Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_L12
(893 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 101 8e-22
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 100 2e-21
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 45 9e-05
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 44 1e-04
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 41 0.001
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 38 0.011
03_01_0249 - 1935355-1935827,1936129-1936330 34 0.18
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 32 0.54
06_01_0611 + 4420873-4422207 30 2.9
10_08_0710 + 20070655-20070990,20071074-20071469 29 3.8
11_06_0584 - 25220371-25222917 29 6.6
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 29 6.6
02_04_0633 - 24616563-24617279 29 6.6
01_01_0735 + 5730783-5733320 29 6.6
03_05_1139 - 30689514-30689609,30689795-30689956,30691245-306912... 28 8.7
02_03_0179 + 16025962-16026143,16026570-16026684,16026852-160270... 28 8.7
>02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 101 bits (242), Expect = 8e-22
Identities = 63/159 (39%), Positives = 88/159 (55%), Gaps = 13/159 (8%)
Frame = +3
Query: 93 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 272
VL+T+ N A+KALIAA+YSG V++A NF G +NK+ ++LK P GKVP E+ DG
Sbjct: 565 VLHTFDGNKNAFKALIAAEYSGVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGP 624
Query: 273 VLLTESNAIAYYVANES-------------LRGGDLATQARVWQWASWSDSELLPASCAW 413
V ESNAIA YV + S L G L A + QW +S +E+ + W
Sbjct: 625 VF--ESNAIARYVLSSSHFPEVTRSKSDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKW 682
Query: 414 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 530
+FP LG + + E A + L +L L+ HL + T+L
Sbjct: 683 LFPRLGFAPYVAVSEEAAIAALKRSLGALNTHLASNTYL 721
Score = 95.5 bits (227), Expect = 5e-20
Identities = 61/159 (38%), Positives = 85/159 (53%), Gaps = 13/159 (8%)
Frame = +3
Query: 93 VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 272
VL+ N A+KALIAA+YSG V++ NF G +NK+ +FLK P GK+P E+ DG
Sbjct: 4 VLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGP 63
Query: 273 VLLTESNAIAYYV-------------ANESLRGGDLATQARVWQWASWSDSELLPASCAW 413
V ESNAIA YV A+ L G L A + QW +S +E+ W
Sbjct: 64 VF--ESNAIARYVLSHCHFPEVTRSKADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKW 121
Query: 414 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 530
++P LGI + + E A + L +L L+ HL + T+L
Sbjct: 122 LYPRLGIAPYVAVSEEAAIAALKRSLGALNTHLASNTYL 160
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 578 LLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPK 733
L F ++ S S +V+R+F T+ +QP V+G + + P K
Sbjct: 176 LYMGFARIMTKSFTSEFPHVERYFWTMVNQPNFKKVLGDVKQAESVPPVQKK 227
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 100 bits (239), Expect = 2e-21
Identities = 62/162 (38%), Positives = 88/162 (54%), Gaps = 4/162 (2%)
Frame = +3
Query: 57 GSFXKTPTMAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPA 236
G+ P A VL+ N A+KALIAA+Y+G V++ NF G +NK+ +FLK P
Sbjct: 16 GARPAAPVGMALVLHCGSGNKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPEFLKMNPL 75
Query: 237 GKVPAFESADGKVLLTESNAIAYYVA----NESLRGGDLATQARVWQWASWSDSELLPAS 404
GK+P E+ +G V ESNAIA YVA N SL G L + + QW +S +E+
Sbjct: 76 GKIPVLETPEGAVF--ESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSATEVDANI 133
Query: 405 CAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFL 530
W++P LG + E A + L +L L+ HL + T+L
Sbjct: 134 GRWLYPRLGFGPYVPVLEEFAITSLKRSLGALNTHLASNTYL 175
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 578 LLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPK 733
L + F +L S S +V+R+F T+ +QP V+G + P K
Sbjct: 191 LYYGFVRILIKSFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAESVPPVQKK 242
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 44.8 bits (101), Expect = 9e-05
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Frame = +3
Query: 135 LIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 311
L+ + +G + VA + GE N+S L + P GK+PAFE DG+V L ES AI YV
Sbjct: 18 LVCLEEAGASYELVAVDMAAGE-NRSRHHLARSPFGKIPAFE--DGEVTLFESRAIQRYV 74
Query: 312 AN-----ESLRGGDLATQARVWQW 368
+ LR G+L A V W
Sbjct: 75 LRNYNKPDLLREGNLEESAMVDMW 98
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 44.4 bits (100), Expect = 1e-04
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Frame = +3
Query: 129 KALIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 305
+ L+ + G D + V +F+ GE N S + +++ P GK+PA + DG ++L ES AIA
Sbjct: 17 RVLVCLEEVGADYELVTVDFLAGEQN-SPEHVERNPFGKIPALQ--DGDLVLFESRAIAK 73
Query: 306 YVAN-------ESLRGGDLATQARVWQWASWSDSELLPA------SCAWVFPYLGIMQFN 446
Y+ + LR D+ A V W + PA C +FP + + N
Sbjct: 74 YILRKYKSSKVDLLRESDIREAALVDVWTEVEAHQYYPALSPIVFECI-IFPIMRGVPTN 132
Query: 447 KQNVERAKSDLLAALKVLDGHLLTRTFL 530
