Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_M03
(895 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81486-2|CAB03984.1| 461|Caenorhabditis elegans Hypothetical pr... 195 3e-50
Z81108-7|CAB03240.1| 465|Caenorhabditis elegans Hypothetical pr... 187 8e-48
Z81106-4|CAB03224.1| 465|Caenorhabditis elegans Hypothetical pr... 187 8e-48
Z46676-2|CAA86662.1| 507|Caenorhabditis elegans Hypothetical pr... 157 8e-39
AF026202-1|AAZ82858.1| 755|Caenorhabditis elegans Histone deace... 83 3e-16
U61954-3|AAK29809.1| 863|Caenorhabditis elegans Hypothetical pr... 78 7e-15
U61954-2|ABS19469.1| 957|Caenorhabditis elegans Hypothetical pr... 78 7e-15
U61954-1|AAK29810.1| 955|Caenorhabditis elegans Hypothetical pr... 78 7e-15
Z71185-9|CAA94910.2| 282|Caenorhabditis elegans Hypothetical pr... 58 8e-09
AL032644-5|CAA21669.2| 517|Caenorhabditis elegans Hypothetical ... 51 1e-06
Z50070-11|CAD45593.1| 506|Caenorhabditis elegans Hypothetical p... 48 9e-06
Z50070-10|CAD45592.1| 508|Caenorhabditis elegans Hypothetical p... 48 9e-06
AL032663-6|CAA21766.2| 349|Caenorhabditis elegans Hypothetical ... 33 0.28
U41106-2|AAA82410.1| 797|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z81567-4|CAB04584.1| 311|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z92834-12|CAB07392.5| 424|Caenorhabditis elegans Hypothetical p... 28 7.8
Z81569-2|CAB04602.4| 424|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z81486-2|CAB03984.1| 461|Caenorhabditis elegans Hypothetical
protein C53A5.3 protein.
Length = 461
Score = 195 bits (476), Expect = 3e-50
Identities = 100/221 (45%), Positives = 132/221 (59%), Gaps = 2/221 (0%)
Frame = +1
Query: 226 RVAYLWDEKLVKECIRLPAVFG--RARLVHNLIEAYGLISKLKVIRSSPASYEDLNVFHS 399
RVAY +D + V R R+ H+L+ YGL L++ R PAS+ED+ FHS
Sbjct: 14 RVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPASFEDMTRFHS 73
Query: 400 DLYLEHLKQITDIDDDYISNAQDENFGIGYDCPPVPNMFELVSTIAGGSVTAAKCLTMGI 579
D Y+ LK D+ N Q F +G DCP ++E +GGS+ AA L
Sbjct: 74 DEYMTFLKSANP-DNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQK 132
Query: 580 ADIAINWCGGWHHAHNNRAEGFCYVNDIVIAIEKLKGKFKNILYVDLDVHHGNGVQDAYW 759
DIAINW GG HHA + A GFCY NDIV+ I +L K +LYVD+DVHHG+GV++A++
Sbjct: 133 VDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAFY 192
Query: 760 TTRSVYTLSFHKFEPGFYPGTGSIEDIGCGDGEGYSCNFPL 882
TT V T+SFHK+ F+PGTG ++DIG G G+ YS N PL
Sbjct: 193 TTDRVMTVSFHKY-GDFFPGTGDLKDIGAGKGKLYSVNVPL 232
>Z81108-7|CAB03240.1| 465|Caenorhabditis elegans Hypothetical
protein R06C1.1 protein.
