Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_L11
(891 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0199 - 14160881-14161054,14161151-14161306,14161802-141619... 31 1.6
11_06_0383 + 22965599-22966090 30 2.1
05_03_0029 - 7525408-7525634,7526253-7526457 30 2.1
04_01_0303 + 4132988-4133184,4133701-4134202,4134261-4134638,413... 30 2.1
11_04_0183 + 14642037-14642069,14642099-14642220,14642791-146429... 29 3.8
07_03_1615 - 28157237-28157472,28157649-28157728,28157853-281580... 29 3.8
02_01_0158 - 1103461-1104186 29 3.8
06_01_0810 + 6111962-6112507 29 5.0
01_01_0738 + 5749067-5749435 29 5.0
12_01_0750 - 6754126-6755248,6755331-6755791 29 6.6
11_06_0093 + 19999503-20000231,20000308-20000742,20000829-200016... 29 6.6
10_01_0252 + 2646074-2646430,2646476-2648158 29 6.6
05_01_0450 + 3577928-3579526,3579695-3579832 29 6.6
04_04_0863 + 28847761-28848009,28848108-28848131,28849388-288494... 29 6.6
03_06_0335 + 33211705-33211800,33211886-33211982,33212078-332122... 29 6.6
02_04_0055 - 19290975-19292312 29 6.6
02_01_0300 + 2007414-2007665,2009268-2009320,2009409-2009453,200... 29 6.6
08_02_0094 + 12277756-12278574,12280314-12280418,12280487-122805... 28 8.7
04_01_0012 - 210670-210759,210939-211008,211138-211235,211318-21... 28 8.7
03_05_1150 - 30758981-30759778,30759970-30760729,30760823-307609... 28 8.7
02_02_0458 - 10510465-10510515,10510606-10511007 28 8.7
01_01_0439 - 3299442-3299805,3299847-3300010 28 8.7
>08_02_0199 -
14160881-14161054,14161151-14161306,14161802-14161921,
14162046-14162143,14162969-14163041,14164472-14164619,
14165108-14165232,14165611-14165652,14165757-14166074,
14166633-14167559,14167584-14167852,14167946-14168255,
14169281-14169465,14170795-14170901,14171320-14171486
Length = 1072
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +1
Query: 481 SKALWPKWSLCSTAKHKGPACPYARRAYFSVPALRLRRKGASVMGT----RRPRPPRCS 645
++AL P A + P CP+A A S P R+GA+ +G+ RR R CS
Sbjct: 3 ARALGPPPPHALGATRQAPRCPHAAAADASAPPTHGYRRGAAALGSALSARRGRHTLCS 61
>11_06_0383 + 22965599-22966090
Length = 163
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 622 RPRPPRCSKTWSTSRHCC 675
RP P+C + WSTS CC
Sbjct: 16 RPLGPQCRRPWSTSTSCC 33
>05_03_0029 - 7525408-7525634,7526253-7526457
Length = 143
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 416 CCCDDTGENGKT-KRGIGEGGACQRHC 493
C D G NG+ RG+ +GG C+R C
Sbjct: 100 CGLSDDGGNGRAVTRGLSDGGGCRRTC 126
>04_01_0303 +
4132988-4133184,4133701-4134202,4134261-4134638,
4134657-4135301
Length = 573
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 508 LCSTAKHKGPACPYARRAYFSVPALRLRRKGASVMGTRRPRPPRCSKTWSTS 663
+CST HK P+ P+ +Y A R+ ++G +P R TW+T+
Sbjct: 63 ICSTNGHKAPSRPWTLTSYVRSAATRV------ILGMTARKPVRRRCTWATT 108
>11_04_0183 +
14642037-14642069,14642099-14642220,14642791-14642974,
14643148-14643348
Length = 179
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 844 F*LTLQVXICRRISAQASGCXGEAGGRRPLPRAGLSAHAASNGSRVSLSCKTRL 683
F L +C+R +A G G +GG RP R+G + S G + S +RL
Sbjct: 41 FLLHFMYILCKRFAAGGDGRRGGSGG-RPSARSGGRGGSGSGGGPRATSAGSRL 93
>07_03_1615 -
28157237-28157472,28157649-28157728,28157853-28158009,
28158379-28158565,28158646-28158772,28159218-28159805,
28159898-28160443,28161579-28161620,28162081-28162145,
28162273-28162377,28162682-28162741,28163149-28163237,
28163611-28163732,28163862-28163968,28164041-28164111,
28164377-28164470,28165010-28165247,28166112-28166347
Length = 1049
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 811 RISAQASGCXGEAGGRRPLPRAGLSAHAASNGSRVSLSCKTRL 683
R++ + SGC E GR PLP +A A +G + C+ RL
Sbjct: 528 RLAWRLSGCFQEDSGRPPLPPCDAAA-AHGHGHADMVHCRERL 569
>02_01_0158 - 1103461-1104186
Length = 241
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 422 CDDTGENGKTKRGIGEGGACQRHCGPSGHYAQ 517
C ++G G G G GGAC +CG +GH A+
Sbjct: 174 CFNSGGGGGGGGGGGGGGACY-NCGETGHLAR 204
>06_01_0810 + 6111962-6112507
Length = 181
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +1
Query: 523 KHKGPACPYARRAYFSVPALRLRRKGASVMGTRRPRPPRCSKTWSTSRHCCCSLSGSYRR 702
+H CP+ R RL R A V P P S + S+S C + GSY
Sbjct: 22 RHAAGVCPFCLRD-------RLSRLSAEVASAASPSPSSASSSGSSSSLCSSTGEGSYSA 74
Query: 703 A 705
A
Sbjct: 75 A 75
>01_01_0738 + 5749067-5749435
Length = 122
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +1
Query: 535 PACPYARRAYFSVPALRLRRKGASVMGTRRPRPPRCSKTWSTSRHC 672
PA P +R A FS A + S +G R P PPR S WS + C
Sbjct: 62 PATPLSRAA-FSTHAGII--SVPSRVGARDPSPPRKSTKWSQGQFC 104
>12_01_0750 - 6754126-6755248,6755331-6755791
Length = 527
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +1
Query: 574 PALRLRRKGASVMGTRRPRPPRCSKTWSTSRHCCCSLSG 690
PAL L R T R PPR W TS+ +L G
Sbjct: 192 PALELNRHKCGSSATERNEPPREFLRWLTSQPSWAALGG 230
>11_06_0093 +
19999503-20000231,20000308-20000742,20000829-20001670,
20001748-20001916
Length = 724
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +3
Query: 534 ASLPVRTARLLQRSRTQTPSEGGVSDGNASPAPASLLQDVVDIKTLLLQLKRVLQESETL 713
A +PV+ AR R+R + S+G +S N P ++ Q +V++ + V +
Sbjct: 206 ADIPVQRARNWARTRVKKNSDGTLSFPN--PEDQAVYQKIVELNAERQASQEVCPQKRED 263
Query: 714 DPLLAACAESPARGNGR 764
D L A RG R
Sbjct: 264 DILTKALGNEEHRGRTR 280
>10_01_0252 + 2646074-2646430,2646476-2648158
Length = 679
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 516 NGQAQRASLPVRTARLLQRSRTQTPS--EGGVSDGNASPAPASLLQDVVD 659
NG A ASL + LQR +T+ PS EG ++D S + S++ D+ D
Sbjct: 628 NGAASAASLSSDKSLALQRKKTEVPSGDEGNIAD-VPSTSNDSIVIDIGD 676
>05_01_0450 + 3577928-3579526,3579695-3579832
Length = 578
Score = 28.7 bits (61), Expect = 6.6
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +3
Query: 405 SEVIVVVMTLAKMEKPSVVLEKEAPVKGIVAQVVTMLNGQAQRASLPVRTARLLQRSRT- 581
S +VV +LA ++ + V+ + + M + +AQ L A L++ S
Sbjct: 101 SRALVVAASLADLQMDAEVISAGMVRGALDTGALAMADVEAQ---LGASAAGLVEESLKV 157
Query: 582 -QTPSEGGVSDGNASPAPASLLQDVVDIKTLLLQLKRVLQESETLDPL 722
+ PSE V+D A+ A DI+ ++L+L L + LD L
Sbjct: 158 KRAPSEVDVADEEAASALRKRCLSSYDIRAVILELAVKLDAMKHLDVL 205
>04_04_0863 +
28847761-28848009,28848108-28848131,28849388-28849460,
28849550-28849684,28850191-28850411,28851747-28851983
Length = 312
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 618 ASPAPASLLQDVVDIKTLLLQLKRV-LQESETLDPLLAACAESPARGNGRRPPASPXHPD 794
AS PA+ V + T R+ L +L L +A A +PA G+ R+P A P
Sbjct: 11 ASAVPAAAAVAAVALSTNSSSSSRLRLPSPASLPSLSSAYAAAPASGSARKPNAVPPMAA 70
Query: 795 ACA 803
A A
Sbjct: 71 AAA 73
>03_06_0335 +
33211705-33211800,33211886-33211982,33212078-33212204,
33212953-33213138,33213702-33213789,33214028-33214084,
33214171-33214260,33214339-33214461,33215024-33215098,
33215169-33215228,33215464-33215580,33215854-33216093,
33216181-33216246,33216370-33216459,33216914-33217003,
