Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_L04
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72516-2|CAA96689.2| 513|Caenorhabditis elegans Hypothetical pr... 280 8e-76
Z29094-6|CAD45581.1| 457|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z29094-5|CAA82336.1| 465|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z81125-4|CAB03383.3| 594|Caenorhabditis elegans Hypothetical pr... 29 5.8
U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha ... 29 5.8
AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta... 29 5.8
AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alph... 29 5.8
Z71180-7|CAK55177.1| 647|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical pr... 28 7.7
AL021475-8|CAK55192.1| 647|Caenorhabditis elegans Hypothetical ... 28 7.7
AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical ... 28 7.7
AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical ... 28 7.7
AL021475-3|CAI79247.1| 465|Caenorhabditis elegans Hypothetical ... 28 7.7
AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein. 28 7.7
>Z72516-2|CAA96689.2| 513|Caenorhabditis elegans Hypothetical
protein T25G3.3 protein.
Length = 513
Score = 280 bits (687), Expect = 8e-76
Identities = 122/235 (51%), Positives = 165/235 (70%), Gaps = 1/235 (0%)
Frame = +1
Query: 178 ILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCERYLQPPSEWVVCALE 357
I CC+C V IE NP+NMC CLR+ VDIT+GI +Q T++ C+ C+RY PPS W+ LE
Sbjct: 13 IACCECGVAIEPNPANMCSGCLRSRVDITEGITRQCTIYMCKFCDRYFVPPSAWMRAELE 72
Query: 358 SREXXXXXXXXXXXX-SRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGGAVLQQTFIVEF 534
S+E ++V+L DA F WTE HSKRIKVK+T+Q EV +LQQ +VEF
Sbjct: 73 SKELLSICLKKLKPMLTKVRLTDACFVWTEAHSKRIKVKITIQKEVFTNTILQQAVVVEF 132
Query: 535 TIQHQMCDACHRSEAQDYWRALVQVRQRANNRKTFYYLEQLILKHKAHENTLGIKPKHDG 714
T+ Q+CD C R+EA+D+WRA VQVRQRA +KT +YLEQL+LKH AH+ G+KP G
Sbjct: 133 TVHSQLCDDCRRAEAKDFWRACVQVRQRAEFKKTLFYLEQLLLKHSAHKECTGVKPVPTG 192
Query: 715 LDFFYSTENHARKMVDFIQSVLPIKCQHSKKLISHDIHSNIYNYXFTFSVEIVPL 879
+DF+++ + ARK VDF+ +VLP K ++++L+SHD +N Y+Y TF VEIVP+
Sbjct: 193 IDFYFAKQQEARKFVDFLMTVLPCKYHYAQELVSHDTKNNTYDYKHTFCVEIVPI 247
>Z29094-6|CAD45581.1| 457|Caenorhabditis elegans Hypothetical
protein C07A9.7b protein.
Length = 457
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +1
Query: 178 ILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCERYLQP 327
++C + + + +P N C CL+ I + A+ +C+ CE + +P
Sbjct: 43 VVCVETGITVNVDPQN-CYRCLK--------ITENASFAYCKNCEEFYEP 83
>Z29094-5|CAA82336.1| 465|Caenorhabditis elegans Hypothetical
protein C07A9.7a protein.
Length = 465
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +1
Query: 178 ILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCERYLQP 327
++C + + + +P N C CL+ I + A+ +C+ CE + +P
Sbjct: 43 VVCVETGITVNVDPQN-CYRCLK--------ITENASFAYCKNCEEFYEP 83
>Z81125-4|CAB03383.3| 594|Caenorhabditis elegans Hypothetical
protein T22A3.6 protein.
Length = 594
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +1
Query: 694 IKPKHDGLDFFYSTENHARKMVDFIQSVLPIKCQHSKKLISHDIHSNIYNYXFTFSVEI 870
IK K D +D N R+ DF ++V K QH K I + IYNY T + I
Sbjct: 48 IKEKLDEIDAQEMEAN--REYDDFRRNVTFAKRQHKKNGIIRALGHKIYNYGITILIFI 104
>U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha
family protein 2 protein.
Length = 531
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = -3
Query: 292 IMSLVWVFHL*CLHE----PLNKLHTYLRGLLL*VQHTDSTIFVYCCLKKRFL 146
+ ++ W F C H+ PL L +GL+ VQHTD + C +L
Sbjct: 236 VRTIAWAFSNMCRHKNPHAPLEVLRVLSKGLVKLVQHTDRQVRQDACWAVSYL 288
>AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta
binding domain proteinprotein.
Length = 531
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = -3
Query: 292 IMSLVWVFHL*CLHE----PLNKLHTYLRGLLL*VQHTDSTIFVYCCLKKRFL 146
+ ++ W F C H+ PL L +GL+ VQHTD + C +L
Sbjct: 236 VRTIAWAFSNMCRHKNPHAPLEVLRVLSKGLVKLVQHTDRQVRQDACWAVSYL 288
>AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alpha 2
protein.