Length = 465
Score = 187 bits (456), Expect = 8e-48
Identities = 88/197 (44%), Positives = 124/197 (62%)
Frame = +1
Query: 292 RARLVHNLIEAYGLISKLKVIRSSPASYEDLNVFHSDLYLEHLKQITDIDDDYISNAQDE 471
R R+ H+LI YGL KL V+R + AS+ ++ +HSD Y+ L+ + D+ Q
Sbjct: 33 RVRMTHSLIVNYGLYRKLNVMRPARASFSEITRYHSDDYINFLRNVKS-DNMSTFTDQMA 91
Query: 472 NFGIGYDCPPVPNMFELVSTIAGGSVTAAKCLTMGIADIAINWCGGWHHAHNNRAEGFCY 651
F +G DCP M+E GGS+ AA L ++IAINW GG HHA + A GFCY
Sbjct: 92 RFSVGEDCPVFDGMYEFCQLSCGGSLAAAARLNRQESEIAINWMGGLHHAKKSEASGFCY 151
Query: 652 VNDIVIAIEKLKGKFKNILYVDLDVHHGNGVQDAYWTTRSVYTLSFHKFEPGFYPGTGSI 831
NDIV+AI +L K +LY+D+DVHHG+GV++A++TT V T+SFHK ++PGTG +
Sbjct: 152 SNDIVLAILELLKHHKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHK-HGEYFPGTGDL 210
Query: 832 EDIGCGDGEGYSCNFPL 882
+D+G G G+ Y+ N PL
Sbjct: 211 KDVGAGSGKYYALNVPL 227
>Z81106-4|CAB03224.1| 465|Caenorhabditis elegans Hypothetical
protein R06C1.1 protein.
Length = 465
Score = 187 bits (456), Expect = 8e-48
Identities = 88/197 (44%), Positives = 124/197 (62%)
Frame = +1
Query: 292 RARLVHNLIEAYGLISKLKVIRSSPASYEDLNVFHSDLYLEHLKQITDIDDDYISNAQDE 471
R R+ H+LI YGL KL V+R + AS+ ++ +HSD Y+ L+ + D+ Q
Sbjct: 33 RVRMTHSLIVNYGLYRKLNVMRPARASFSEITRYHSDDYINFLRNVKS-DNMSTFTDQMA 91
Query: 472 NFGIGYDCPPVPNMFELVSTIAGGSVTAAKCLTMGIADIAINWCGGWHHAHNNRAEGFCY 651
F +G DCP M+E GGS+ AA L ++IAINW GG HHA + A GFCY
Sbjct: 92 RFSVGEDCPVFDGMYEFCQLSCGGSLAAAARLNRQESEIAINWMGGLHHAKKSEASGFCY 151
Query: 652 VNDIVIAIEKLKGKFKNILYVDLDVHHGNGVQDAYWTTRSVYTLSFHKFEPGFYPGTGSI 831
NDIV+AI +L K +LY+D+DVHHG+GV++A++TT V T+SFHK ++PGTG +
Sbjct: 152 SNDIVLAILELLKHHKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHK-HGEYFPGTGDL 210
Query: 832 EDIGCGDGEGYSCNFPL 882
+D+G G G+ Y+ N PL
Sbjct: 211 KDVGAGSGKYYALNVPL 227
>Z46676-2|CAA86662.1| 507|Caenorhabditis elegans Hypothetical
protein C08B11.2 protein.
Length = 507
Score = 157 bits (382), Expect = 8e-39
Identities = 77/197 (39%), Positives = 119/197 (60%)
Frame = +1
Query: 292 RARLVHNLIEAYGLISKLKVIRSSPASYEDLNVFHSDLYLEHLKQITDIDDDYISNAQDE 471
R + ++L+ +Y + + V+ S D++VFH++ Y+ L+ +T + +
Sbjct: 54 RLVVCNDLVVSYEMPKYMTVVESPKLDAADISVFHTEDYVNFLQTVTPKLGLTMPDDVLR 113
Query: 472 NFGIGYDCPPVPNMFELVSTIAGGSVTAAKCLTMGIADIAINWCGGWHHAHNNRAEGFCY 651
F IG DCP +++ + AGGSV A+ L + DI INW GG HHA + A GFCY
Sbjct: 114 QFNIGEDCPIFAGLWDYCTLYAGGSVEGARRLNHKMNDIVINWPGGLHHAKKSEASGFCY 173
Query: 652 VNDIVIAIEKLKGKFKNILYVDLDVHHGNGVQDAYWTTRSVYTLSFHKFEPGFYPGTGSI 831
VNDIV+ I +L K +LY+D+D+HHG+GVQ+A+ + V T+SFH+F ++PG+GSI
Sbjct: 174 VNDIVLGILELLKYHKRVLYIDIDIHHGDGVQEAFNNSDRVMTVSFHRFGQ-YFPGSGSI 232
Query: 832 EDIGCGDGEGYSCNFPL 882
D G G G+ ++ N PL
Sbjct: 233 MDKGVGPGKYFAINVPL 249
>AF026202-1|AAZ82858.1| 755|Caenorhabditis elegans Histone
deacetylase protein 4 protein.
