Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_L15
(880 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 101 3e-20
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 73 7e-12
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 73 7e-12
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 69 2e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 63 1e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.021
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.083
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 36 1.8
UniRef50_Q4WI82 Cluster: Protein-tyrosine phosphatase, putative;... 35 2.4
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.5
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_Q0K7G9 Cluster: Predicted permease; n=14; cellular orga... 33 7.2
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 33 7.2
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 101 bits (241), Expect = 3e-20
Identities = 43/44 (97%), Positives = 43/44 (97%)
Frame = +2
Query: 677 CPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTXA 808
CPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPT A
Sbjct: 68 CPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAA 111
Score = 91.1 bits (216), Expect = 3e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +1
Query: 547 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRL 669
TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRL
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRL 64
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 73.3 bits (172), Expect = 7e-12
Identities = 40/70 (57%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +2
Query: 602 IKIPGVSPWKLPRALSCSDPAAYGY-CPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVC 778
+KI VS LP ALSCS+PA PPFSL + + GIS RCRSFAPSWAV
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVS 91
Query: 779 TNPPFSPTXA 808
NPPFSPT A
Sbjct: 92 KNPPFSPTAA 101
Score = 34.3 bits (75), Expect = 4.1
Identities = 29/88 (32%), Positives = 33/88 (37%), Gaps = 1/88 (1%)
Frame = +1
Query: 574 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLRI-LSAFLPSGSVALSHSSRCRYLSSV* 750
VR GETRQD K P P RI + F +GSVALSHSS +
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 751 VVRSKLGCVHEPPVQPDRCXLSGTIVLS 834
PP P T+ LS
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLS 110
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 73.3 bits (172), Expect = 7e-12
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +1
Query: 547 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 660
TSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 68.9 bits (161), Expect = 2e-10
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +1
Query: 547 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLRI 675
TSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P L +
Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLPV 134
Score = 58.8 bits (136), Expect = 2e-07
Identities = 40/78 (51%), Positives = 44/78 (56%)
Frame = +3
Query: 312 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 491
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT--------DGDGNFLEDT-RKTLSKEE 76
Query: 492 GTVKRPRCWRFSIGSAPL 545
RPR RFSIGSAPL
Sbjct: 77 ---IRPRRSRFSIGSAPL 91
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 488 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 375
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 62.9 bits (146), Expect = 1e-08
Identities = 36/64 (56%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Frame = -1
Query: 775 HSPAWSERPTPN*DTYSVSYEKAPRFPKGERRTVSVSG-RVGTGERTRE-LPGGNAWYLY 602
+SPAWSERP P+ DT SVSYEKAPRFPKG ++ VSG R G R E G +
Sbjct: 31 YSPAWSERPKPSRDTSSVSYEKAPRFPKG-KKAEQVSGKRQGRNRRAHEGAAGEKSPASL 89
Query: 601 SPVG 590
SPVG
Sbjct: 90 SPVG 93
Score = 46.8 bits (106), Expect = 7e-04
Identities = 24/43 (55%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = -3
Query: 698 PEGRKADSIR-KRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 573
P+G+KA+ + KRQGRNRRAHEGA+ K SL PPLT
Sbjct: 57 PKGKKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 288 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 455
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +1
Query: 676 LSAFLPSGSVALSHSSRCRYLSSV 747
LSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 14 LSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 90 DPDMIRYIDEFGQTTTRMQ 146
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 407 HSKAVIRLSTESGDNAGKNM 466
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 42.3 bits (95), Expect = 0.016
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1
Query: 511 VAGVFXXXXXXXTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 660
++ +F T+ITKI Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.021
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +1
Query: 214 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 336
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 358 ERGSGRAPNTQTASPRALADSLMQ 287
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 35.5 bits (78), Expect = 1.8
Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 775 VHEPPVQPDRCXLSGTIVL-SXPGR 846
+HEPPVQPDRC LSG L S P R
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVR 25
>UniRef50_Q4WI82 Cluster: Protein-tyrosine phosphatase, putative;
n=6; Trichocomaceae|Rep: Protein-tyrosine phosphatase,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 776
Score = 35.1 bits (77), Expect = 2.4
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +2
Query: 524 FHRLRPPXRASQKSTLKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYGYCPPFSLREA 703
+ R+ P SQ S+ V +R P VSPW++P++LS + P LR+
Sbjct: 631 YSRIATPASWSQTSSGTLSVPSTERATP-PSVSPWRIPKSLSHKRSLS---PRPLPLRQ- 685
Query: 704 WRFLIAHAVGISVRCRSFAPSWAV 775
RF A V RS AP+ A+
Sbjct: 686 -RFETAQTAAKDVGTRSLAPADAI 708
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.5
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 497 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 375
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.5
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 248 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 84
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q0K7G9 Cluster: Predicted permease; n=14; cellular
organisms|Rep: Predicted permease - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 274
Score = 33.5 bits (73), Expect = 7.2
Identities = 24/72 (33%), Positives = 32/72 (44%)
Frame = -1
Query: 673 SVSGRVGTGERTRELPGGNAWYLYSPVGXXXXXXXXXXX*CSXRGAEPMEKRQQRGLFTV 494
SV+G V +G +T LP G+ YLY P R A M+ Q R +F
Sbjct: 198 SVAGYVWSGWQTPGLPAGSLGYLYLPALLVIAAASVMTAPLGARTAHRMDVSQLRKVFA- 256
Query: 493 PGLLLAFCSHVL 458
LLL S++L
Sbjct: 257 -ALLLCLASYML 267
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 33.5 bits (73), Expect = 7.2
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1
Query: 775 HSPAWSERPTPN 740
HSPAWSERPTPN
Sbjct: 31 HSPAWSERPTPN 42
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,571,209
Number of Sequences: 1657284
Number of extensions: 16003494
Number of successful extensions: 43691
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 41785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43676
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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