Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_M07
(1069 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.1
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 30 2.4
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 30 2.4
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 30 2.4
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 30 2.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 3.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 3.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 3.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 4.3
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 5.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.7
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = -3
Query: 1055 GGPTPXXXSPPXPXKKXSXAXXXPXPXPXXXXPPPXXPPRPXXXXXXRPRAXXXXXXXXX 876
GGP P PP S P P P PPP PP P
Sbjct: 740 GGPPPPP--PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMA 797
Query: 875 PXXPPXXXPK 846
P P PK
Sbjct: 798 PVIPDYLPPK 807
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = -3
Query: 1055 GGPTPXXXSPPXPXKKXSXAXXXPXPXPXXXXPPPXXPPRPXXXXXXRPRAXXXXXXXXX 876
GGP P PP S P P P PPP PP P
Sbjct: 740 GGPPPPP--PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMA 797
Query: 875 PXXPPXXXPK 846
P P PK
Sbjct: 798 PVIPDYLPPK 807
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = -3
Query: 1055 GGPTPXXXSPPXPXKKXSXAXXXPXPXPXXXXPPPXXPPRPXXXXXXRPRAXXXXXXXXX 876
GGP P PP S P P P PPP PP P
Sbjct: 323 GGPPPPP--PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMA 380
Query: 875 PXXPPXXXPK 846
P P PK
Sbjct: 381 PVIPDYLPPK 390
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -3
Query: 1049 PTPXXXSPPXPXKKXSXAXXXPXPXPXXXXPPPXXPP 939
P P PP P P P P PPP PP
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = -3
Query: 1055 GGPTPXXXSPPXP-XKKXSXAXXXPXPXPXXXXPPPXXPPRP 933
G P PP P + S A P P P PP PP P
Sbjct: 555 GTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -3
Query: 1049 PTPXXXSPPXPXKKXSXAXXXPXPXPXXXXPPPXXPPRP 933
P P +PP P K+ P P PP PPRP
Sbjct: 967 PVPPREAPPIP-KRNPPPLGAPPKVPEGARAPPPLPPRP 1004
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -3
Query: 1049 PTPXXXSPPXPXKKXSXAXXXPXPXPXXXXPPPXXPPRP 933
P P +PP P K+ P P PP PPRP
Sbjct: 967 PVPPREAPPIP-KRNPPPLGAPPKVPEGARAPPPLPPRP 1004
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -3
Query: 1049 PTPXXXSPPXPXKKXSXAXXXPXPXPXXXXPPPXXPPRP 933
P P +PP P K+ P P PP PPRP
Sbjct: 967 PVPPREAPPIP-KRNPPPLGAPPKVPEGARAPPPLPPRP 1004
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = -3
Query: 1049 PTPXXXSPPXPXKKXSXAXXXPXPXPXXXXPPPXXPPRP 933
P P PP P + A P P P P P P P
Sbjct: 64 PPPSYAQPPQPYAQSPIAAVPPPPPPPPPQPAPAQAPAP 102
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 3.2
Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 4/85 (4%)
Frame = -3
Query: 1058 GGGPTPXXXSPPXPXKKXSXAXXXPXPXPXXXXPPPXXPPR--PXXXXXXRPRAXXXXXX 885
G P P SPP P S P P PPP PPR P P+A
Sbjct: 270 GSPPPPPTGSPPPPPAGGSP------PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Query: 884 XXXPXXPPXXXPKXGRXXR--PXGS 816
PP K R P GS
Sbjct: 324 AGTGSPPPPPRQKRQAPERSPPTGS 348
Score = 28.3 bits (60), Expect = 9.9
Identities = 29/104 (27%), Positives = 29/104 (27%), Gaps = 6/104 (5%)
Frame = -3
Query: 1043 PXXXSPPXPXKKXSX---AXXXPXPXPXXXXPPP---XXPPRPXXXXXXRPRAXXXXXXX 882
P PP P K S P P P PPP PP P P A
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 881 XXPXXPPXXXPKXGRXXRPXGSXXXXXXXMXXSPXXXXXGGXPP 750
PP P R P GS SP G PP
Sbjct: 293 RAGSPPPPPPP---RGSPPTGS--LPPPQAGGSPPPAGTGSPPP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 3.2
Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 4/85 (4%)
Frame = -3
Query: 1058 GGGPTPXXXSPPXPXKKXSXAXXXPXPXPXXXXPPPXXPPR--PXXXXXXRPRAXXXXXX 885
G P P SPP P S P P PPP PPR P P+A
Sbjct: 291 GSPPPPPTGSPPPPPAGGSP------PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Query: 884 XXXPXXPPXXXPKXGRXXR--PXGS 816
PP K R P GS
Sbjct: 345 AGTGSPPPPPRQKRQAPERSPPTGS 369
Score = 28.3 bits (60), Expect = 9.9
Identities = 29/104 (27%), Positives = 29/104 (27%), Gaps = 6/104 (5%)
Frame = -3
Query: 1043 PXXXSPPXPXKKXSX---AXXXPXPXPXXXXPPP---XXPPRPXXXXXXRPRAXXXXXXX 882
P PP P K S P P P PPP PP P P A
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 881 XXPXXPPXXXPKXGRXXRPXGSXXXXXXXMXXSPXXXXXGGXPP 750
PP P R P GS SP G PP
Sbjct: 314 RAGSPPPPPPP---RGSPPTGS--LPPPQAGGSPPPAGTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 3.2
Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 4/85 (4%)
Frame = -3
Query: 1058 GGGPTPXXXSPPXPXKKXSXAXXXPXPXPXXXXPPPXXPPR--PXXXXXXRPRAXXXXXX 885
G P P SPP P S P P PPP PPR P P+A
Sbjct: 276 GSPPPPPTGSPPPPPAGGSP------PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Query: 884 XXXPXXPPXXXPKXGRXXR--PXGS 816
PP K R P GS
Sbjct: 330 AGTGSPPPPPRQKRQAPERSPPTGS 354
Score = 28.3 bits (60), Expect = 9.9
Identities = 29/104 (27%), Positives = 29/104 (27%), Gaps = 6/104 (5%)
Frame = -3
Query: 1043 PXXXSPPXPXKKXSX---AXXXPXPXPXXXXPPP---XXPPRPXXXXXXRPRAXXXXXXX 882
P PP P K S P P P PPP PP P P A
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 881 XXPXXPPXXXPKXGRXXRPXGSXXXXXXXMXXSPXXXXXGGXPP 750
PP P R P GS SP G PP
Sbjct: 299 RAGSPPPPPPP---RGSPPTGS--LPPPQAGGSPPPAGTGSPPP 337
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 4.3
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Frame = -3
Query: 1028 PPXPXKKXSXAXXXPXPXPXXXX--PPPXXPP--RPXXXXXXRPRAXXXXXXXXXPXXPP 861
PP P K + P P P PPP PP RP R P PP
Sbjct: 125 PPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPP 184
Query: 860 XXXP 849
P
Sbjct: 185 RTPP 188
Score = 28.7 bits (61), Expect = 7.5
Identities = 19/63 (30%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = -3
Query: 1028 PPXPXKKXSXAXXXPXPXPXXXXPPPXXP--PRPXXXXXXRPRAXXXXXXXXXPXXPPXX 855
PP P + S A P P PPP P P P RP P PP
Sbjct: 123 PPPPPPRKSRAGGSSPPPP----PPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSP 178
Query: 854 XPK 846
P+
Sbjct: 179 EPR 181
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.5 bits (63), Expect = 4.3
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = +1
Query: 850 GXXXGGXXGXXXXXXQXXARGRXXXXXXGRGGXXGGGXKXXGXGXGXXXAXXXFXXGXGG 1029
G G G RG G GG GGG G G G G GG
Sbjct: 82 GGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDG-GWGGNNGGGGGGRGGGG 140
Query: 1030 EXX*GVGPP 1056
G GPP
Sbjct: 141 RGGDGRGPP 149
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical protein
Y49E10.10 protein.
Length = 425
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = -3
Query: 1049 PTPXXXSPPXPXKKXSXAXXXPXPXPXXXXPPPXXPPRP 933
P P +PP P P P P P PP P
Sbjct: 200 PPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPNPPAP 238
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 5.7
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = -3
Query: 1049 PTPXXXSPPXPXKKXSXAXXXPXPXPXXXXPPPXXPPRP 933
P P PP P P P PPP PP P
Sbjct: 34 PPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,725,831
Number of Sequences: 27780
Number of extensions: 90727
Number of successful extensions: 639
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2856190974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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