Length = 755
Score = 83.0 bits (196), Expect = 3e-16
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
Frame = +1
Query: 613 HHAHNNRAEGFCYVNDIVIAIEKLKGKF----KNILYVDLDVHHGNGVQDAYWTTRSVYT 780
HHA + +A GFC+ N++ +A++ L+ K+ I +D DVHHGNG Q ++ +V
Sbjct: 493 HHAEHEQAMGFCFFNNVAVAVKVLQTKYPAQCAKIAIIDWDVHHGNGTQLSFENDPNVLY 552
Query: 781 LSFHKFEPG-FYPGTGSIEDIGCGDGEGYSCNFPLN 885
+S H+ + G F+PGTGS+ ++G D +G + N P +
Sbjct: 553 MSLHRHDKGNFFPGTGSVTEVGKNDAKGLTVNVPFS 588
>U61954-3|AAK29809.1| 863|Caenorhabditis elegans Hypothetical protein
F41H10.6a protein.
Length = 863
Score = 78.2 bits (184), Expect = 7e-15
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
Frame = +1
Query: 367 ASYEDLNVFHSDLYLEHLKQITDIDDDYISNAQDENFGIGYDCPPVPNMFELVSTIAGGS 546
A+ E++ + H+ LEHL+ + D+ + ++ F Y + S
Sbjct: 478 ATNEEIRLVHTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQS 537
Query: 547 VTAAKCLTMGIADIAINWCGGWHHAHNNRAEGFCYVNDIVIAIE--KLKGKFKNILYVDL 720
V G + + HHA +++ GFC N++ +A + + + K K +L +D
Sbjct: 538 VDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDW 597
Query: 721 DVHHGNGVQDAYWTTRSVYTLSFHKFEPG-FYP--GTGSIEDIGCGDGEGYSCNFPLN 885
DVHHGNG Q+ ++ +V +S H+ + G FYP D+G G GEG S N P +
Sbjct: 598 DVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFS 655
Score = 67.7 bits (158), Expect = 1e-11
Identities = 57/195 (29%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Frame = +1
Query: 334 ISKLKVIRSSPASYEDLNVFHSDLYLEHLKQITDIDDDYISNAQDENFGIGYDCPPVPNM 513
++K K++ L + +DL + H K + D + + + I C ++
Sbjct: 48 LTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVK---DLMESEKKTQEDINSQCEKYDSV 104
Query: 514 F--ELVSTIAGGSVTAAKCLTMGI-ADIAINWCG----GWHHAHNNRAEGFCYVNDIVIA 672
F E +A V + LT I A+ A N HHA + GFC N++ A
Sbjct: 105 FMTENSMKVAKDGVACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQA 164
Query: 673 IEK-LKGKFKNILYVDLDVHHGNGVQDAYWTTRSVYTLSFHKFEPG-FYP--GTGSIEDI 840
E+ + IL VDLDVHHG+G Q ++ + V S H+ E G F+P + I
Sbjct: 165 AEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHI 224
Query: 841 GCGDGEGYSCNFPLN 885
G G G GY+ N LN
Sbjct: 225 GSGKGLGYNANLALN 239
>U61954-2|ABS19469.1| 957|Caenorhabditis elegans Hypothetical protein
F41H10.6c protein.
