Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_M03
         (895 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   1.3  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   4.1  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   5.4  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   5.4  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            24   7.2  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 19/87 (21%), Positives = 42/87 (48%)
 Frame = +1

Query: 205 RFIMNNARVAYLWDEKLVKECIRLPAVFGRARLVHNLIEAYGLISKLKVIRSSPASYEDL 384
           RF  +  RV Y++ +   +E ++  A     R+++  +    +  + +++  SP+  + L
Sbjct: 266 RFSAHGLRVDYVFGKSKPEETVKPEAQDSLFRMLNGFLLT--VTCRGQIVLVSPSVEQFL 323

Query: 385 NVFHSDLYLEHLKQITDIDDDYISNAQ 465
               +DLY ++L  +T  DD  +   Q
Sbjct: 324 GHCQTDLYGQNLFTLTHPDDHALLKQQ 350


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 863 YPSPSPQPMSSILPVPG*KPGSN 795
           +P+P  +    +LP PG  PGSN
Sbjct: 532 FPAPWKRQRLVLLPKPGKPPGSN 554


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = +1

Query: 487 YDCPPVPN---MFEL-VSTIAGGSVTAAKCLTMGIADIAIN 597
           YD  P P+   +FE  VST+A  S TA  C T+   DI  N
Sbjct: 67  YDDQPEPSDEPVFEKNVSTVATCSRTAPFCYTLWTFDIVKN 107


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 478  GIGYDCPPVPNMFELVSTIAGGSVTAA 558
            GI Y+C      F+ +S ++GG  T A
Sbjct: 1110 GINYNCVAPGKRFQPMSNLSGGEKTIA 1136


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -1

Query: 529 LTPARTY*GQGDNHILSQNFHLEH*KCNHHQCLLFVLNVL 410
           +TP  +    GD+   S N    +   + H+C +F+ N L
Sbjct: 94  VTPTSSIASSGDDTNSSNNLTTSNGTEDRHECFVFISNKL 133


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 918,565
Number of Sequences: 2352
Number of extensions: 21183
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)