Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_M11
         (883 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058331-1|AAL13560.1|  503|Drosophila melanogaster GH10480p pro...   148   9e-36
AE014297-840|AAF54308.2|  502|Drosophila melanogaster CG11963-PA...   145   8e-35
AY051980-1|AAK93404.1|  416|Drosophila melanogaster LD44970p pro...    78   1e-14
AJ252069-1|CAB64384.1|  416|Drosophila melanogaster putative suc...    78   1e-14
AE014296-966|AAF50771.1|  416|Drosophila melanogaster CG10622-PA...    78   1e-14
AE014296-967|AAN12099.1|  112|Drosophila melanogaster CG10622-PB...    68   2e-11
Y14162-1|CAA74575.1|  478|Drosophila melanogaster fizzy-related ...    29   6.4  
BT010011-1|AAQ22480.1|  478|Drosophila melanogaster RE20929p pro...    29   6.4  
BT001403-1|AAN71158.1|  478|Drosophila melanogaster GH07620p pro...    29   6.4  
AE014298-661|AAN09125.1|  478|Drosophila melanogaster CG3000-PB,...    29   6.4  
AE014298-660|AAF45973.1|  478|Drosophila melanogaster CG3000-PA,...    29   6.4  

>AY058331-1|AAL13560.1|  503|Drosophila melanogaster GH10480p
           protein.
          Length = 503

 Score =  148 bits (359), Expect = 9e-36
 Identities = 66/114 (57%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
 Frame = +3

Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
           +Y A+MMER+FNGPV+IAS +GGV+IE+VAA +PDA+ YEPIDI +G+T +Q  ++++K+
Sbjct: 152 FYFAVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKV 211

Query: 705 GLQEFATEAH-GMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
           GL     + H  M+  +YDLF+K DALL+E+NPYA DA++G FF LDAK RFDD
Sbjct: 212 GLGGDGEDTHVQMLLNLYDLFVKKDALLVEINPYAEDAMSGCFFALDAKLRFDD 265



 Score =  132 bits (318), Expect = 8e-31
 Identities = 63/101 (62%), Positives = 80/101 (79%)
 Frame = +1

Query: 166 QQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRG 345
           QQ+R+LNV E++SY+LL +  IP P+F VAK   EA   AT+L T ++VLKAQVLAGGRG
Sbjct: 33  QQLRNLNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRG 92

Query: 346 KGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGGS 468
           KGTFKNGLKGGVR+V  P+ A +++ KM+ QLLVTKQTG +
Sbjct: 93  KGTFKNGLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAA 133



 Score = 39.5 bits (88), Expect = 0.006
 Identities = 17/20 (85%), Positives = 17/20 (85%)
 Frame = +2

Query: 461 GAAGRICNMVMVTERKFPRR 520
           GAAGRIC  VMV ERKFPRR
Sbjct: 131 GAAGRICKKVMVAERKFPRR 150


>AE014297-840|AAF54308.2|  502|Drosophila melanogaster CG11963-PA
           protein.
          Length = 502

 Score =  145 bits (351), Expect = 8e-35
 Identities = 66/114 (57%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
 Frame = +3

Query: 525 YYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKI 704
           +Y A+MMER+FNGPV+IAS +GGV+IE+VAA +PDA+ YEPIDI +G+T +Q  ++++K+
Sbjct: 152 FYFAVMMERAFNGPVLIASKEGGVDIEEVAASSPDAILYEPIDIGTGLTSEQAEKIVKKV 211

Query: 705 GLQEFATEAH-GMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
           GL     + H  M+  +YDLF+K DALL+E+NPYA DA++G FF LDAK RFDD
Sbjct: 212 GLGGDGEDTHVQMLLNLYDLFVKKDALLVEINPYAEDAMSG-FFALDAKLRFDD 264



 Score =  132 bits (318), Expect = 8e-31
 Identities = 63/101 (62%), Positives = 80/101 (79%)
 Frame = +1

Query: 166 QQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLKAQVLAGGRG 345
           QQ+R+LNV E++SY+LL +  IP P+F VAK   EA   AT+L T ++VLKAQVLAGGRG
Sbjct: 33  QQLRNLNVQEHVSYSLLNEAKIPTPRFAVAKNGKEANDIATKLKTDNLVLKAQVLAGGRG 92