Length = 957
Score = 78.2 bits (184), Expect = 7e-15
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
Frame = +1
Query: 367 ASYEDLNVFHSDLYLEHLKQITDIDDDYISNAQDENFGIGYDCPPVPNMFELVSTIAGGS 546
A+ E++ + H+ LEHL+ + D+ + ++ F Y + S
Sbjct: 480 ATNEEIRLVHTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQS 539
Query: 547 VTAAKCLTMGIADIAINWCGGWHHAHNNRAEGFCYVNDIVIAIE--KLKGKFKNILYVDL 720
V G + + HHA +++ GFC N++ +A + + + K K +L +D
Sbjct: 540 VDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDW 599
Query: 721 DVHHGNGVQDAYWTTRSVYTLSFHKFEPG-FYP--GTGSIEDIGCGDGEGYSCNFPLN 885
DVHHGNG Q+ ++ +V +S H+ + G FYP D+G G GEG S N P +
Sbjct: 600 DVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFS 657
Score = 65.7 bits (153), Expect = 4e-11
Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Frame = +1
Query: 613 HHAHNNRAEGFCYVNDIVIAIEK-LKGKFKNILYVDLDVHHGNGVQDAYWTTRSVYTLSF 789
HHA + GFC N++ A E+ + IL VDLDVHHG+G Q ++ + V S
Sbjct: 147 HHADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSI 206
Query: 790 HKFEPG-FYP--GTGSIEDIGCGDGEGYSCNFPLN 885
H+ E G F+P + IG G G GY+ N LN
Sbjct: 207 HRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALN 241
>U61954-1|AAK29810.1| 955|Caenorhabditis elegans Hypothetical protein
F41H10.6b protein.
Length = 955
Score = 78.2 bits (184), Expect = 7e-15
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
Frame = +1
Query: 367 ASYEDLNVFHSDLYLEHLKQITDIDDDYISNAQDENFGIGYDCPPVPNMFELVSTIAGGS 546
A+ E++ + H+ LEHL+ + D+ + ++ F Y + S
Sbjct: 478 ATNEEIRLVHTKKMLEHLRTTETMKDEELMEEAEKEFNSIYLTRDTLKVARKAVGAVLQS 537
Query: 547 VTAAKCLTMGIADIAINWCGGWHHAHNNRAEGFCYVNDIVIAIE--KLKGKFKNILYVDL 720
V G + + HHA +++ GFC N++ +A + + + K K +L +D
Sbjct: 538 VDEIFEKDAGQRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDW 597
Query: 721 DVHHGNGVQDAYWTTRSVYTLSFHKFEPG-FYP--GTGSIEDIGCGDGEGYSCNFPLN 885
DVHHGNG Q+ ++ +V +S H+ + G FYP D+G G GEG S N P +
Sbjct: 598 DVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPIGEPKDYSDVGEGAGEGMSVNVPFS 655
Score = 67.7 bits (158), Expect = 1e-11
Identities = 57/195 (29%), Positives = 86/195 (44%), Gaps = 11/195 (5%)
Frame = +1
Query: 334 ISKLKVIRSSPASYEDLNVFHSDLYLEHLKQITDIDDDYISNAQDENFGIGYDCPPVPNM 513
++K K++ L + +DL + H K + D + + + I C ++
Sbjct: 48 LTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVK---DLMESEKKTQEDINSQCEKYDSV 104
Query: 514 F--ELVSTIAGGSVTAAKCLTMGI-ADIAINWCG----GWHHAHNNRAEGFCYVNDIVIA 672
F E +A V + LT I A+ A N HHA + GFC N++ A
Sbjct: 105 FMTENSMKVAKDGVACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCLFNNVAQA 164
Query: 673 IEK-LKGKFKNILYVDLDVHHGNGVQDAYWTTRSVYTLSFHKFEPG-FYP--GTGSIEDI 840
E+ + IL VDLDVHHG+G Q ++ + V S H+ E G F+P + I
Sbjct: 165 AEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHLPESDFDHI 224
Query: 841 GCGDGEGYSCNFPLN 885
G G G GY+ N LN
Sbjct: 225 GSGKGLGYNANLALN 239
>Z71185-9|CAA94910.2| 282|Caenorhabditis elegans Hypothetical
protein C35A5.9 protein.
