BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_L13
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007662-1|AAH07662.1| 180|Homo sapiens trafficking protein par... 192 1e-48
AY007139-1|AAG02000.1| 180|Homo sapiens protein ( Homo sapiens ... 192 1e-48
AJ224335-1|CAA11902.1| 180|Homo sapiens hBET3 protein protein. 192 1e-48
AF041432-1|AAB96936.1| 180|Homo sapiens bet3 protein. 192 1e-48
AL445224-3|CAI12937.1| 181|Homo sapiens BET3 like (S. cerevisia... 154 5e-37
AL121953-3|CAI21551.1| 181|Homo sapiens BET3 like (S. cerevisia... 154 5e-37
AL445224-2|CAI12936.1| 167|Homo sapiens BET3 like (S. cerevisia... 151 4e-36
AL121953-2|CAI21550.1| 167|Homo sapiens BET3 like (S. cerevisia... 151 4e-36
BC127758-1|AAI27759.1| 97|Homo sapiens Unknown (protein for MG... 79 3e-14
BC127757-1|AAI27758.1| 97|Homo sapiens Unknown (protein for MG... 79 3e-14
AL445224-1|CAI12935.1| 97|Homo sapiens BET3 like (S. cerevisia... 79 3e-14
AK001077-1|BAA91495.1| 161|Homo sapiens protein ( Homo sapiens ... 33 1.4
AJ278120-1|CAB92314.1| 1101|Homo sapiens putative ankyrin-repeat... 33 1.4
AB046856-1|BAB13462.2| 1864|Homo sapiens KIAA1636 protein protein. 33 1.4
>BC007662-1|AAH07662.1| 180|Homo sapiens trafficking protein
particle complex 3 protein.
Length = 180
Score = 192 bits (468), Expect = 1e-48
Identities = 91/162 (56%), Positives = 129/162 (79%), Gaps = 2/162 (1%)
Frame = +1
Query: 226 DAKKVNSELLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLIEDFLARTTSTRCL 405
++KK++SEL TLTYGALV+Q+ K+ EN EDVNK L+++G+N+GVRLIEDFLAR+ RC
Sbjct: 10 ESKKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGFNIGVRLIEDFLARSNVGRCH 69
Query: 406 EMRETADKIQQ-AFKLYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWVEMPSN-NGLKYCA 579
+ RETAD I + AFK+YL + P++T+WS AGDEFSL+ ++ PL ++VE+P N + L Y
Sbjct: 70 DFRETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSN 129
Query: 580 LIPGAIRGALQMVQLDVQCWFVQDQLKGDPVTELRVKYLKEI 705
L+ G +RGAL+MVQ+ V+ FVQD LKGD VTE+R+++++ I
Sbjct: 130 LLCGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRI 171
>AY007139-1|AAG02000.1| 180|Homo sapiens protein ( Homo sapiens
clone CDABP0066 mRNA sequence. ).
Length = 180
Score = 192 bits (468), Expect = 1e-48
Identities = 91/162 (56%), Positives = 129/162 (79%), Gaps = 2/162 (1%)
Frame = +1
Query: 226 DAKKVNSELLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLIEDFLARTTSTRCL 405
++KK++SEL TLTYGALV+Q+ K+ EN EDVNK L+++G+N+GVRLIEDFLAR+ RC
Sbjct: 10 ESKKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGFNIGVRLIEDFLARSNVGRCH 69
Query: 406 EMRETADKIQQ-AFKLYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWVEMPSN-NGLKYCA 579
+ RETAD I + AFK+YL + P++T+WS AGDEFSL+ ++ PL ++VE+P N + L Y
Sbjct: 70 DFRETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSN 129
Query: 580 LIPGAIRGALQMVQLDVQCWFVQDQLKGDPVTELRVKYLKEI 705
L+ G +RGAL+MVQ+ V+ FVQD LKGD VTE+R+++++ I
Sbjct: 130 LLCGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRI 171
>AJ224335-1|CAA11902.1| 180|Homo sapiens hBET3 protein protein.
