Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_M10
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 202 3e-52
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z81453-6|CAH04639.1| 283|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 29 4.4
L12018-2|AAK68341.1| 525|Caenorhabditis elegans G protein regul... 29 5.8
U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm recept... 28 7.7
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 202 bits (492), Expect = 3e-52
Identities = 97/203 (47%), Positives = 141/203 (69%), Gaps = 1/203 (0%)
Frame = +1
Query: 190 MPKSKRDKKVSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFLFTINNMRNTKLKDLRNDW 369
M +S+RDK VSLTK KK K ++ E+R S+ +Y+++F+FTI NMR+T+ +R +
Sbjct: 1 MARSRRDKNVSLTKVKKKTKDTKNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKY 60
Query: 370 KD-SRFFFGKNKVMAIALGKTKSDEIEEQLNLLSKKLKGQCGLLMTNRDVPDVLNWFKSY 546
K+ SRFFFGKN V++IALGK KSDE QL+ S LKGQCGL+ TN +V F
Sbjct: 61 KENSRFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEA 120
Query: 547 QASEYARAGFIATKDVLLPKGPLADFSHTIEPHLRRLGLPTSLEKGVINLIKEYQVCKKG 726
+YAR G +AT+ V+LP+GP++ F+ ++EP LR+LGLPT L+KGVI L ++++VCK+G
Sbjct: 121 SEEDYARVGDVATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEG 180
Query: 727 APLTPEXSKYIKIDRHRNGRFKV 795
PLT E +K +K + +F++
Sbjct: 181 EPLTVEQAKILKHFEVKMSQFRL 203
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 37.1 bits (82), Expect = 0.017
Identities = 32/147 (21%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Frame = +1
Query: 295 KYEHIFLFTINNMRNTKLKDLRNDWKD-SRFFFGKNKVMAIAL-GKT-KSDEIEEQLNLL 465
+Y L ++N+ + +++++R + + GKN ++ AL G K+ +E+ L +
Sbjct: 23 EYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKLLPHI 82
Query: 466 SKKLKGQCGLLMTNRDVPDVLNWFKSYQASEYARAGFIATKDVLLPKGPLADFSHTIEPH 645
+ + G + T D+ ++ + + A+AG IA DV LP
Sbjct: 83 VENV----GFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTG-MGPEKTSF 137
Query: 646 LRRLGLPTSLEKGVINLIKEYQVCKKG 726
+ L +PT + +G I ++ + + K+G
Sbjct: 138 FQALQIPTKIARGTIEILNDVHLIKEG 164
>Z81453-6|CAH04639.1| 283|Caenorhabditis elegans Hypothetical
protein B0250.10 protein.
Length = 283
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = -2
Query: 542 LLNQFSTSGTSLFVISNPH*PFNFFDNRFSCSSISSLLVLPRAI--AITLFFPKKNLESF 369
LL Q ST F+I N H F+ S ++ S+L L A+ I ++FP F
Sbjct: 67 LLTQISTD----FIIKNVH--FSLVIPAASIGNMRSVLTLLIALERVIAIYFPI----FF 116
Query: 368 QSFRRSF-NFVFLMLLMVNKNMCSYLLSEF 282
+R+ NFVFL++++ ++ Y++ F
Sbjct: 117 HIYRQKLPNFVFLLIILTSELFNQYMIFGF 146
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical
protein K12D12.1 protein.
Length = 1520
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 187 NMPKSKRDKKVSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFL 315
+M ++ D+ V T +KKG KQ IE+I S+ EHI L
Sbjct: 37 SMVMTEEDRNV-FTSIDKKGGGSKQMAIEDIYQKKSQLEHILL 78
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical
protein K12D12.1 protein.
Length = 1520
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 187 NMPKSKRDKKVSLTKTNKKGLVHKQKVIEEIRNSLSKYEHIFL 315
+M ++ D+ V T +KKG KQ IE+I S+ EHI L
Sbjct: 37 SMVMTEEDRNV-FTSIDKKGGGSKQMAIEDIYQKKSQLEHILL 78
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +1
Query: 424 KTKSDE---IEEQLNLLSKKLKGQCGLLMTNRDVP-DVLNWFKSYQASEYARAGFIATKD 591
K K +E I+ +N L +K++ + +R D +N F S+ A ++
Sbjct: 429 KRKEEEKYTIQRDINQLRRKIEQDMETMRRSRATKKDAINKFGSHMAEILMEINRSKSRF 488
Query: 592 VLLPKGPLADFSHTIEP 642
+PKGPL + I+P
Sbjct: 489 QTVPKGPLGKYITLIDP 505
>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +1
Query: 424 KTKSDE---IEEQLNLLSKKLKGQCGLLMTNRDVP-DVLNWFKSYQASEYARAGFIATKD 591
K K +E I+ +N L +K++ + +R D +N F S+ A ++
Sbjct: 429 KRKEEEKYTIQRDINQLRRKIEQDMETMRRSRATKKDAINKFGSHMAEILMEINRSKSRF 488
Query: 592 VLLPKGPLADFSHTIEP 642
+PKGPL + I+P
Sbjct: 489 QTVPKGPLGKYITLIDP 505
>L12018-2|AAK68341.1| 525|Caenorhabditis elegans G protein
regulator protein 1 protein.
Length = 525
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -3
Query: 529 SVHQAHLYLSLAIHTDLLIFLITDLVALLFH 437
+VH A+ +L TDLL F+I DL + LF+
Sbjct: 225 AVHIAYYDKALYAETDLLFFIIRDLRSALFY 255
>U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm receptor
protein 136 protein.
Length = 347
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 573 LHCNKRCFITQRSSSRFFTHY*ATFKTFGLTYISRKRCY 689
LHC F+ S +FF Y A KT L Y+ K+ +
Sbjct: 98 LHCVLTGFVASLLSCQFFYRYVALCKTHLLVYLQGKKLF 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,863,141
Number of Sequences: 27780
Number of extensions: 370700
Number of successful extensions: 1090
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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