Length = 282
Score = 58.0 bits (134), Expect = 8e-09
Identities = 40/97 (41%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = +1
Query: 535 AGGSVTAAK-CLTMGIADIAINWCGGWHHAHNNRAEGFCYVNDIVIAIEKL--KGKFKNI 705
AGG+V AA L G A IN GG+HHA ++ GFC+ DI +AI L K N
Sbjct: 67 AGGTVLAANLALKHGWA---INVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANA 123
Query: 706 LYVDLDVHHGNGVQDAYWTTRSVYTLSFHKFEPGFYP 816
+ VDLD H GNG + +V+ F F P YP
Sbjct: 124 IVVDLDAHQGNGHARDFADNPNVFV--FDVFNPYVYP 158
>AL032644-5|CAA21669.2| 517|Caenorhabditis elegans Hypothetical
protein Y51H1A.5 protein.
Length = 517
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +1
Query: 613 HHAHNNRAEGFCYVNDIVIAIEKLKGKFKNILYVDLDVHHGNGVQDA--YWTTRSVYTLS 786
HHA + GFC N++ IA + + +L VD DVH GNG Q+ +V +S
Sbjct: 137 HHAMPDEGCGFCIFNNVAIAAKAAIQNGQKVLIVDYDVHAGNGTQECVEQMGEGNVQLIS 196
Query: 787 FHKFEPG-FYPGTGSIEDIGCGDGEGYSCNFPLNXL 891
H++E G F+P ++ G + N PLN +
Sbjct: 197 IHRYENGHFWP---NMPQTGIYHNYKNTINLPLNTI 229
>Z50070-11|CAD45593.1| 506|Caenorhabditis elegans Hypothetical
protein F43G6.11b protein.
Length = 506
Score = 48.0 bits (109), Expect = 9e-06
Identities = 46/213 (21%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Frame = +1
Query: 214 MNNARVAYLWDEKLVKECIRLPAVFG----RARLVHNLIEAYGLISKLKVIRSSPASYED 381
M++ Y++DE+++ + + R +L++ ++ L+ I + A+ +
Sbjct: 1 MSSKPFGYVYDERMLGHECKYDSTMAECPKRMKLIYERLQKDKLLDGAVKIDAREANDSE 60
Query: 382 LNVFHSDLYLEHLKQITDID--DDYISNAQDENFGIGYDCPPVPNMFELVSTIAGGSVTA 555
+ + H ++ + + + ++Y + + I + C N E GGS+
Sbjct: 61 IRLNHPQQLIDEIVSLNSTEKCEEYCKDKE-----ILWTCE---NTNEAARVAIGGSIEL 112
Query: 556 AKCLTMGIADIAINWCGG-WHHAHNNRAEGFCYVNDIVIA----IEKLKGKFKNILYVDL 720
K G HH++ A+G+C N++ IA IEKL+ K + VD
Sbjct: 113 VKAAMEGKIHNGFAMVRPPGHHSYGKVAQGYCIFNNVAIAAKYAIEKLE--VKKVAIVDF 170
Query: 721 DVHHGNGVQDAYWTTRSVYTLSFHKFEPG-FYP 816
D H GNG + ++ SFH G F+P
Sbjct: 171 DYHAGNGTYQSVKDESRIHLTSFHGHHFGAFWP 203
>Z50070-10|CAD45592.1| 508|Caenorhabditis elegans Hypothetical
protein F43G6.11a protein.
