Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_L11
         (891 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052056-1|AAK93480.1| 1218|Drosophila melanogaster LP08452p pro...    38   0.025
AE014296-1730|AAN11956.2| 1218|Drosophila melanogaster CG32046-P...    38   0.025
AE014296-1729|AAF50210.2| 1392|Drosophila melanogaster CG32046-P...    38   0.025
AY084162-1|AAL89900.1|  331|Drosophila melanogaster RE37150p pro...    35   0.17 
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi...    30   4.9  
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA...    30   4.9  
BT011098-1|AAR82764.1|  357|Drosophila melanogaster RE25030p pro...    29   8.6  

>AY052056-1|AAK93480.1| 1218|Drosophila melanogaster LP08452p protein.
          Length = 1218

 Score = 37.5 bits (83), Expect = 0.025
 Identities = 15/28 (53%), Positives = 24/28 (85%)
 Frame = +3

Query: 636  SLLQDVVDIKTLLLQLKRVLQESETLDP 719
            +++QDV+  K  LL+L+R+LQE+ETL+P
Sbjct: 1071 AMIQDVLQFKKQLLRLRRILQETETLNP 1098


>AE014296-1730|AAN11956.2| 1218|Drosophila melanogaster CG32046-PB,
            isoform B protein.
          Length = 1218

 Score = 37.5 bits (83), Expect = 0.025
 Identities = 15/28 (53%), Positives = 24/28 (85%)
 Frame = +3

Query: 636  SLLQDVVDIKTLLLQLKRVLQESETLDP 719
            +++QDV+  K  LL+L+R+LQE+ETL+P
Sbjct: 1071 AMIQDVLQFKKQLLRLRRILQETETLNP 1098


>AE014296-1729|AAF50210.2| 1392|Drosophila melanogaster CG32046-PA,
            isoform A protein.
          Length = 1392

 Score = 37.5 bits (83), Expect = 0.025
 Identities = 15/28 (53%), Positives = 24/28 (85%)
 Frame = +3

Query: 636  SLLQDVVDIKTLLLQLKRVLQESETLDP 719
            +++QDV+  K  LL+L+R+LQE+ETL+P
Sbjct: 1071 AMIQDVLQFKKQLLRLRRILQETETLNP 1098


>AY084162-1|AAL89900.1|  331|Drosophila melanogaster RE37150p
           protein.
          Length = 331

 Score = 34.7 bits (76), Expect = 0.17
 Identities = 14/28 (50%), Positives = 23/28 (82%)
 Frame = +3

Query: 636 SLLQDVVDIKTLLLQLKRVLQESETLDP 719
           +++QDV+  K  LL+L+R+LQ +ETL+P
Sbjct: 10  AMIQDVLQFKKQLLRLRRILQVTETLNP 37


>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
            ubiquitin-conjugatingenzyme protein.
          Length = 4876

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 15/57 (26%), Positives = 30/57 (52%)
 Frame = +3

Query: 480  VKGIVAQVVTMLNGQAQRASLPVRTARLLQRSRTQTPSEGGVSDGNASPAPASLLQD 650
            + G   Q+V  L  + +  ++ VR+ + LQR  T +   GG+S G ++  P + + +
Sbjct: 3751 ISGFTRQMVLQLLLENEHITVSVRSQQPLQRRDTLSAVLGGISSGASTSLPVAAVNN 3807


>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
            protein.
          Length = 4876

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 15/57 (26%), Positives = 30/57 (52%)
 Frame = +3

Query: 480  VKGIVAQVVTMLNGQAQRASLPVRTARLLQRSRTQTPSEGGVSDGNASPAPASLLQD 650
            + G   Q+V  L  + +  ++ VR+ + LQR  T +   GG+S G ++  P + + +
Sbjct: 3751 ISGFTRQMVLQLLLENEHITVSVRSQQPLQRRDTLSAVLGGISSGASTSLPVAAVNN 3807


>BT011098-1|AAR82764.1|  357|Drosophila melanogaster RE25030p
           protein.
          Length = 357

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 22/69 (31%), Positives = 38/69 (55%)
 Frame = +3

Query: 393 FLDNSEVIVVVMTLAKMEKPSVVLEKEAPVKGIVAQVVTMLNGQAQRASLPVRTARLLQR 572
           F+D S  +  ++ L K  + +++L++E P + I     T  N  A++A +  R A L   
Sbjct: 5   FVDASGSLCFLVILFKSCRIAMILKEEHPHQSIE----TAANA-ARQAQVRWRMAHLKAL 59

Query: 573 SRTQTPSEG 599
           SRT+TP+ G
Sbjct: 60  SRTRTPAHG 68


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,374,595
Number of Sequences: 53049
Number of extensions: 681529
Number of successful extensions: 2279
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2278
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)