Length = 180
Score = 192 bits (468), Expect = 1e-48
Identities = 91/162 (56%), Positives = 129/162 (79%), Gaps = 2/162 (1%)
Frame = +1
Query: 226 DAKKVNSELLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLIEDFLARTTSTRCL 405
++KK++SEL TLTYGALV+Q+ K+ EN EDVNK L+++G+N+GVRLIEDFLAR+ RC
Sbjct: 10 ESKKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGFNIGVRLIEDFLARSNVGRCH 69
Query: 406 EMRETADKIQQ-AFKLYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWVEMPSN-NGLKYCA 579
+ RETAD I + AFK+YL + P++T+WS AGDEFSL+ ++ PL ++VE+P N + L Y
Sbjct: 70 DFRETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSN 129
Query: 580 LIPGAIRGALQMVQLDVQCWFVQDQLKGDPVTELRVKYLKEI 705
L+ G +RGAL+MVQ+ V+ FVQD LKGD VTE+R+++++ I
Sbjct: 130 LLCGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRI 171
>AF041432-1|AAB96936.1| 180|Homo sapiens bet3 protein.
Length = 180
Score = 192 bits (468), Expect = 1e-48
Identities = 91/162 (56%), Positives = 129/162 (79%), Gaps = 2/162 (1%)
Frame = +1
Query: 226 DAKKVNSELLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLIEDFLARTTSTRCL 405
++KK++SEL TLTYGALV+Q+ K+ EN EDVNK L+++G+N+GVRLIEDFLAR+ RC
Sbjct: 10 ESKKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGFNIGVRLIEDFLARSNVGRCH 69
Query: 406 EMRETADKIQQ-AFKLYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWVEMPSN-NGLKYCA 579
+ RETAD I + AFK+YL + P++T+WS AGDEFSL+ ++ PL ++VE+P N + L Y
Sbjct: 70 DFRETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSN 129
Query: 580 LIPGAIRGALQMVQLDVQCWFVQDQLKGDPVTELRVKYLKEI 705
L+ G +RGAL+MVQ+ V+ FVQD LKGD VTE+R+++++ I
Sbjct: 130 LLCGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRI 171
>AL445224-3|CAI12937.1| 181|Homo sapiens BET3 like (S. cerevisiae)
protein.
Length = 181
Score = 154 bits (373), Expect = 5e-37
Identities = 79/159 (49%), Positives = 112/159 (70%), Gaps = 3/159 (1%)
Frame = +1
Query: 235 KVNSELLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLIEDFLARTTSTRCLEMR 414
K+N +L LTYGALV+Q+ K+ E EDVN++L+++GY +G RL+EDFLAR+ RC
Sbjct: 13 KINKDLFVLTYGALVAQLCKDYEKDEDVNQYLDKMGYGIGTRLVEDFLARSCVGRCHSYS 72
Query: 415 ETADKIQQ-AFKLYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWV-EMPS-NNGLKYCALI 585
E D I Q AFK+YL + P+VT +S+ +EFSL+ + PL E+V E+P+ + L YC L+
Sbjct: 73 EIIDIIAQVAFKMYLGITPSVTCNNSSKNEFSLILEKNPLVEFVEELPAGRSSLCYCNLL 132
Query: 586 PGAIRGALQMVQLDVQCWFVQDQLKGDPVTELRVKYLKE 702
G IRGAL+MV L F+QD+LKGD VTE+ + +LK+
Sbjct: 133 CGIIRGALEMVHLAADVTFLQDRLKGDSVTEIGITFLKK 171
>AL121953-3|CAI21551.1| 181|Homo sapiens BET3 like (S. cerevisiae)
protein.
Length = 181
Score = 154 bits (373), Expect = 5e-37
Identities = 79/159 (49%), Positives = 112/159 (70%), Gaps = 3/159 (1%)
Frame = +1
Query: 235 KVNSELLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLIEDFLARTTSTRCLEMR 414
K+N +L LTYGALV+Q+ K+ E EDVN++L+++GY +G RL+EDFLAR+ RC
Sbjct: 13 KINKDLFVLTYGALVAQLCKDYEKDEDVNQYLDKMGYGIGTRLVEDFLARSCVGRCHSYS 72
Query: 415 ETADKIQQ-AFKLYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWV-EMPS-NNGLKYCALI 585
E D I Q AFK+YL + P+VT +S+ +EFSL+ + PL E+V E+P+ + L YC L+
Sbjct: 73 EIIDIIAQVAFKMYLGITPSVTCNNSSKNEFSLILEKNPLVEFVEELPAGRSSLCYCNLL 132
Query: 586 PGAIRGALQMVQLDVQCWFVQDQLKGDPVTELRVKYLKE 702
G IRGAL+MV L F+QD+LKGD VTE+ + +LK+
Sbjct: 133 CGIIRGALEMVHLAADVTFLQDRLKGDSVTEIGITFLKK 171
>AL445224-2|CAI12936.1| 167|Homo sapiens BET3 like (S. cerevisiae)
protein.