Length = 508
Score = 48.0 bits (109), Expect = 9e-06
Identities = 46/213 (21%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Frame = +1
Query: 214 MNNARVAYLWDEKLVKECIRLPAVFG----RARLVHNLIEAYGLISKLKVIRSSPASYED 381
M++ Y++DE+++ + + R +L++ ++ L+ I + A+ +
Sbjct: 1 MSSKPFGYVYDERMLGHECKYDSTMAECPKRMKLIYERLQKDKLLDGAVKIDAREANDSE 60
Query: 382 LNVFHSDLYLEHLKQITDID--DDYISNAQDENFGIGYDCPPVPNMFELVSTIAGGSVTA 555
+ + H ++ + + + ++Y + + I + C N E GGS+
Sbjct: 61 IRLNHPQQLIDEIVSLNSTEKCEEYCKDKE-----ILWTCE---NTNEAARVAIGGSIEL 112
Query: 556 AKCLTMGIADIAINWCGG-WHHAHNNRAEGFCYVNDIVIA----IEKLKGKFKNILYVDL 720
K G HH++ A+G+C N++ IA IEKL+ K + VD
Sbjct: 113 VKAAMEGKIHNGFAMVRPPGHHSYGKVAQGYCIFNNVAIAAKYAIEKLE--VKKVAIVDF 170
Query: 721 DVHHGNGVQDAYWTTRSVYTLSFHKFEPG-FYP 816
D H GNG + ++ SFH G F+P
Sbjct: 171 DYHAGNGTYQSVKDESRIHLTSFHGHHFGAFWP 203
>AL032663-6|CAA21766.2| 349|Caenorhabditis elegans Hypothetical
protein Y75B12B.7 protein.
Length = 349
Score = 33.1 bits (72), Expect = 0.28
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Frame = +1
Query: 295 ARLVHNLIEAYGLISKL--------KVIRSSPASYEDLNVFHSDLYLEHLKQITDIDDDY 450
ARLV+ +I GL+S + K +RSSP + DL L+ L Q T D Y
Sbjct: 18 ARLVNTVISFLGLLSNIFHFSILIRKSLRSSPVFSMMFVICICDL-LQLLTQ-TQNDIKY 75
Query: 451 ISNAQDENFGIGYDCPPVPNMFELVSTIAGGSVTAAKCLTMGIA 582
I +F +G+D + + T+ G S+ + CL + +A
Sbjct: 76 ILEFNQPDFCLGFDTYYATALTLTMETLGGFSMLVSSCLVILVA 119
>U41106-2|AAA82410.1| 797|Caenorhabditis elegans Hypothetical
protein W06A11.2 protein.
Length = 797
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +1
Query: 307 HNLIEAYG---LISKLKVIRSSP-ASYEDLNVFHSDLYLEHLKQITDIDDD 447
HNL+E YG L+ LK + + +YE L +FH DL+ +K++ + +D
Sbjct: 620 HNLVEHYGHRILLVDLKDFQLTRFQNYEMLKIFHDDLFFSDIKKMPNRWED 670
>Z81567-4|CAB04584.1| 311|Caenorhabditis elegans Hypothetical
protein K08C9.5 protein.
Length = 311
Score = 29.9 bits (64), Expect = 2.6
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 205 RFIMNNARVAYLWDEKLVKECIRLPAVFGRARLVHNLIEAYGL-ISKLKVIRSSPASYED 381
+F + RV + E L E +RL + + V+ L+E L ISK V++S+P++ ED
Sbjct: 137 KFDVGTLRVLF---ENLKVENLRLGYLIPPSH-VNLLLEPQNLKISKKLVLKSTPSTPED 192
Query: 382 LNVFHSDLYLEH 417
L+ +L +EH
Sbjct: 193 LSFGMEELQIEH 204
>Z92834-12|CAB07392.5| 424|Caenorhabditis elegans Hypothetical
protein K11B4.1 protein.
Length = 424
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 343 LKVIRSSPASYEDLNVFHSDLYLEHLKQITDIDDDYISNAQDENFG 480
+K I S E+ SD+ LEHLK+I ++D + Q + FG
Sbjct: 305 VKNILESIGEVEEAKEKLSDIILEHLKKIQVSEEDSLCAVQTKLFG 350
>Z81569-2|CAB04602.4| 424|Caenorhabditis elegans Hypothetical
protein K11B4.1 protein.
Length = 424
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 343 LKVIRSSPASYEDLNVFHSDLYLEHLKQITDIDDDYISNAQDENFG 480
+K I S E+ SD+ LEHLK+I ++D + Q + FG
Sbjct: 305 VKNILESIGEVEEAKEKLSDIILEHLKKIQVSEEDSLCAVQTKLFG 350
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,903,354
Number of Sequences: 27780
Number of extensions: 454492
Number of successful extensions: 1359
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -