Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_L20
         (862 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0189 - 6253659-6255380                                           33   0.39 
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331...    33   0.39 
02_05_0101 - 25824093-25824112,25824734-25824842,25824927-258264...    29   4.8  

>03_02_0189 - 6253659-6255380
          Length = 573

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -2

Query: 258 IHCLHNELIALLFINTMDISEHVKPAEAQGFRFTQTHGELNLNSRPS-LKPHKTG 97
           IH L  + +     NT  + + V   EA+G + T+ HG+L   +R + LK  K G
Sbjct: 426 IHALEAQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDG 480


>02_05_0064 - 25529630-25531440,25531663-25531673,25533113-25533198,
            25533412-25534259,25535385-25535736
          Length = 1035

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -2

Query: 258  IHCLHNELIALLFINTMDISEHVKPAEAQGFRFTQTHGELNLNSRPS-LKPHKTG 97
            IH L  + +     NT  + + V   EA+G + T+ HG+L   +R + LK  K G
Sbjct: 888  IHALEAQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDG 942


>02_05_0101 - 25824093-25824112,25824734-25824842,25824927-25826429,
            25826596-25827333,25827712-25827919,25828455-25830409,
            25830868-25830960,25831044-25831100,25831189-25831272,
            25831345-25831437,25831622-25832053,25833593-25833933,
            25834663-25835215
          Length = 2061

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = +3

Query: 222  TEELLIRCVNNVLTCFKAKI 281
            T+E+++ C+ NV +C+KA +
Sbjct: 1559 TDEIILNCITNVTSCYKAPL 1578


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,404,007
Number of Sequences: 37544
Number of extensions: 233868
Number of successful extensions: 405
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)