 368
Score = 45.6 bits (103), Expect = 0.002
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y++I + RS IIAS +GGV IE V + + I + ++DD V +++G
Sbjct: 101 YLSIFLNRSKRCYTIIASDEGGVEIESVKNQ-----IIKEIGL-GEVSDDLAQEVAKEMG 154
Query: 708 LQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
L+ + A +KK+ L ++ +A L+E+NP A LD KF DD
Sbjct: 155 LEGKHAEGVVDTLKKLSKLTIEKEAELVEINPLAI-MQDDSITALDGKFVTDD 206
>UniRef50_Q39YX4 Cluster: Succinyl-CoA synthetase beta subunit-like;
n=1; Geobacter metallireducens GS-15|Rep: Succinyl-CoA
synthetase beta subunit-like - Geobacter metallireducens
(strain GS-15 / ATCC 53774 / DSM 7210)
Length = 423
Score = 44.0 bits (99), Expect = 0.005
Identities = 26/114 (22%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
YV+I + PV++ +++GGV++EDV E+ + + P V+G+ I + ++
Sbjct: 109 YVSISESSEYRMPVLLLTTKGGVDVEDVPPEDKRTIVFNP---VTGVKSFHINDALRELK 165
Query: 708 L-QEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQF--FCLDAKFRFD 860
++ + + K++ ++ +E+NP + G++ F D K FD
Sbjct: 166 CPPQYISSLVQHLPKLWQVYDNYGLTTLELNPIRMGKVKGRYVPFACDIKASFD 219
>UniRef50_Q8YQB9 Cluster: Succinyl-CoA synthetase beta chain; n=4;
Nostocaceae|Rep: Succinyl-CoA synthetase beta chain -
Anabaena sp. (strain PCC 7120)
Length = 408
Score = 41.5 bits (93), Expect = 0.027
Identities = 28/109 (25%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
+Y+A++++ + PV++ S++ +++E +A + M Y ++ + R+ K+
Sbjct: 98 FYLAVVLDTAVCRPVLLGSTEADIDLE-LADQK---MQYVVVE--QEFSPFYARRLALKM 151
Query: 705 GLQEFATEAHG-MIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAK 848
GLQ ++ +++KMY LF++ D L+E+NP + L G+ L+ K
Sbjct: 152 GLQGTLMQSVSTVLEKMYQLFVQKDLDLVEINPLGVN-LAGEVMALNGK 199
>UniRef50_Q8R6L7 Cluster: UDP-N-acetylmuramyl tripeptide synthase;
n=4; Clostridia|Rep: UDP-N-acetylmuramyl tripeptide
synthase - Thermoanaerobacter tengcongensis
Length = 879
Score = 40.7 bits (91), Expect = 0.048
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +1
Query: 211 LLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKN 363
+L+DHG+PVP+ +VA ++EAI A EL +V+K G +GKG N
Sbjct: 219 ILKDHGLPVPEGDVAYNEEEAISIAEELG-YPVVIKP--YNGNQGKGVHLN 266
>UniRef50_Q8KDG1 Cluster: Citrate lyase, subunit1; n=11;
Chlorobiaceae|Rep: Citrate lyase, subunit1 - Chlorobium
tepidum
Length = 398
Score = 40.7 bits (91), Expect = 0.048
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Frame = +3
Query: 513 HAGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRV 692
H +YV+I+ R +G ++ S GGV+IED N D++ I + T +Q+ +
Sbjct: 101 HDAEFYVSIIGNR--DGAELLISKYGGVDIED----NWDSVRRIQIPLDEHPTIEQLTAL 154
Query: 693 IEKIGLQEFATEAHGMI-KKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFD 860
++ G + E G I ++ F DA IE+NP +F LDA D
Sbjct: 155 AKEAGFEGEIAERVGKICSRLVLCFDNEDAQSIEINPLVIRKSDMRFAALDAVMNVD 211
>UniRef50_A6LP53 Cluster: Succinate--CoA ligase; n=1; Thermosipho
melanesiensis BI429|Rep: Succinate--CoA ligase -