33217309-33217398,33217702-33217770,33217841-33217921,
33218108-33218215,33218336-33218439,33218822-33218935,
33219018-33219231
Length = 793
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Frame = +3
Query: 459 VLEKEAPVKGIVAQVVTMLNG-QAQRASLPVRTARLLQRSRTQTPSEGGVSDGNA---SP 626
+ KEAP K ++ +V M G Q L +R + L Q SR + P G +G+A +
Sbjct: 118 IKSKEAPAKDVLKDLVEMCRGIQHPLRGLFLR-SYLSQISRDKLPDIGSEYEGDADSINV 176
Query: 627 APASLLQDVVDIKTLLLQLK 686
A +LQ+ +++ L ++++
Sbjct: 177 AVEFVLQNFIEMNKLWVRMQ 196
>02_04_0055 - 19290975-19292312
Length = 445
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 460 YWRRRRLSKALWPKWSLCSTAKH-KGPACPYARRAYFSVPALRLRRKGASVMGTRRPRPP 636
+W LS + + ++ ST+ G A ARR SV + +G S G + P
Sbjct: 172 FWSFLYLSSSPYTHQAVTSTSYGANGGAAAAARRKSVSVASAAWASRGGSAAGAHEQQQP 231
Query: 637 RCSKTWSTS 663
R + T S S
Sbjct: 232 RAAATSSVS 240
>02_01_0300 +
2007414-2007665,2009268-2009320,2009409-2009453,
2009559-2009661
Length = 150
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +3
Query: 528 QRASLPVRTARLLQRSRTQTPSEGGVSDGNASPAPASLLQDVVD-IKTLLLQLKRVLQES 704
+RA+ PV + Q+ R T GG + + L + + L L+ L E
Sbjct: 31 RRAARPVSGQQQQQQRRRPTDVGGGAAMRSVGYVGKHRLSAAIARLDQELQSLQDELNEL 90
Query: 705 ETLDPLLAACAESPARGNGRRPPASP 782
ET++P AAC G+ P P
Sbjct: 91 ETMEPASAACQGVITSTEGKSDPLLP 116
>08_02_0094 +
12277756-12278574,12280314-12280418,12280487-12280543,
12280969-12281041,12281525-12281703,12281788-12281961,
12282041-12282326,12282433-12282509,12282599-12282668,
12282751-12282822,12282920-12283155,12283240-12283374,
12283466-12283761,12284237-12284408,12284510-12284608,
12284704-12284835,12284950-12285050,12285426-12285615,
12285723-12285761
Length = 1103
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 275 IRQLQKFQWEEAVYELVLNYLLKIFSSN 358
I L+ + W + +Y+ + +L K F SN
Sbjct: 374 IENLRNYDWSKFIYDWTMTFLKKFFKSN 401
>04_01_0012 -
210670-210759,210939-211008,211138-211235,211318-211427,
211533-211683,212247-212391,212483-212749,212819-212957,
213036-213270
Length = 434
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 42 DFESCNSARTRSYVIGHHTCSTRPTQISLYD 134
+F+S NSA + Y + H C T+ +SL D
Sbjct: 300 EFQSANSALLKGYGLVHEDCITKMRLMSLLD 330
>03_05_1150 -
30758981-30759778,30759970-30760729,30760823-30760920,
30761997-30762521
Length = 726
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 480 VKGIVAQVVTMLNGQAQRASLPVRTARLL 566
+ GI+AQ++ + GQ A LP R RLL
Sbjct: 80 ISGILAQILVLPAGQFMAAVLPSREVRLL 108
>02_02_0458 - 10510465-10510515,10510606-10511007
Length = 150
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +3
Query: 669 LLLQLKRVLQESETLDPLLAACAESPARGNGRRPPASPXHPDACAEMRR 815
+L L +V+ E LDP AA E A+ NGR+ A +P E+RR
Sbjct: 1 MLKFLSKVVVEYCPLDPRKAAVVELLAQCNGRK--AKDSNPACSVELRR 47
>01_01_0439 - 3299442-3299805,3299847-3300010
Length = 175
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 799 QASGCXGEAGGRRPLPRAGLSAHAASNGSRVSLSCK 692
QA+G G+ G +PLP+A +S +RV + C+
Sbjct: 48 QAAGEGGDFEGAKPLPKAEVSVICHDAKNRVMVRCR 83
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,787,838
Number of Sequences: 37544
Number of extensions: 416887
Number of successful extensions: 1725
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1725
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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