Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_M06
         (879 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    26   0.40 
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    26   0.40 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    25   0.70 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    25   0.70 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   3.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   3.7  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -2

Query: 734 LSVALGHLFHPSQRMQGNRRQRTVRVEALNFVFQSLSVHVRP 609
           L V L  L HPS+  QG    R    E L+ +       +RP
Sbjct: 8   LLVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRP 49


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -2

Query: 734 LSVALGHLFHPSQRMQGNRRQRTVRVEALNFVFQSLSVHVRP 609
           L V L  L HPS+  QG    R    E L+ +       +RP
Sbjct: 8   LLVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRP 49


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 498 MWRKPEVQLYTRVFLFNVTNSE 563
           +WR P +Q  T  +LFN+  S+
Sbjct: 58  IWRNPSMQTPTNYYLFNLAVSD 79


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 264 PRTPKNRIRCSISQSQF-FSIDYSSGPSFPCPPNTFD 157
           PR+P++  RCS+ + +   S+ Y S  +     NT +
Sbjct: 323 PRSPESNSRCSVKREKIKISVSYPSTETLNTKCNTLE 359


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 438 PYNFLFNQKVLLQDGGEIFEMWRKP 512
           P + L+N+ V+ +DG E F+   +P
Sbjct: 571 PSDVLYNRLVVSEDGSETFKYSSQP 595


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 438 PYNFLFNQKVLLQDGGEIFEMWRKP 512
           P + L+N+ V+ +DG E F+   +P
Sbjct: 571 PSDVLYNRLVVSEDGSETFKYSSQP 595


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 177 KEMKDLTNNRLKRIEIEKSNIECD 248
           K + D+   R  RI+  KSN++CD
Sbjct: 128 KSLDDVKILRNDRIDSYKSNLKCD 151


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 556 ILKSTWLGRMRKLSSRKSGLTCTE-RLWNTK 645
           I+K+ WL +    SS   G+T  E   W+T+
Sbjct: 589 IMKTYWLEKREHRSSSTKGITIQEPPQWHTR 619


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,854
Number of Sequences: 438
Number of extensions: 5151
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)