Thermosipho melanesiensis BI429
Length = 338
Score = 40.3 bits (90), Expect = 0.063
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDE-AIKFATELNTKDIVLKAQVLAGGRGKGTF 357
+ ++E++ L ++HG+ +P+ + +KDE IKF VLK+QVL GGR K
Sbjct: 1 MKIYEFVGKQLFKEHGVKIPEGYLVTSKDELTIKFL------PAVLKSQVLVGGRMKA-- 52
Query: 358 KNGLKGGVRMVNTPEVAGDIAGKMLKQ 438
GG+ N D +LK+
Sbjct: 53 -----GGILFANNQREFYDYGNILLKK 74
Score = 37.5 bits (83), Expect = 0.45
Identities = 34/113 (30%), Positives = 53/113 (46%)
Frame = +3
Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
YY+++ +++ +I+ S GG+NIE+ A D V I D+ +V+ K
Sbjct: 96 YYLSMYIDKLEKDFMILFSEYGGINIEENA------------DKVIKINFDKY-KVLPK- 141
Query: 705 GLQEFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
+ H +I +Y L + D LIE+NP A + L G LDA DD
Sbjct: 142 -------KFHKIILTLYKLMKEKDLTLIEINPLA-ETLNGDLIALDAVLHLDD 186
>UniRef50_A0RTT8 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Cenarchaeum symbiosum|Rep: Succinyl-CoA synthetase,
beta subunit - Cenarchaeum symbiosum
Length = 365
Score = 39.5 bits (88), Expect = 0.11
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y+++ + RS +IAS++GGV IE V ++ + + + ++ + +V ++G
Sbjct: 98 YLSLFLNRSKRCYTVIASAEGGVEIESVKSQ-----IIKEVGL-GKVSPEVAAQVASEMG 151
Query: 708 LQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
L+ A + +++K+ L + +A L E+NP A G LD K DD
Sbjct: 152 LEGAAAKDLSDILQKLSLLTTEKEAELAEINPLAI-LSDGTLLALDGKVMTDD 203
Score = 35.9 bits (79), Expect = 1.4
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +1
Query: 193 EYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGK-GTFKNGL 369
EY + L ++GI VP+ +K ++A K A ++ V+K QV GGRGK G +
Sbjct: 2 EYQAKELFAEYGIKVPQGRASKGIEQARKDAKDIG-YPFVIKIQVPVGGRGKAGGIQKCT 60
Query: 370 KGGVRMVNTPEVAG-DIAGKMLKQLLVTKQTGGSR 471
++ P+V I G+ + +L+ K S+
Sbjct: 61 NEDELVLRYPQVYDLTIKGERARAILLEKMADISK 95
>UniRef50_Q1NU51 Cluster: Cyanophycin synthetase; n=3; delta
proteobacterium MLMS-1|Rep: Cyanophycin synthetase -
delta proteobacterium MLMS-1
Length = 891
Score = 39.1 bits (87), Expect = 0.15
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1
Query: 190 HEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIV 312
H+Y++ LL DHG+PVP +A ++A+K A +L +V
Sbjct: 225 HKYVANRLLVDHGLPVPPAGLAANLEQAVKLAEQLGWPVVV 265
>UniRef50_A0GFR9 Cluster: CoA-binding; n=1; Burkholderia
phytofirmans PsJN|Rep: CoA-binding - Burkholderia
phytofirmans PsJN
Length = 750
Score = 37.5 bits (83), Expect = 0.45
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQ 324
L++ E+ S LLRD+GI VPK +A+ +D+A A + +V+K Q
Sbjct: 504 LDLTEHASQALLRDYGIDVPKSGLAQNRDQACALARAIGF-PLVIKVQ 550
>UniRef50_Q8ZTH6 Cluster: Putative uncharacterized protein PAE3249;
n=3; Thermoproteaceae|Rep: Putative uncharacterized
protein PAE3249 - Pyrobaculum aerophilum
Length = 232
Score = 37.5 bits (83), Expect = 0.45
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +1
Query: 211 LLRDHGIPVPKFNVAKTKDEAIKFATEL 294
LLR +GIPVP+F VA+ ++EA+K A E+
Sbjct: 25 LLRAYGIPVPEFAVARDEEEAVKAAEEI 52
>UniRef50_Q58010 Cluster: Uncharacterized protein MJ0590; n=6;
Methanococcales|Rep: Uncharacterized protein MJ0590 -
Methanococcus jannaschii
Length = 704
Score = 37.5 bits (83), Expect = 0.45
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Frame = +1
Query: 160 SKQQVRHL--NVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATEL 294
+K+ ++ L N +EY + LL +G+PVPK +AK +DEA+++ +L
Sbjct: 478 NKEIIKELLSNPNEYTAKKLLSIYGLPVPKGYLAKNEDEALEYCKKL 524
>UniRef50_Q8DW15 Cluster: Glutathione biosynthesis bifunctional
protein gshAB (Gamma-GCS-GS) (GCS-GS) [Includes:
Glutamate--cysteine ligase (EC 6.3.2.2) (Gamma-
glutamylcysteine synthetase) (Gamma-ECS) (GCS);
Glutathione synthetase (EC 6.3.2.3) (Glutathione
synthase) (GSH synthetase) (GSH-S) (GSHase) (GS)]; n=17;
Streptococcus|Rep: Glutathione biosynthesis bifunctional
protein gshAB (Gamma-GCS-GS) (GCS-GS) [Includes:
Glutamate--cysteine ligase (EC 6.3.2.2) (Gamma-
glutamylcysteine synthetase) (Gamma-ECS) (GCS);
Glutathione synthetase (EC 6.3.2.3) (Glutathione
synthase) (GSH synthetase) (GSH-S) (GSHase) (GS)] -
Streptococcus mutans
Length = 754
Score = 37.5 bits (83), Expect = 0.45
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +1
Query: 190 HEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFK 360
++ ++ +LR++G PVP KDEA+++ +++ K IV+K + G G F+
Sbjct: 484 NKVVTKKILRENGYPVPAGAEFDNKDEALRYYSQIKNKPIVVKPKTTNFGLGISIFE 540
>UniRef50_Q9V1X5 Cluster: AcdB acetate--coA ligase (ADP-forming) (EC
6.2.1.13), beta chain; n=8; Thermococcaceae|Rep: AcdB
acetate--coA ligase (ADP-forming) (EC 6.2.1.13), beta
chain - Pyrococcus abyssi
Length = 232
Score = 37.1 bits (82), Expect = 0.59
Identities = 13/28 (46%), Positives = 24/28 (85%)
Frame = +1
Query: 211 LLRDHGIPVPKFNVAKTKDEAIKFATEL 294
+L+ +GIP+P+F VA+ ++EA+KF+ E+
Sbjct: 29 ILKLYGIPIPEFKVARDEEEAVKFSREI 56
>UniRef50_Q5V719 Cluster: Putative uncharacterized protein; n=1;
Haloarcula marismortui|Rep: Putative uncharacterized
protein - Haloarcula marismortui (Halobacterium
marismortui)
Length = 300
Score = 36.7 bits (81), Expect = 0.78
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Frame = +3
Query: 495 SPRGSSHAGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITD 674
SP GSS ++ E SF GP ++ + +++ + PD T+E + G T
Sbjct: 49 SPTGSSSTSPSTDSVFEEISFAGPNLVVTLADDHDVDQLNLIGPDGTTFEQSTVAQGATR 108
Query: 675 DQICRVIEKIGLQEFATE-----AHGMIKKMYDLFLKXDALLIEVNP 800
+I +++ K G A E G + L L+ D +++V P
Sbjct: 109 VEI-QIVFKTGGTYSAGEYELVAVSGETSESMSLELRPDIQIVDVEP 154
>UniRef50_A0LDT1 Cluster: ATP-grasp domain protein; n=5;
Proteobacteria|Rep: ATP-grasp domain protein -
Magnetococcus sp. (strain MC-1)
Length = 424
Score = 35.9 bits (79), Expect = 1.4
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +3
Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
Y +I + P + + GGV+IE++ P+ + P D ++G + + ++G