Length = 167
Score = 151 bits (365), Expect = 4e-36
Identities = 78/157 (49%), Positives = 110/157 (70%), Gaps = 3/157 (1%)
Frame = +1
Query: 241 NSELLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLIEDFLARTTSTRCLEMRET 420
N +L LTYGALV+Q+ K+ E EDVN++L+++GY +G RL+EDFLAR+ RC E
Sbjct: 1 NKDLFVLTYGALVAQLCKDYEKDEDVNQYLDKMGYGIGTRLVEDFLARSCVGRCHSYSEI 60
Query: 421 ADKIQQ-AFKLYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWV-EMPS-NNGLKYCALIPG 591
D I Q AFK+YL + P+VT +S+ +EFSL+ + PL E+V E+P+ + L YC L+ G
Sbjct: 61 IDIIAQVAFKMYLGITPSVTCNNSSKNEFSLILEKNPLVEFVEELPAGRSSLCYCNLLCG 120
Query: 592 AIRGALQMVQLDVQCWFVQDQLKGDPVTELRVKYLKE 702
IRGAL+MV L F+QD+LKGD VTE+ + +LK+
Sbjct: 121 IIRGALEMVHLAADVTFLQDRLKGDSVTEIGITFLKK 157
>AL121953-2|CAI21550.1| 167|Homo sapiens BET3 like (S. cerevisiae)
protein.
Length = 167
Score = 151 bits (365), Expect = 4e-36
Identities = 78/157 (49%), Positives = 110/157 (70%), Gaps = 3/157 (1%)
Frame = +1
Query: 241 NSELLTLTYGALVSQMLKETENTEDVNKHLERIGYNMGVRLIEDFLARTTSTRCLEMRET 420
N +L LTYGALV+Q+ K+ E EDVN++L+++GY +G RL+EDFLAR+ RC E
Sbjct: 1 NKDLFVLTYGALVAQLCKDYEKDEDVNQYLDKMGYGIGTRLVEDFLARSCVGRCHSYSEI 60
Query: 421 ADKIQQ-AFKLYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWV-EMPS-NNGLKYCALIPG 591
D I Q AFK+YL + P+VT +S+ +EFSL+ + PL E+V E+P+ + L YC L+ G
Sbjct: 61 IDIIAQVAFKMYLGITPSVTCNNSSKNEFSLILEKNPLVEFVEELPAGRSSLCYCNLLCG 120
Query: 592 AIRGALQMVQLDVQCWFVQDQLKGDPVTELRVKYLKE 702
IRGAL+MV L F+QD+LKGD VTE+ + +LK+
Sbjct: 121 IIRGALEMVHLAADVTFLQDRLKGDSVTEIGITFLKK 157
>BC127758-1|AAI27759.1| 97|Homo sapiens Unknown (protein for
MGC:157869) protein.
Length = 97
Score = 78.6 bits (185), Expect = 3e-14
Identities = 41/87 (47%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = +1
Query: 448 LYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWVE-MPSN-NGLKYCALIPGAIRGALQMVQ 621
+YL + P+VT +S+ +EFSL+ + PL E+VE +P+ + L YC L+ G IRGAL+MV
Sbjct: 1 MYLGITPSVTCNNSSKNEFSLILEKNPLVEFVEELPAGRSSLCYCNLLCGIIRGALEMVH 60
Query: 622 LDVQCWFVQDQLKGDPVTELRVKYLKE 702
L F+QD+LKGD VTE+ + +LK+
Sbjct: 61 LAADVTFLQDRLKGDSVTEIGITFLKK 87
>BC127757-1|AAI27758.1| 97|Homo sapiens Unknown (protein for
MGC:157868) protein.
