Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_L12
         (893 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   4.3  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   4.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   4.3  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   4.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   4.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   7.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.9  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 735 FLGSYVGGAAQSVSEPTTADTCGWWATV 652
           F+ S  GG   S+ +  T   CG W  +
Sbjct: 208 FVLSRAGGLVNSLYQNATRKVCGVWKRI 235


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 159 TDVKVAPNFVFGETNKSED 215
           ++  ++P+ VFG+  KSED
Sbjct: 201 SEQSLSPDTVFGDDGKSED 219


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 256 SNAGTFPAGNFFKKSSDL 203
           S  GT+P+ N++  +SD+
Sbjct: 12  SQHGTYPSDNYYNYTSDI 29


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 256 SNAGTFPAGNFFKKSSDL 203
           S  GT+P+ N++  +SD+
Sbjct: 12  SQHGTYPSDNYYNYTSDI 29


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 256 SNAGTFPAGNFFKKSSDL 203
           S  GT+P+ N++  +SD+
Sbjct: 12  SQHGTYPSDNYYNYTSDI 29


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +2

Query: 482 GRLKSTGRTSSHTHLPWLPRESHLP 556
           GR + TG  +   + PW    +H P
Sbjct: 512 GRWRETGEAACDPYRPWQTVYNHRP 536


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 591 KACSSVXEDNDIGKCDSLGNQGRCV*EDVRPVLLRRPVGQ 472
           K C S+ E  ++  CDS         E  + V +R P+GQ
Sbjct: 411 KKCGSLREIKEVSDCDSS--------ESRKEVYVRVPLGQ 442


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,442
Number of Sequences: 336
Number of extensions: 4518
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)