Query: 346 KGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQTGGS 468
           KGTFKNGLKGGVR+V  P+ A +++ KM+ QLLVTKQTG +
Sbjct: 93  KGTFKNGLKGGVRVVYDPQTAEELSSKMIDQLLVTKQTGAA 133



 Score = 39.5 bits (88), Expect = 0.006
 Identities = 17/20 (85%), Positives = 17/20 (85%)
 Frame = +2

Query: 461 GAAGRICNMVMVTERKFPRR 520
           GAAGRIC  VMV ERKFPRR
Sbjct: 131 GAAGRICKKVMVAERKFPRR 150


>AY051980-1|AAK93404.1|  416|Drosophila melanogaster LD44970p
           protein.
          Length = 416

 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
 Frame = +3

Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
           Y+ I+++R  NGPV+IAS  GG++IE VA E P+ +   P+DI   I +  +  V + + 
Sbjct: 138 YLCILLDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLLEVAKFLE 197

Query: 708 LQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
            + +        I+K+Y LF   DA+ IE+NP A +   G+   +DAK  FDD
Sbjct: 198 FKGDSVKRCAEEIQKLYTLFKAVDAVQIEINPLA-ETDKGEVISVDAKLNFDD 249



 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 39/107 (36%), Positives = 58/107 (54%)
 Frame = +1

Query: 139 SSANKFPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLK 318
           ++A     K  VR+LN+ E+ S  LL+ +G+ + +F V        +        + V+K
Sbjct: 9   TTARHIVHKVPVRNLNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFECPEYVVK 68

Query: 319 AQVLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQT 459
           AQ+LAGGRGKGTF NG KGGV +         +  +M+   L+TKQT
Sbjct: 69  AQILAGGRGKGTFDNGFKGGVHITTNKSEVLSLTQQMIGNRLITKQT 115


>AJ252069-1|CAB64384.1|  416|Drosophila melanogaster putative
           succinyl-coa ligase (GDP-forming) beta-chain precursor
           protein.
          Length = 416

 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
 Frame = +3

Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
           Y+ I+++R  NGPV+IAS  GG++IE VA E P+ +   P+DI   I +  +  V + + 
Sbjct: 138 YLCILLDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLLEVAKFLE 197

Query: 708 LQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
            + +        I+K+Y LF   DA+ IE+NP A +   G+   +DAK  FDD
Sbjct: 198 FKGDSVKRCAEEIQKLYTLFKAVDAVQIEINPLA-ETDKGEVISVDAKLNFDD 249



 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 39/107 (36%), Positives = 58/107 (54%)
 Frame = +1

Query: 139 SSANKFPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLK 318
           ++A     K  VR+LN+ E+ S  LL+ +G+ + +F V        +        + V+K
Sbjct: 9   TTARHIVHKVPVRNLNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFECPEYVVK 68

Query: 319 AQVLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQT 459
           AQ+LAGGRGKGTF NG KGGV +         +  +M+   L+TKQT
Sbjct: 69  AQILAGGRGKGTFDNGFKGGVHITTNKSEVLSLTQQMIGNRLITKQT 115


>AE014296-966|AAF50771.1|  416|Drosophila melanogaster CG10622-PA,
           isoform A protein.
          Length = 416

 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
 Frame = +3

Query: 528 YVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDAMTYEPIDIVSGITDDQICRVIEKIG 707
           Y+ I+++R  NGPV+IAS  GG++IE VA E P+ +   P+DI   I +  +  V + + 
Sbjct: 138 YLCILLDREHNGPVLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLLEVAKFLE 197

Query: 708 LQ-EFATEAHGMIKKMYDLFLKXDALLIEVNPYAXDALTGQFFCLDAKFRFDD 863
            + +        I+K+Y LF   DA+ IE+NP A +   G+   +DAK  FDD
Sbjct: 198 FKGDSVKRCAEEIQKLYTLFKAVDAVQIEINPLA-ETDKGEVISVDAKLNFDD 249



 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 39/107 (36%), Positives = 58/107 (54%)
 Frame = +1

Query: 139 SSANKFPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLK 318
           ++A     K  VR+LN+ E+ S  LL+ +G+ + +F V        +        + V+K
Sbjct: 9   TTARHIVHKVPVRNLNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFECPEYVVK 68