Sbjct: 108 YFSITDSTKYRAPTVTITHHGGVDIEELP---PEKIATVPFDPLTGFKGFVVSNALTRLG 164
Query: 708 L-QEFATEAHGMIKKMYDLFLKXDALLIEVNP 800
E + + K++DL+ +E+NP
Sbjct: 165 APNEIISPLVQNLPKLWDLYHNYGMTTLELNP 196
>UniRef50_A0DDG8 Cluster: Chromosome undetermined scaffold_46, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_46,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 2450
Score = 35.9 bits (79), Expect = 1.4
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -2
Query: 435 FKHLSCYITSNFRCVDHSNSTFKSILKGTFPST-TSKNLC 319
+ + +CY SNF+C++ + +K++L T T T+ NLC
Sbjct: 811 YTNSNCYFDSNFKCIEVKDEPYKNVLLNTLNCTQTNLNLC 850
>UniRef50_A7HMU2 Cluster: Succinate--CoA ligase; n=1;
Fervidobacterium nodosum Rt17-B1|Rep: Succinate--CoA
ligase - Fervidobacterium nodosum Rt17-B1
Length = 355
Score = 35.5 bits (78), Expect = 1.8
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTK---DIVLKAQVLAGGRGK 348
+ + EY+ LL +HG VP+ K +D K T+ + VLK+QVL GGR K
Sbjct: 1 MKIQEYVGKRLLSEHGFYVPRSLFVKEEDIDSKELTQKILELGFPQVLKSQVLVGGRMK 59
>UniRef50_Q73GS8 Cluster: Membrane protein, putative; n=13;
Wolbachia|Rep: Membrane protein, putative - Wolbachia
pipientis wMel
Length = 1242
Score = 35.1 bits (77), Expect = 2.4
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = -2
Query: 438 LFKHLSCYITSNFRCVDHSNSTFKSILKGTFPSTTSKNLCF*NYVFG-IEFCGKLNCLIL 262
++ +L C + N C +H NS ++ + F + K+ F N+V + ++ L+
Sbjct: 301 IYNYLKCVLLINENCKEHFNSNDPAVAQAMFENIAEKSTSFHNFVLSLLVLFVMISSLLY 360
Query: 261 GFGHIKFGYRNSMVP**SITYVFMYIQVADLLF 163
FG I+ + ++ IT V + I F
Sbjct: 361 LFGMIRETKHDMLIRMMKITLVIVLISPGSFRF 393
>UniRef50_Q1VJG9 Cluster: Succinyl-CoA synthetase, beta subunit;
n=1; Psychroflexus torquis ATCC 700755|Rep: Succinyl-CoA
synthetase, beta subunit - Psychroflexus torquis ATCC
700755
Length = 247
Score = 35.1 bits (77), Expect = 2.4
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 663 GITDDQICRVIEKIGLQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQ-FFC 836
G+ + I + I+ L ++ E H +I K+Y LF + D L+EVNP A+T Q
Sbjct: 15 GLDSNMINQAIKDAKLNLDYIDELHEIIYKLYTLFTEGDCDLVEVNPL---AITKQGVTA 71
Query: 837 LDAKFRFD 860
LD+K D
Sbjct: 72 LDSKVSLD 79
>UniRef50_P07244 Cluster: Bifunctional purine biosynthetic protein
ADE5,7 [Includes: Phosphoribosylamine--glycine ligase
(EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide
synthetase) (Phosphoribosylglycinamide synthetase);
Phosphoribosylformylglycinamidine cyclo-ligase (EC
6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole
synthetase) (AIR synthase)]; n=12; cellular
organisms|Rep: Bifunctional purine biosynthetic protein
ADE5,7 [Includes: Phosphoribosylamine--glycine ligase
(EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide
synthetase) (Phosphoribosylglycinamide synthetase);
Phosphoribosylformylglycinamidine cyclo-ligase (EC
6.3.3.1) (AIRS) (Phosphoribosyl-aminoimidazole
synthetase) (AIR synthase)] - Saccharomyces cerevisiae
