Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_L04
         (879 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.78 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.78 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   7.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.7  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -2

Query: 482 CTVSFTFILFECGSVQAKPASINLTLLNPFNLLRQRAKSSRD 357
           C V+   ++ +CG V+++   I L +L    L RQ      D
Sbjct: 299 CVVALIILILQCGRVRSEVVKI-LNVLKKIALRRQTTNGDLD 339


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -2

Query: 482 CTVSFTFILFECGSVQAKPASINLTLLNPFNLLRQRAKSSRD 357
           C V+   ++ +CG V+++   I L +L    L RQ      D
Sbjct: 225 CVVALIILILQCGRVRSEVVKI-LNVLKKIALRRQTTNGDLD 265


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 177 NIVLSVCCTYRSKPLKYVCSLFKGSCR 257
           ++V S  C+  S  L Y+C +    CR
Sbjct: 239 DLVNSFSCSCPSGTLGYICEINVDDCR 265


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 346 TQPTQRVVANIFHNPY 299
           T P   +  NI HNPY
Sbjct: 332 TSPNLPLTHNIAHNPY 347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,126
Number of Sequences: 336
Number of extensions: 4306
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)