Length = 531
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = -3
Query: 292 IMSLVWVFHL*CLHE----PLNKLHTYLRGLLL*VQHTDSTIFVYCCLKKRFL 146
+ ++ W F C H+ PL L +GL+ VQHTD + C +L
Sbjct: 236 VRTIAWAFSNMCRHKNPHAPLEVLRVLSKGLVKLVQHTDRQVRQDACWAVSYL 288
>Z71180-7|CAK55177.1| 647|Caenorhabditis elegans Hypothetical
protein F22E12.4e protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 583 DYWRALVQVRQRANNRKTFYYLEQLILKHKAHENTLGIKPKH----DGLDFFYSTENHAR 750
D+++ + +R R F + + KHK + I+ H DG D R
Sbjct: 310 DHYKFTAKEIERLYERGLFSPGQLMEAKHKDEFHIKDIRSDHIYWYDGYDGRAKDAATVR 369
Query: 751 KMVDFIQSVLPIKCQHSKKLISHDI 825
++ I SV+ QH KK I HDI
Sbjct: 370 LLISMIDSVI----QHFKKRIDHDI 390
>Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 583 DYWRALVQVRQRANNRKTFYYLEQLILKHKAHENTLGIKPKH----DGLDFFYSTENHAR 750
D+++ + +R R F + + KHK + I+ H DG D R
Sbjct: 386 DHYKFTAKEIERLYERGLFSPGQLMEAKHKDEFHIKDIRSDHIYWYDGYDGRAKDAATVR 445
Query: 751 KMVDFIQSVLPIKCQHSKKLISHDI 825
++ I SV+ QH KK I HDI
Sbjct: 446 LLISMIDSVI----QHFKKRIDHDI 466
>Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 583 DYWRALVQVRQRANNRKTFYYLEQLILKHKAHENTLGIKPKH----DGLDFFYSTENHAR 750
D+++ + +R R F + + KHK + I+ H DG D R
Sbjct: 386 DHYKFTAKEIERLYERGLFSPGQLMEAKHKDEFHIKDIRSDHIYWYDGYDGRAKDAATVR 445
Query: 751 KMVDFIQSVLPIKCQHSKKLISHDI 825
++ I SV+ QH KK I HDI
Sbjct: 446 LLISMIDSVI----QHFKKRIDHDI 466
>AL021475-8|CAK55192.1| 647|Caenorhabditis elegans Hypothetical
protein F22E12.4e protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 583 DYWRALVQVRQRANNRKTFYYLEQLILKHKAHENTLGIKPKH----DGLDFFYSTENHAR 750
D+++ + +R R F + + KHK + I+ H DG D R
Sbjct: 310 DHYKFTAKEIERLYERGLFSPGQLMEAKHKDEFHIKDIRSDHIYWYDGYDGRAKDAATVR 369
Query: 751 KMVDFIQSVLPIKCQHSKKLISHDI 825
++ I SV+ QH KK I HDI
Sbjct: 370 LLISMIDSVI----QHFKKRIDHDI 390
>AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 583 DYWRALVQVRQRANNRKTFYYLEQLILKHKAHENTLGIKPKH----DGLDFFYSTENHAR 750
D+++ + +R R F + + KHK + I+ H DG D R
Sbjct: 386 DHYKFTAKEIERLYERGLFSPGQLMEAKHKDEFHIKDIRSDHIYWYDGYDGRAKDAATVR 445
Query: 751 KMVDFIQSVLPIKCQHSKKLISHDI 825
++ I SV+ QH KK I HDI
Sbjct: 446 LLISMIDSVI----QHFKKRIDHDI 466
>AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 583 DYWRALVQVRQRANNRKTFYYLEQLILKHKAHENTLGIKPKH----DGLDFFYSTENHAR 750
D+++ + +R R F + + KHK + I+ H DG D R
Sbjct: 386 DHYKFTAKEIERLYERGLFSPGQLMEAKHKDEFHIKDIRSDHIYWYDGYDGRAKDAATVR 445
Query: 751 KMVDFIQSVLPIKCQHSKKLISHDI 825
++ I SV+ QH KK I HDI
Sbjct: 446 LLISMIDSVI----QHFKKRIDHDI 466
>AL021475-3|CAI79247.1| 465|Caenorhabditis elegans Hypothetical
protein F22E12.4c protein.
Length = 465
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 583 DYWRALVQVRQRANNRKTFYYLEQLILKHKAHENTLGIKPKH----DGLDFFYSTENHAR 750
D+++ + +R R F + + KHK + I+ H DG D R
Sbjct: 128 DHYKFTAKEIERLYERGLFSPGQLMEAKHKDEFHIKDIRSDHIYWYDGYDGRAKDAATVR 187
Query: 751 KMVDFIQSVLPIKCQHSKKLISHDI 825
++ I SV+ QH KK I HDI
Sbjct: 188 LLISMIDSVI----QHFKKRIDHDI 208
>AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein.
Length = 723
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 583 DYWRALVQVRQRANNRKTFYYLEQLILKHKAHENTLGIKPKH----DGLDFFYSTENHAR 750
D+++ + +R R F + + KHK + I+ H DG D R
Sbjct: 386 DHYKFTAKEIERLYERGLFSPGQLMEAKHKDEFHIKDIRSDHIYWYDGYDGRAKDAATVR 445
Query: 751 KMVDFIQSVLPIKCQHSKKLISHDI 825
++ I SV+ QH KK I HDI
Sbjct: 446 LLISMIDSVI----QHFKKRIDHDI 466
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,339,611
Number of Sequences: 27780
Number of extensions: 403419
Number of successful extensions: 892
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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