Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_L18
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0154 - 1775693-1775942,1776834-1777588                           30   2.9  
07_03_1483 + 26881032-26882035,26882130-26882204,26882324-268828...    29   3.9  
07_03_0697 + 20759176-20759817,20760592-20760708,20761422-207616...    29   6.7  
07_03_0361 + 17215312-17216217                                         29   6.7  

>04_01_0154 - 1775693-1775942,1776834-1777588
          Length = 334

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = -2

Query: 859 APRFPRREK-GGQVXRQ*AAGSEQESARGSXQGGTPGIFIVLSGFATXDLSVDFCDARPG 683
           APR P RE+ GG   R+ AA S +   RG   GG P       G     L +    AR  
Sbjct: 73  APRRPDRERGGGGAARRRAASSSRRRRRGKSVGG-PSSRRRRRGKTAGGLKLPTTAARQD 131

Query: 682 GRSLWKNAS 656
           G +  +N+S
Sbjct: 132 GGATRRNSS 140


>07_03_1483 +
           26881032-26882035,26882130-26882204,26882324-26882861,
           26883999-26884895,26885178-26885327,26885459-26885791,
           26886501-26886695,26887805-26887918
          Length = 1101

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 137 SSNALGLGIIICHPGCXL 84
           +SN++G G IICH GC L
Sbjct: 341 NSNSIGQGYIICHLGCHL 358


>07_03_0697 +
           20759176-20759817,20760592-20760708,20761422-20761696,
           20761906-20762068,20762293-20762421,20762989-20763713,
           20763853-20764081
          Length = 759

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 661 RFSIGSAPLDEHHKNRRSSXRWRNP 735
           RFS  SAP+D+H + RR      NP
Sbjct: 132 RFSSSSAPVDKHGRRRRKKGGRENP 156


>07_03_0361 + 17215312-17216217
          Length = 301

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -2

Query: 877 GGGYEKAPRFPRREKGGQVXRQ*AAGSEQESARGSXQGGTPG 752
           G G  K  RF RR + G   R   +G+EQ       +GG  G
Sbjct: 27  GSGRSKTARFLRRRRRGGAVRAAVSGTEQAPETTKKKGGGGG 68


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,356,674
Number of Sequences: 37544
Number of extensions: 404771
Number of successful extensions: 950
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)