(Baker's yeast)
Length = 802
Score = 34.7 bits (76), Expect = 3.2
Identities = 24/109 (22%), Positives = 43/109 (39%)
Frame = +1
Query: 154 FPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLA 333
F + L + S + H IP ++V +EAI F K V+KA +A
Sbjct: 97 FGPSVKAAQLEASKAFSKRFMSKHNIPTASYDVFTNPEEAISFLQAHTDKAFVIKADGIA 156
Query: 334 GGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGGSRTNL 480
G+G + + V+ + V + KQ+++ + G +L
Sbjct: 157 AGKGV-IIPSSIDESVQAIKDIMVTKQFGEEAGKQVVIEQFLEGDEISL 204
>UniRef50_Q26CD7 Cluster: Putative nucleoside diphosphate sugar
pyrophosphorylase; n=1; Flavobacteria bacterium
BBFL7|Rep: Putative nucleoside diphosphate sugar
pyrophosphorylase - Flavobacteria bacterium BBFL7
Length = 347
Score = 34.3 bits (75), Expect = 4.2
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 163 KQQVRHLNVHEYISYTLLRDHGIPV-PKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGG 339
KQ V H+ ++I ++ R+ I + P N KT + E+ + L+ ++AGG
Sbjct: 70 KQFVHHIENGDFIDLSVYREQNIKILPVLNNDKTLSRILDL--EITKSTLPLECMIMAGG 127
Query: 340 RGK 348
RGK
Sbjct: 128 RGK 130
>UniRef50_Q0RTX1 Cluster: Putative carboxylase; n=1; Frankia alni
ACN14a|Rep: Putative carboxylase - Frankia alni (strain
ACN14a)
Length = 473
Score = 34.3 bits (75), Expect = 4.2
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Frame = +1
Query: 220 DHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGG-----------RGKGTFKNG 366
+HG+P +F A DEA+ A ++ +VLK +LAGG F +
Sbjct: 123 EHGLPTVRFGTAGRLDEALAIAADIG-YPVVLK-PLLAGGSLFVWTVHDPAELAAAFDDV 180
Query: 367 LKGGVRMV-NTPEVAGDIAGKMLKQLLVTKQTGGSR 471
L+GG ++V P V G +LLV + GG R
Sbjct: 181 LRGGAQVVAGDPLVHATFRGGAAPRLLVEQLIGGRR 216
>UniRef50_Q653A4 Cluster: Basic helix-loop-helix-like; n=4; Oryza
sativa|Rep: Basic helix-loop-helix-like - Oryza sativa
subsp. japonica (Rice)
Length = 396
Score = 34.3 bits (75), Expect = 4.2
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -3
Query: 464 PPVCFVTRSCLSIFPAISPATSGVLTIRTPPLSPFLKVPF-PR-PPARTCAFRTMSL 300
PP C P +SP L TPPLSP L VP PR PP +R + L
Sbjct: 210 PPATVAASCCSPRPPQLSPRLPPQLLKSTPPLSPRLAVPISPRTPPTPGSPYRLLRL 266
>UniRef50_A1WYS2 Cluster: Phosphoribosylaminoimidazole carboxylase,
ATPase subunit; n=5; cellular organisms|Rep:
Phosphoribosylaminoimidazole carboxylase, ATPase subunit
- Halorhodospira halophila (strain DSM 244 / SL1)
(Ectothiorhodospirahalophila (strain DSM 244 / SL1))
Length = 384
Score = 33.9 bits (74), Expect = 5.5
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +1
Query: 139 SSANKFPSKQQVRHLNV--HEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIV 312
++A + P + R L H + T LR+HG+PV F +EA + ++
Sbjct: 89 AAAERLPVRPSPRALATTQHRILEKTFLREHGLPVVPFEAVHGPEEAAAAVARIGAPAVI 148
Query: 313 LKAQVLAGGRGK 348
A + G+G+
Sbjct: 149 KSAGLGYDGKGQ 160
>UniRef50_A1IDG9 Cluster: Putative uncharacterized protein; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