Query: 319 AQVLAGGRGKGTFKNGLKGGVRMVNTPEVAGDIAGKMLKQLLVTKQT 459
           AQ+LAGGRGKGTF NG KGGV +         +  +M+   L+TKQT
Sbjct: 69  AQILAGGRGKGTFDNGFKGGVHITTNKSEVLSLTQQMIGNRLITKQT 115


>AE014296-967|AAN12099.1|  112|Drosophila melanogaster CG10622-PB,
           isoform B protein.
          Length = 112

 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 33/83 (39%), Positives = 48/83 (57%)
 Frame = +1

Query: 139 SSANKFPSKQQVRHLNVHEYISYTLLRDHGIPVPKFNVAKTKDEAIKFATELNTKDIVLK 318
           ++A     K  VR+LN+ E+ S  LL+ +G+ + +F V        +        + V+K
Sbjct: 9   TTARHIVHKVPVRNLNLLEFQSKDLLQKYGVAIQQFKVLNNSKADAEVVKTFECPEYVVK 68

Query: 319 AQVLAGGRGKGTFKNGLKGGVRM 387
           AQ+LAGGRGKGTF NG KGGV +
Sbjct: 69  AQILAGGRGKGTFDNGFKGGVHI 91


>Y14162-1|CAA74575.1|  478|Drosophila melanogaster fizzy-related
           protein protein.
          Length = 478

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = -3

Query: 230 IPWSRSRV*L--MYSCTFKWRTCCLLGNLLAEDAVNILFPYLNNIVSAKPRERGNTIAIL 57
           + WS   V    + SC + W  C      L +     L P  N + S    ERGNT+A+ 
Sbjct: 178 VDWSSQNVLAVGLGSCVYLWSACTSQVTRLCD-----LSPDANTVTSVSWNERGNTVAVG 232

Query: 56  T 54
           T
Sbjct: 233 T 233


>BT010011-1|AAQ22480.1|  478|Drosophila melanogaster RE20929p
           protein.
          Length = 478

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = -3

Query: 230 IPWSRSRV*L--MYSCTFKWRTCCLLGNLLAEDAVNILFPYLNNIVSAKPRERGNTIAIL 57
           + WS   V    + SC + W  C      L +     L P  N + S    ERGNT+A+ 
Sbjct: 178 VDWSSQNVLAVGLGSCVYLWSACTSQVTRLCD-----LSPDANTVTSVSWNERGNTVAVG 232

Query: 56  T 54
           T
Sbjct: 233 T 233


>BT001403-1|AAN71158.1|  478|Drosophila melanogaster GH07620p
           protein.
          Length = 478

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = -3

Query: 230 IPWSRSRV*L--MYSCTFKWRTCCLLGNLLAEDAVNILFPYLNNIVSAKPRERGNTIAIL 57
           + WS   V    + SC + W  C      L +     L P  N + S    ERGNT+A+ 
Sbjct: 178 VDWSSQNVLAVGLGSCVYLWSACTSQVTRLCD-----LSPDANTVTSVSWNERGNTVAVG 232

Query: 56  T 54
           T
Sbjct: 233 T 233


>AE014298-661|AAN09125.1|  478|Drosophila melanogaster CG3000-PB,
           isoform B protein.
          Length = 478

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = -3

Query: 230 IPWSRSRV*L--MYSCTFKWRTCCLLGNLLAEDAVNILFPYLNNIVSAKPRERGNTIAIL 57
           + WS   V    + SC + W  C      L +     L P  N + S    ERGNT+A+ 
Sbjct: 178 VDWSSQNVLAVGLGSCVYLWSACTSQVTRLCD-----LSPDANTVTSVSWNERGNTVAVG 232

Query: 56  T 54
           T
Sbjct: 233 T 233


>AE014298-660|AAF45973.1|  478|Drosophila melanogaster CG3000-PA,
           isoform A protein.
          Length = 478

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = -3

Query: 230 IPWSRSRV*L--MYSCTFKWRTCCLLGNLLAEDAVNILFPYLNNIVSAKPRERGNTIAIL 57
           + WS   V    + SC + W  C      L +     L P  N + S    ERGNT+A+ 
Sbjct: 178 VDWSSQNVLAVGLGSCVYLWSACTSQVTRLCD-----LSPDANTVTSVSWNERGNTVAVG 232

Query: 56  T 54
           T
Sbjct: 233 T 233


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,870,079
Number of Sequences: 53049
Number of extensions: 873729
Number of successful extensions: 2708
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2700
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)