Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_M11
(883 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF260822-1|AAG02020.1| 138|Tribolium castaneum alpha-esterase l... 25 0.60
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 24 1.4
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.8
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.8
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.8
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.8
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.8
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 23 2.4
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 23 2.4
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 23 2.4
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 22 7.3
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 22 7.3
>AF260822-1|AAG02020.1| 138|Tribolium castaneum alpha-esterase like
protein E3 protein.
Length = 138
Score = 25.4 bits (53), Expect = 0.60
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -2
Query: 357 KGTFPSTTSKNLCF*NYVFGIEFCGKLNCLILGF--GHIKFGYRNSMVP 217
+G +T N+C+ +F + G NCL+L +I G S+ P
Sbjct: 26 EGVLDATKPGNVCYQRDLFRQKITGSENCLVLNVYTRNIPDGIHTSLYP 74
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 24.2 bits (50), Expect = 1.4
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -2
Query: 465 APCLFCY*ELFKHLS--CYITSNFRCVDHSNS 376
AP L + +F +LS CY+T + +DH+ S
Sbjct: 130 APVLQLFLYIFTYLSVTCYVTYAWSPIDHTES 161
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 618 ENPDAMTYEPIDIVSGITDDQICRVIEK 701
E P A EP+++ G+T QI V EK
Sbjct: 19 ERPVANESEPLEVKFGLTLQQIIDVDEK 46
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 618 ENPDAMTYEPIDIVSGITDDQICRVIEK 701
E P A EP+++ G+T QI V EK
Sbjct: 19 ERPVANESEPLEVKFGLTLQQIIDVDEK 46
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 618 ENPDAMTYEPIDIVSGITDDQICRVIEK 701
E P A EP+++ G+T QI V EK
Sbjct: 19 ERPVANESEPLEVKFGLTLQQIIDVDEK 46
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 618 ENPDAMTYEPIDIVSGITDDQICRVIEK 701
E P A EP+++ G+T QI V EK
Sbjct: 19 ERPVANESEPLEVKFGLTLQQIIDVDEK 46
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 618 ENPDAMTYEPIDIVSGITDDQICRVIEK 701
E P A EP+++ G+T QI V EK
Sbjct: 19 ERPVANESEPLEVKFGLTLQQIIDVDEK 46
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 861 RQI*TWHPNRRIVLSRHLR 805
RQI W NRR+ L + LR
Sbjct: 48 RQIKIWFQNRRMKLKKELR 66
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 861 RQI*TWHPNRRIVLSRHLR 805
RQI W NRR+ L + LR
Sbjct: 199 RQIKIWFQNRRMKLKKELR 217
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 861 RQI*TWHPNRRIVLSRHLR 805
RQI W NRR+ L + LR
Sbjct: 258 RQIKIWFQNRRMKLKKELR 276
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 404 TSGVLTIRTPPLSPFLKVPFPRP 336
T+G + + PP+ PF +P P
Sbjct: 153 TAGSMGLTRPPMYPFPAGQYPYP 175
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 404 TSGVLTIRTPPLSPFLKVPFPRP 336
T+G + + PP+ PF +P P
Sbjct: 45 TAGSMGLTRPPMYPFPAGQYPYP 67
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,775
Number of Sequences: 336
Number of extensions: 4852
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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