uncharacterized protein - Candidatus Desulfococcus
oleovorans Hxd3
Length = 253
Score = 33.9 bits (74), Expect = 5.5
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +1
Query: 181 LNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKA 321
L + EY + +L +G+PV + +AKT DEA+ A EL +VLKA
Sbjct: 40 LALSEYEAKQVLAAYGVPVTREVLAKTPDEAVAAAGELG-YPVVLKA 85
>UniRef50_A5C939 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 674
Score = 33.9 bits (74), Expect = 5.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 376 GVRMVNTPEVAGDIAGKMLKQLLVTKQTGGSRTNLQHG--HGHREE 507
GV ++TP +I K+ + LL TK+ + N + G H HREE
Sbjct: 187 GVHNLHTPTQGEEIVNKLSEALLPTKEASSNNNNGREGSFHSHREE 232
>UniRef50_Q4J9J2 Cluster: Phosphoribosylaminoimidazole carboxylase
ATPase; n=3; Sulfolobaceae|Rep:
Phosphoribosylaminoimidazole carboxylase ATPase -
Sulfolobus acidocaldarius
Length = 364
Score = 33.9 bits (74), Expect = 5.5
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +1
Query: 154 FPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLA 333
FP V L Y ++H +P P+F VA+ +EA+K E VLK + L
Sbjct: 89 FPGINSVE-LKRERYKEKLYYKEHNLPTPRFLVAEDGEEALKILKEEFNGIGVLK-ESLG 146
Query: 334 GGRGKGTF 357
G GKG +
Sbjct: 147 GYDGKGQY 154
>UniRef50_A2SRS8 Cluster: CoA-binding domain protein; n=4;
Methanomicrobiales|Rep: CoA-binding domain protein -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 707
Score = 33.9 bits (74), Expect = 5.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 205 YTLLRDHGIPVPKFNVAKTKDEAIKFATEL 294
Y LLR +P P F + +T D+A K AT++
Sbjct: 35 YDLLRQFNVPAPAFEIVQTPDDAAKAATKI 64
>UniRef50_P47661 Cluster: Uncharacterized protein MG422; n=4;
Mycoplasma genitalium|Rep: Uncharacterized protein MG422
- Mycoplasma genitalium
Length = 835
Score = 33.9 bits (74), Expect = 5.5
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +1
Query: 49 LCVKMAIVLPRSLGFAETILFRYGNKILTASSANKFPSKQQVRHLNVHEYISYTLLRDHG 228
L ++ + + G A+ LF+YGN ++ + ++ + QV LN Y + L+ +H
Sbjct: 20 LMIRTSFLDANYFGVAKLSLFKYGNYLIDNLNQAQWKTLSQVLQLNKQPYSGFLLVNNHQ 79
Query: 229 -IPVP--KFNVAKTKD 267
+P+ KFN+ + D
Sbjct: 80 YLPLQKIKFNLCEEID 95
>UniRef50_Q4SMD7 Cluster: Chromosome 3 SCAF14553, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF14553, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1036
Score = 33.5 bits (73), Expect = 7.3
Identities = 19/72 (26%), Positives = 29/72 (40%)
Frame = +1
Query: 130 LTASSANKFPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDI 309
L A+ F + L + S + HGIP ++ EA F + +
Sbjct: 86 LQAAGVPCFGPSAKAAQLEASKSFSKAFMERHGIPTARYGSFTDPQEACNFIRSADFPAL 145
Query: 310 VLKAQVLAGGRG 345
V+KA LA G+G
Sbjct: 146 VVKASGLAAGKG 157
>UniRef50_Q5P5S5 Cluster: Predicted Acetyl-CoA synthetase; n=4;
Proteobacteria|Rep: Predicted Acetyl-CoA synthetase -
Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 727
Score = 33.5 bits (73), Expect = 7.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 169 QVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLK 318
Q N+ E+ + TLLR HG+ VP + + DE + A + +V+K
Sbjct: 498 QAEARNLFEFEAKTLLRAHGVDVPAEALVRNVDELDEVAARFGDRPLVMK 547
>UniRef50_Q24FD5 Cluster: Protein kinase domain containing protein;
n=2; Oligohymenophorea|Rep: Protein kinase domain
containing protein - Tetrahymena thermophila SB210
Length = 957
Score = 33.5 bits (73), Expect = 7.3
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 445 VTKQTGGSRTNLQHGHGHREEVPTQGNTTWQS*WNAVSMVQSS-LLHLKVVST 600
+ Q G+ N G + P QGN+ W WN + S LLH K+ +T
Sbjct: 343 INNQISGTNQNQHQNQGTPSQQP-QGNSAWTDWWNKKRKINSDLLLHAKINNT 394
>UniRef50_A2BMF5 Cluster: Conserved archaeal protein; n=2;
Archaea|Rep: Conserved archaeal protein - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 238
Score = 33.5 bits (73), Expect = 7.3
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +1
Query: 193 EYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLK 318
E+ +Y + +G+PVP++ +A+ DEA + + E+ +VLK
Sbjct: 21 EHEAYAVAEAYGLPVPRYGLARDPDEAARLSREIGF-PVVLK 61
>UniRef50_P77886 Cluster: Carbamoyl-phosphate synthase
pyrimidine-specific large chain; n=32; Firmicutes|Rep:
Carbamoyl-phosphate synthase pyrimidine-specific large
chain - Lactobacillus plantarum
Length = 1058
Score = 33.5 bits (73), Expect = 7.3
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +1
Query: 211 LLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKG 351
L+ + G PVP +A+T DEA+ FA + IV A + GG G G
Sbjct: 135 LMEELGEPVPASGIARTVDEALAFAKQAGYPVIVRPAFTM-GGTGGG 180
>UniRef50_Q4SK98 Cluster: Chromosome 13 SCAF14566, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF14566, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 251
Score = 33.1 bits (72), Expect = 9.6
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +1
Query: 262 KDEAIKFATELNTKDIVLKAQVLAGGRGKGTF-----KNGLKGGVRMVNTPEVAGDIAGK 426
+D I+ A EL + + L A+ AGG+G + GL+ G+ N P A I G+
Sbjct: 18 RDRWIRVAAELTRETLTLTAEAEAGGQGANYWDYTSGSAGLRNGLSNGNEPGSAAGIPGR 77
Query: 427 MLKQLL 444
QLL
Sbjct: 78 GQDQLL 83
>UniRef50_Q47X73 Cluster: Pyridoxamine 5'-phosphate oxidase /
oxidoreductase, NAD-dependent; n=4; Proteobacteria|Rep:
Pyridoxamine 5'-phosphate oxidase / oxidoreductase,
NAD-dependent - Colwellia psychrerythraea (strain 34H /
ATCC BAA-681) (Vibriopsychroerythus)
Length = 558
Score = 33.1 bits (72), Expect = 9.6
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 238 PKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKGTFKNGLKGGVRMVNTPEVAGD 414
P+++ ++ + I EL+ LK Q LA G+G KN V + + P+++G+
Sbjct: 171 PRYSESEIESLIIPLTNELSDLKAQLKTQQLASSSGEGLSKNSAVAKVSLPDYPKISGE 229
>UniRef50_O69824 Cluster: Putative uncharacterized protein SCO6430;
n=1; Streptomyces coelicolor|Rep: Putative
uncharacterized protein SCO6430 - Streptomyces
coelicolor
Length = 630
Score = 33.1 bits (72), Expect = 9.6
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 422 PAISPATSGVLTIRTPPL-SPFLKVPFPRPPARTCA 318