+Q V + L L+ + L +L
Sbjct: 133 QQVVHESLEKLKKVLETYEARLSGSRYL 160
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 41.1 bits (92), Expect = 0.001
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Frame = +3
Query: 81 MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFES 260
MA +Y + + L+ + G + +V P + +K + + P G+VPAFE
Sbjct: 1 MAPAKVYGPAMSTNVMRILVCLEEVGAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFE- 59
Query: 261 ADGKVLLTESNAIAYYV----ANESLRGGDLATQARVWQWASWSDSELLPASCAWVF 419
DG + L ES AI+ Y+ ++ LR +L+ A V W S A +F
Sbjct: 60 -DGDLTLFESRAISKYILRKHGSDLLRESNLSESAMVDVWLEVESSHFDGAMSPIIF 115
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 37.9 bits (84), Expect = 0.011
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Frame = +3
Query: 129 KALIAAQYSGTDVKVAPNFVFGET-NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 305
+ L+ + G D ++ + FG+ +K D L + P G+VPAF+ DG ++L ES AI
Sbjct: 17 RVLLCLEEVGADYEIV-DVDFGDREHKGPDHLARNPFGQVPAFQ--DGDLMLFESRAICR 73
Query: 306 YVANES--------LRGGDLATQARVWQW 368
Y+ + LR GD + A V W
Sbjct: 74 YILRKHRATDEANLLREGDPSESAVVDAW 102
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 33.9 bits (74), Expect = 0.18
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +3
Query: 201 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQAR 356
+KS FLK P G+VPAF+ D + ES AI Y+ ++ G+ R
Sbjct: 42 HKSPSFLKLQPFGQVPAFK--DSLTTVFESRAICRYICDQYADSGNKTLMGR 91
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 32.3 bits (70), Expect = 0.54
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 96 LYTYPENFRAYKALIAAQYSGTDVKV-APNFVFGETNKSEDFLKKFPAGKVPAFESADGK 272
LY+Y + +++ IA G + + A N + GE + E F+K P VPA DG
Sbjct: 16 LYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPE-FMKVNPMKFVPAL--VDGD 72
Query: 273 VLLTESNAIAYYVANE 320
++ +S AIA Y+ ++
Sbjct: 73 AVIGDSYAIALYLEDK 88
>06_01_0611 + 4420873-4422207
Length = 444
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +1
Query: 619 FVADKRSAL-----VPDRRPPAASVGRRRLAHALC 708
+V D+ +AL P RRPPA S RRRLA + C
Sbjct: 279 YVMDEHAALRVAVRTPKRRPPARSRSRRRLALSEC 313
>10_08_0710 + 20070655-20070990,20071074-20071469
Length = 243
Score = 29.5 bits (63), Expect = 3.8
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +3
Query: 201 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV------ANESLRGGDLATQARVW 362
NKSE L P K +GK + ES I YV A ESL D +A
Sbjct: 45 NKSELLLSSNPVHKKVPVLIHNGKPIC-ESQIIVEYVDEAFPDAGESLLPSDPYDRAVAR 103
Query: 363 QWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLD 503
WA++ + + +P AW LG+ + K A +LAA++ L+
Sbjct: 104 FWAAYINDKFMP---AWQKASLGLTEEEK---AEAVKQMLAAIENLE 144
>11_06_0584 - 25220371-25222917
Length = 848
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 469 FARSTFCLLNCMIPR*GKTQAQEAGSSSLSD 377
+ +ST C C +PR K +AG S+++D
Sbjct: 408 WTQSTICCCYCRVPRIMKATTADAGGSNIND 438
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 216 FLKKFPAGKVPAFESADGK 272
FLK P GKVP F DGK
Sbjct: 49 FLKISPEGKVPVFNGGDGK 67
>02_04_0633 - 24616563-24617279
Length = 238
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 292 MPSLTTLPMKVSAEEIWLPKPVSGSGHHGLTANYC 396
MP+ TT+ M+ S + W P+ G HG+ N+C
Sbjct: 1 MPAATTIQMEASPADHWSPRHRRRCGCHGV--NWC 33
>01_01_0735 + 5730783-5733320
Length = 845
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 176 TEFRIWRDQQVRRLLEEVSCRKSACIRKCRWKGA 277
T F +W D + + +E SC+K C+ C K A
Sbjct: 372 TYFHLWGDSRGAPMTDEESCKKD-CLSNCSCKAA 404
>03_05_1139 -
30689514-30689609,30689795-30689956,30691245-30691299,
30691695-30691959,30692749-30692959,30693542-30693721,
30693802-30693899,30694211-30694277,30694897-30694963,
30695335-30695447,30695988-30696032,30696116-30696223,
30696582-30696791,30697464-30697670,30697786-30697875,
30698168-30698389
Length = 731
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/69 (18%), Positives = 33/69 (47%)
Frame = -3
Query: 273 PFHRHFRMQALFRQETSSRSLRTCWSRQIRNSVLLSHQSRNIVRRSTLYKRGSFPDKCKV 94
PF + + R++T + R + + +S++++ ++RR Y + PD +
Sbjct: 665 PFGHDQTQERILREDTIINARRV----EFPSKPAVSNEAKELIRRCLTYNQAERPDVLTI 720
Query: 93 PRPPWLEFS 67
+ P+L ++
Sbjct: 721 AQEPYLSYA 729
>02_03_0179 +
16025962-16026143,16026570-16026684,16026852-16027065,
16027346-16027397,16027411-16027696
Length = 282
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 716 EEPHRA*ASRRRPTLAAGGRRSGTNAERLSATNGRSGLARAGKHAA 579
++PHR A R+P A+G G A R+S + + R HAA
Sbjct: 32 QQPHRP-APLRQPLAASGHCGGGRGARRVSRSRSSAAHPRGRLHAA 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,737,169
Number of Sequences: 37544
Number of extensions: 558306
Number of successful extensions: 1811
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1808
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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