Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_L05
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr... 31 1.1
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 30 1.9
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 30 1.9
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 30 1.9
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 30 1.9
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 29 4.4
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 29 4.4
AL032626-3|CAA21540.1| 306|Caenorhabditis elegans Hypothetical ... 29 4.4
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z70718-8|CAA94675.2| 301|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 5.9
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 7.8
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 28 7.8
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 7.8
>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical
protein C09F9.2 protein.
Length = 1642
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 507 RCICKNGFVDCRSGAEECGQMDDCAVVMPREGCC 608
RCICK GFV + + C D C + E C
Sbjct: 360 RCICKEGFVRMANDEDVCVPFDFCDKTVENEETC 393
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +3
Query: 510 CICKNGFV--DCRSGAEECGQMDDCA 581
CICK+GF SG+E C +D+CA
Sbjct: 2291 CICKSGFRRNSTLSGSETCADIDECA 2316
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Frame = +3
Query: 471 DTRLEQDWSSCFRCICKNGFVDCRSGAEECG---QMDDCAVVMPREGCCTKCKGC--WYN 635
D ++ SSC C + + D +SG EC + D C P +KC+GC +
Sbjct: 1980 DAVTAKNCSSCECSQCGSQYCDNKSGGCECKINVEGDSCDRCKPDHWGFSKCQGCQGCHC 2039
Query: 636 GTEHASHTEWNDDGKVFRCEAGVITISRPEC 728
GT A +T+ N + C G + C
Sbjct: 2040 GTA-AFNTQCNVENGQCTCRPGATGMRCEHC 2069
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Frame = +3
Query: 471 DTRLEQDWSSCFRCICKNGFVDCRSGAEECG---QMDDCAVVMPREGCCTKCKGC--WYN 635
D ++ SSC C + + D +SG EC + D C P +KC+GC +
Sbjct: 1980 DAVTAKNCSSCECSQCGSQYCDNKSGGCECKINVEGDSCDRCKPDHWGFSKCQGCQGCHC 2039
Query: 636 GTEHASHTEWNDDGKVFRCEAGVITISRPEC 728
GT A +T+ N + C G + C
Sbjct: 2040 GTA-AFNTQCNVENGQCTCRPGATGMRCEHC 2069
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
Frame = +3
Query: 552 EECGQMDDCAVVMPR-EGCCTKCK------GCWYNGTEHASHTEWN--DDGKVFRCEAGV 704
E+ G +DD V EG C K GC +NG + + EWN D V+ C+ G
Sbjct: 200 EDFGTVDDAVVKCAMVEGKCVLRKAEVTELGCRHNGKVYRHNEEWNSEDGATVYACQFGK 259
Query: 705 I 707
+
Sbjct: 260 V 260
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Frame = +3
Query: 471 DTRLEQDWSSCFRCICKNGFVDCRSGAEECG---QMDDCAVVMPREGCCTKCKGC--WYN 635
D ++ SSC C + + D +SG EC + D C P +KC+GC +
Sbjct: 1980 DAVTAKNCSSCECSQCGSQYCDNKSGGCECKINVEGDSCDRCKPDHWGFSKCQGCQGCHC 2039
Query: 636 GTEHASHTEWNDDGKVFRCEAGVITISRPEC 728
GT A +T+ N + C G + C
Sbjct: 2040 GTA-AFNTQCNVENGQCTCRPGATGMRCEHC 2069
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Frame = +3
Query: 471 DTRLEQDWSSCFRCICKNGFVDCRSGAEECG---QMDDCAVVMPREGCCTKCKGC--WYN 635
D ++ SSC C + + D +SG EC + D C P +KC+GC +
Sbjct: 1980 DAVTAKNCSSCECSQCGSQYCDNKSGGCECKINVEGDSCDRCKPDHWGFSKCQGCQGCHC 2039
Query: 636 GTEHASHTEWNDDGKVFRCEAGVITISRPEC 728
GT A +T+ N + C G + C
Sbjct: 2040 GTA-AFNTQCNVENGQCTCRPGATGMRCEHC 2069
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +3
Query: 264 RGCDAREAEQRVPAP 308
RGC AR A QRVPAP
Sbjct: 191 RGCPARSAPQRVPAP 205
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +3
Query: 504 FRCICKNGFVD--CRSGAEECGQMDDCA 581
F+CIC NG+ C G + C Q ++CA
Sbjct: 138 FQCICNNGYGGSYCEEGIDHCAQ-NECA 164
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +3
Query: 504 FRCICKNGFVD--CRSGAEECGQMDDCA 581
F+CIC NG+ C G + C Q ++CA
Sbjct: 138 FQCICNNGYGGSYCEEGIDHCAQ-NECA 164
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +3
Query: 504 FRCICKNGFVD--CRSGAEECGQMDDCA 581
F+CIC NG+ C G + C Q ++CA
Sbjct: 138 FQCICNNGYGGSYCEEGIDHCAQ-NECA 164
>AL032626-3|CAA21540.1| 306|Caenorhabditis elegans Hypothetical
protein Y37D8A.3 protein.
Length = 306
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +3
Query: 510 CICKNGFVDCRSGAE---ECGQMDDCAVVMP-REGCCTKCKGCWYNGTEHASHTEWNDDG 677
C +N F D E E G+ +C ++ P + K GC + G ++++ W
Sbjct: 168 CYMQNSFSDLLMSGESRIENGKRHECEIIGPGKVRYVVKMLGCMHEGQQYSTGQMWTHQH 227
Query: 678 KVFRCE 695
++C+
Sbjct: 228 VRYQCK 233
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 669 DDGKVFRCEAGVITISRPECYAPCDRPKQQRHTHNNCPXL 788
D R + G++T P Y C+R Q H + NCP L
Sbjct: 136 DQSNFRRRQPGIMTGPPPPTYT-CNRCSQPGHWYKNCPML 174
>Z70718-8|CAA94675.2| 301|Caenorhabditis elegans Hypothetical
protein C04G2.10 protein.
Length = 301
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = -2
Query: 194 RSGKRNRLRDASQCICDVVPICRGRCVEMGTRSAMQASAGVGEAARALSQNLK 36
R G+ +L D S+C +++ + + + V T++ + +GE R ++ +K
Sbjct: 26 RIGREKKLADDSRCYGNILDLVKRKKVTNWTQTRLVVEGKLGEGLRGIAYKVK 78
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +3
Query: 483 EQDWSSCFRCICK----NGFVDCRSGAEECGQMDDCAVV 587
EQ + +CI K +G +DCR G++E G +CA+V
Sbjct: 996 EQFQCTSGKCIPKRRQCDGTLDCRDGSDEKGCKKECAIV 1034
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 504 FRCICKNGFVDCRSGAEECGQMDDCAVVMPREGCCTKCKGCW 629
F C C++GF +EC +D+CA C KG +
Sbjct: 4112 FYCHCRDGFRPDPQSPKECIDIDECAGNNTCTQLCLNTKGSY 4153
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 871 HXHDKHGSSGIRHPDLPIHXDH*SRTHHR 785
H +K S + HPD P H S HHR
Sbjct: 88 HHREKRHSEHLPHPDPPSHTAKRSTEHHR 116
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 504 FRCICKNGFVDCRSGAEECGQMDDCAVVMPREGCCTKCKGCW 629
F C C++GF +EC +D+CA C KG +
Sbjct: 4112 FYCHCRDGFRPDPQSPKECIDIDECAGNNTCTQLCLNTKGSY 4153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,810,067
Number of Sequences: 27780
Number of extensions: 481550
Number of successful extensions: 1620
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1619
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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