PA P SGV + P +P L+VP+P PART A
Sbjct: 525 PAHKPPVSGVPALEAPAAETPALEVPYPDTPARTGA 560
>UniRef50_Q1I3D8 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas entomophila L48|Rep: Putative
uncharacterized protein - Pseudomonas entomophila
(strain L48)
Length = 339
Score = 33.1 bits (72), Expect = 9.6
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 256 KTKDEAIKFA-TELNTKDIVLKAQVLAGGRGKGTFK 360
KT DE I+ T LNT +IVL Q L R KG FK
Sbjct: 126 KTNDEEIRNTFTRLNTNNIVLNDQELRNARYKGLFK 161
>UniRef50_Q18UC2 Cluster: Cyanophycin synthetase; n=2;
Desulfitobacterium hafniense|Rep: Cyanophycin synthetase
- Desulfitobacterium hafniense (strain DCB-2)
Length = 885
Score = 33.1 bits (72), Expect = 9.6
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 211 LLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRGKG-TFKNGLKGGVR 384
LL + GIPVP V + +DEA++ +L D ++ + G +GKG T K G + VR
Sbjct: 222 LLYEGGIPVPDGVVTRNEDEAVEVFRQL---DRLVVVKPYNGNQGKGVTLKLGTEAEVR 277
>UniRef50_Q08NX5 Cluster: Xylosidase/arabinosidase; n=1; Stigmatella
aurantiaca DW4/3-1|Rep: Xylosidase/arabinosidase -
Stigmatella aurantiaca DW4/3-1
Length = 703
Score = 33.1 bits (72), Expect = 9.6
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = +3
Query: 438 TPSNKTNRGQQDEFATWSWSPRGSSHAGXYYVAIMMERSFNGPVIIASSQGGVNIEDVAA 617
T ++ GQ EF + +P ++ + +A S +G + ASS+GG N+ +
Sbjct: 158 TANSGATGGQLSEFEVYGSAPPTANRSAFNQIAASSYDSQSGTQLEASSEGGQNVAFI-- 215
Query: 618 ENPDAMTYEPIDIVSGIT 671
++ D++ + +D G T
Sbjct: 216 DSGDSIAFNNVDFGGGAT 233
>UniRef50_A6S124 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 342
Score = 33.1 bits (72), Expect = 9.6
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +1
Query: 340 RGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGGSRTNLQHGHGHREEV 510
+G+ F N K V M +TPE AGD K +K+ L + GGS +++ G G RE++
Sbjct: 70 KGREQFLNYFKDAVDMGDTPEGAGD---KWVKRELEGQGEGGS--HVRRGDGTREQL 121
>UniRef50_O32321 Cluster: Pesticidal crystal protein cry20Aa
(Insecticidal delta-endotoxin CryXXA(a)); n=1; Bacillus
thuringiensis serovar fukuokaensis|Rep: Pesticidal
crystal protein cry20Aa (Insecticidal delta-endotoxin
CryXXA(a)) - Bacillus thuringiensis subsp. fukuokaensis
Length = 753
Score = 33.1 bits (72), Expect = 9.6
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -3
Query: 692 NTANLIISNTRNNINRFISHCIRIFSCNIFNVDTTLR*SNDDWTIETAFHHD 537
+TAN+ ++ R IN +I+HC R + + D + R + ++W A+ D
Sbjct: 213 STANVNLNILRAAINEYITHCTRWYQDGLNRFDRSSRANMNEWRRFNAYRRD 264
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 851,572,653
Number of Sequences: 1657284
Number of extensions: 17873221
Number of successful extensions: 50455
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 47901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50297
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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