Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_M08
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48045-5|CAD56564.1|  374|Caenorhabditis elegans Hypothetical pr...    62   5e-10
Z48045-4|CAA88102.2|  404|Caenorhabditis elegans Hypothetical pr...    62   5e-10
AC024781-2|AAK39328.2|  311|Caenorhabditis elegans Hypothetical ...    31   1.4  
U40412-1|AAA81395.1|  570|Caenorhabditis elegans Temporarily ass...    30   1.9  
Z70271-7|CAJ80829.1|  559|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z70271-6|CAA94232.1|  562|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z38112-4|CAA86232.1|  809|Caenorhabditis elegans Hypothetical pr...    28   7.5  

>Z48045-5|CAD56564.1|  374|Caenorhabditis elegans Hypothetical
           protein C41C4.7b protein.
          Length = 374

 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 24/49 (48%), Positives = 38/49 (77%)
 Frame = +1

Query: 592 VNLDTVYLRITVMHSNEINIISYIMGWIYFAAWSVSFYPQIYINFRGKA 738
           ++L+  + RITV+ S+ + I+  I+GW YF AWS+SFYPQ+Y+NF+ K+
Sbjct: 108 LDLEDAFARITVIRSHFLAILIQIVGWTYFFAWSISFYPQMYLNFKRKS 156



 Score = 33.1 bits (72), Expect = 0.27
 Identities = 17/29 (58%), Positives = 20/29 (68%)
 Frame = +3

Query: 690 VSFVLPSNIHKLQRKSVVGLNFDFLALTL 776
           +SF  P      +RKSVVGLNFDFL+L L
Sbjct: 142 ISFY-PQMYLNFKRKSVVGLNFDFLSLNL 169


>Z48045-4|CAA88102.2|  404|Caenorhabditis elegans Hypothetical
           protein C41C4.7a protein.
          Length = 404

 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 24/49 (48%), Positives = 38/49 (77%)
 Frame = +1

Query: 592 VNLDTVYLRITVMHSNEINIISYIMGWIYFAAWSVSFYPQIYINFRGKA 738
           ++L+  + RITV+ S+ + I+  I+GW YF AWS+SFYPQ+Y+NF+ K+
Sbjct: 108 LDLEDAFARITVIRSHFLAILIQIVGWTYFFAWSISFYPQMYLNFKRKS 156



 Score = 33.1 bits (72), Expect = 0.27
 Identities = 17/29 (58%), Positives = 20/29 (68%)
 Frame = +3

Query: 690 VSFVLPSNIHKLQRKSVVGLNFDFLALTL 776
           +SF  P      +RKSVVGLNFDFL+L L
Sbjct: 142 ISFY-PQMYLNFKRKSVVGLNFDFLSLNL 169


>AC024781-2|AAK39328.2|  311|Caenorhabditis elegans Hypothetical
           protein Y43H11AL.2 protein.
          Length = 311

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 9/32 (28%), Positives = 21/32 (65%)
 Frame = +1

Query: 640 EINIISYIMGWIYFAAWSVSFYPQIYINFRGK 735
           ++ ++ +I+G I  A W +  +PQ++ N++ K
Sbjct: 37  DLKLLGFIIGLISLALWLIPLFPQLWQNYKTK 68


>U40412-1|AAA81395.1|  570|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 257 protein.
          Length = 570

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +1

Query: 406 NTSLEVISNIQHPDIVQLVPPSIEIPGSNEPNKTVVISYDICAY 537
           +  ++++  +QH +I+QL   S E   SN   K   IS + C +
Sbjct: 81  DNEIDMMKKLQHENIIQLFDASAESRSSNRSVKEYKISMEYCKF 124


>Z70271-7|CAJ80829.1|  559|Caenorhabditis elegans Hypothetical
           protein W08D2.3b protein.
          Length = 559

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/39 (30%), Positives = 25/39 (64%)
 Frame = +1

Query: 247 ISSHRIRFCLVVMIILGIPSAHSQLDKMYVEVTDLNLLV 363
           I+ + +   ++V+I++ I S H+Q+++M    + LNL V
Sbjct: 442 IAFNFVAIVILVIILVSILSLHAQIERMQASQSGLNLFV 480


>Z70271-6|CAA94232.1|  562|Caenorhabditis elegans Hypothetical
           protein W08D2.3a protein.
          Length = 562

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/39 (30%), Positives = 25/39 (64%)
 Frame = +1

Query: 247 ISSHRIRFCLVVMIILGIPSAHSQLDKMYVEVTDLNLLV 363
           I+ + +   ++V+I++ I S H+Q+++M    + LNL V
Sbjct: 445 IAFNFVAIVILVIILVSILSLHAQIERMQASQSGLNLFV 483


>Z38112-4|CAA86232.1|  809|Caenorhabditis elegans Hypothetical
           protein E03A3.2 protein.
          Length = 809

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/58 (24%), Positives = 27/58 (46%)
 Frame = +3

Query: 567 VQCYTARFCQLRHSIPTYNRHALQRNKHNIVHNGLDILRGLVSFVLPSNIHKLQRKSV 740
           + C   R C +  S+PT    +L      +VH G+ ++   +  ++   I  L+RK +
Sbjct: 187 INCILKRKCDVYVSLPTGAGKSLCYQLPAVVHGGITVVISPLIALMKDQISSLKRKGI 244


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,116,868
Number of Sequences: 27780
Number of extensions: 414442
Number of successful extensions: 1022
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)