Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_M06
         (879 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   4.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   4.2  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   4.2  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   7.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   7.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   7.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   7.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   7.3  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 316 LIDFSRGGNRVKSPGN 363
           L+DF + GNR+  P N
Sbjct: 703 LLDFLKSGNRLARPAN 718


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 549 VTNSEEYLAGKDEKIKLQEVGPYVYREALEHKVQSFNSN 665
           VT +   +    ++++L+   P   R  LEH   +FN+N
Sbjct: 99  VTLASRAVTFNHQQLELETDTPEPARTLLEHSFVAFNTN 137


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 689 ASSDLGGRDVRGPQRGR 739
           ++   GGRD+RG   GR
Sbjct: 548 SADQFGGRDIRGDDFGR 564


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +3

Query: 162 RYSADKEMKDLTNNRLKRIEIEKSNIECDFSECEGLNNFEDID 290
           R   +K  +DL++     + IE    + DFSE      FE+++
Sbjct: 91  RREVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRAKFEELN 133


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 303 KDAIINRLFERRKQGQVARQPKCLFILLMLGF 398
           K  +I  L +++K     R  +C+++  +LGF
Sbjct: 104 KTKMIAHLKDKKKIRAKKRWSQCMYMYFLLGF 135


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 303 KDAIINRLFERRKQGQVARQPKCLFILLMLGF 398
           K  +I  L +++K     R  +C+++  +LGF
Sbjct: 418 KTKMIAHLKDKKKIRAKKRWSQCMYMYFLLGF 449


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 303 KDAIINRLFERRKQGQVARQPKCLFILLMLGF 398
           K  +I  L +++K     R  +C+++  +LGF
Sbjct: 651 KTKMIAHLKDKKKIRAKKRWSQCMYMYFLLGF 682


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 303 KDAIINRLFERRKQGQVARQPKCLFILLMLGF 398
           K  +I  L +++K     R  +C+++  +LGF
Sbjct: 651 KTKMIAHLKDKKKIRAKKRWSQCMYMYFLLGF 682


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 488  FAPILQKDFLIKQKVVWLHEQY 423
            F PI        +K+VWLH  Y
Sbjct: 976  FFPIDYTSAFSSEKIVWLHLVY 997


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,302
Number of Sequences: 336
Number of extensions: 4171
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)