Length = 97
Score = 78.6 bits (185), Expect = 3e-14
Identities = 41/87 (47%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = +1
Query: 448 LYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWVE-MPSN-NGLKYCALIPGAIRGALQMVQ 621
+YL + P+VT +S+ +EFSL+ + PL E+VE +P+ + L YC L+ G IRGAL+MV
Sbjct: 1 MYLGITPSVTCNNSSKNEFSLILEKNPLVEFVEELPAGRSSLCYCNLLCGIIRGALEMVH 60
Query: 622 LDVQCWFVQDQLKGDPVTELRVKYLKE 702
L F+QD+LKGD VTE+ + +LK+
Sbjct: 61 LAADVTFLQDRLKGDSVTEIGITFLKK 87
>AL445224-1|CAI12935.1| 97|Homo sapiens BET3 like (S. cerevisiae)
protein.
Length = 97
Score = 78.6 bits (185), Expect = 3e-14
Identities = 41/87 (47%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = +1
Query: 448 LYLSMQPTVTSWSSAGDEFSLVWDHCPLSEWVE-MPSN-NGLKYCALIPGAIRGALQMVQ 621
+YL + P+VT +S+ +EFSL+ + PL E+VE +P+ + L YC L+ G IRGAL+MV
Sbjct: 1 MYLGITPSVTCNNSSKNEFSLILEKNPLVEFVEELPAGRSSLCYCNLLCGIIRGALEMVH 60
Query: 622 LDVQCWFVQDQLKGDPVTELRVKYLKE 702
L F+QD+LKGD VTE+ + +LK+
Sbjct: 61 LAADVTFLQDRLKGDSVTEIGITFLKK 87
>AK001077-1|BAA91495.1| 161|Homo sapiens protein ( Homo sapiens
cDNA FLJ10215 fis, clone HEMBA1006737, weakly similar to
ANKYRIN, BRAIN VARIANT 2. ).
Length = 161
Score = 33.1 bits (72), Expect = 1.4
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 469 TVTSWSSAGDEFSLVWDHCPLSEWVEMPSNNGLKYCALIPGAIRGALQMVQLDVQC-WFV 645
T +++A S+V C V+ NG CAL+ A+RG L++V+ +QC W +
Sbjct: 71 TPLGYAAAAGYLSIVVLLCKKRAKVDHLDKNG--QCALVHAALRGHLEVVKFLIQCDWTM 128
Query: 646 QDQLKG 663
Q +G
Sbjct: 129 AGQQQG 134
>AJ278120-1|CAB92314.1| 1101|Homo sapiens putative ankyrin-repeat
containing protein protein.
Length = 1101
Score = 33.1 bits (72), Expect = 1.4
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 469 TVTSWSSAGDEFSLVWDHCPLSEWVEMPSNNGLKYCALIPGAIRGALQMVQLDVQC-WFV 645
T +++A S+V C V+ NG CAL+ A+RG L++V+ +QC W +
Sbjct: 21 TPLGYAAAAGYLSIVVLLCKKRAKVDHLDKNG--QCALVHAALRGHLEVVKFLIQCDWTM 78
Query: 646 QDQLKG 663
Q +G
Sbjct: 79 AGQQQG 84
>AB046856-1|BAB13462.2| 1864|Homo sapiens KIAA1636 protein protein.
Length = 1864
Score = 33.1 bits (72), Expect = 1.4
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 469 TVTSWSSAGDEFSLVWDHCPLSEWVEMPSNNGLKYCALIPGAIRGALQMVQLDVQC-WFV 645
T +++A S+V C V+ NG CAL+ A+RG L++V+ +QC W +
Sbjct: 794 TPLGYAAAAGYLSIVVLLCKKRAKVDHLDKNG--QCALVHAALRGHLEVVKFLIQCDWTM 851
Query: 646 QDQLKG 663
Q +G
Sbjct: 852 AGQQQG 857
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,307,811
Number of Sequences: 237096
Number of extensions: 2170176
Number of successful extensions: 12383
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12364
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -