Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_L03
(928 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 34 0.18
07_03_1136 + 24218601-24218734,24218769-24219906 33 0.43
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 32 0.74
07_01_0479 + 3606663-3607448 31 0.98
02_04_0400 - 22608519-22608844,22609044-22609122 31 0.98
07_01_0080 + 587674-588510 31 1.3
03_01_0515 - 3864796-3865425 30 3.0
02_05_0686 - 30900748-30902167,30903442-30904742 30 3.0
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 30 3.0
12_02_1174 - 26696869-26698191 29 5.2
02_04_0396 - 22591963-22592150,22592571-22592649 29 5.2
01_01_0715 - 5542648-5543219,5543352-5543544 29 6.9
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 9.2
07_03_0890 - 22332768-22333382 28 9.2
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 9.2
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.9 bits (74), Expect = 0.18
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 4/63 (6%)
Frame = -3
Query: 623 PXPPXGGGGXXPKXXXPPXXXGFSXXXPPPXXXXXGXXKXXXPXQ----GXPRPXXGGXX 456
P PP GG G PP G PPP G P G P P G
Sbjct: 1123 PPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGV 1182
Query: 455 XPP 447
PP
Sbjct: 1183 APP 1185
Score = 33.1 bits (72), Expect = 0.32
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 2/79 (2%)
Frame = +2
Query: 464 PXXXGGGPPGXXXXLFXXPPXXXXEGXXXGKTPXXXGGXXXXGXXPPPPXGGXXXXXXXP 643
P GG PP PP G TP PPP G P
Sbjct: 1142 PEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTP 1201
Query: 644 PXXXXP--XPXXXXXPPPP 694
P P P PPPP
Sbjct: 1202 PGAPAPPMPPGVPGGPPPP 1220
Score = 32.7 bits (71), Expect = 0.43
Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 6/76 (7%)
Frame = -2
Query: 645 GGXXXXXXXPPXGGGGXXPXXXXPPXXXGVFPXXXPSXXXXGGXXKXXXXXP------GG 484
GG PP GG G PP G+ P GG P G
Sbjct: 1116 GGITGVPPPPPIGGLGGHQAPPAPPLPEGI--GGVPPPPPVGGLGGPPAPPPPAGFRGGT 1173
Query: 483 PPPXFXGAXXPPPXXP 436
PPP G PPP P
Sbjct: 1174 PPPNAHGGVAPPPPPP 1189
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/69 (33%), Positives = 23/69 (33%)
Frame = -1
Query: 622 PPPXGGGGXXPXXXXXPPXXGGFPXXXPLXXXXXXXXKKXXXPXRGXPAPXXGGXXXPPX 443
PPP GG G P PP GF P P RG GG PP
Sbjct: 1151 PPPVGGLGGPPA----PPPPAGFRGGTP-PPNAHGGVAPPPPPPRGHGG--VGGPPTPPG 1203
Query: 442 XPXXXXPPG 416
P PPG
Sbjct: 1204 APAPPMPPG 1212
Score = 28.7 bits (61), Expect = 6.9
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -2
Query: 618 PPXGGGGXXPXXXXPPXXXGVFPXXXPSXXXXGGXXKXXXXXPGGPPPXFXGAXXPPP 445
PP GG P P GV P PGGPPP G P P
Sbjct: 1175 PPNAHGGVAPPPPPPRGHGGV---GGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAP 1229
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +3
Query: 552 GKPPXXGGXXXFXGXXPPPPXGGGXXXXXXPXXXXXPXPXXXXXXPPP 695
G PP G PPPP GG P P P PPP
Sbjct: 1107 GAPPPPPPPGGITGVPPPPPIGGLGGHQAPP---APPLPEGIGGVPPP 1151
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 32.7 bits (71), Expect = 0.43
Identities = 25/81 (30%), Positives = 25/81 (30%), Gaps = 6/81 (7%)
Frame = +2
Query: 422 GXXXXGXXGGGXXAPXXXGGG------PPGXXXXLFXXPPXXXXEGXXXGKTPXXXGGXX 583
G G GGG P GGG PPG PP G G GG
Sbjct: 94 GGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGG-GGGGGAPRRVLGGGG 152
Query: 584 XXGXXPPPPXGGXXXXXXXPP 646
G PP GG PP
Sbjct: 153 GGGALARPPGGGRGGALGRPP 173
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.9 bits (69), Expect = 0.74
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 599 PPPPXGGXXXXXXXPPXXXXPXPXXXXXPPPP 694
PPPP G PP P P PPPP
Sbjct: 94 PPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPP 125
Score = 29.9 bits (64), Expect = 3.0
Identities = 22/77 (28%), Positives = 23/77 (29%)
Frame = +2
Query: 464 PXXXGGGPPGXXXXLFXXPPXXXXEGXXXGKTPXXXGGXXXXGXXPPPPXGGXXXXXXXP 643
P GG PP PP + G P G PPPP G P
Sbjct: 12 PPPQGGFPPQPPPMNPYGPPPP--QQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQ-P 68
Query: 644 PXXXXPXPXXXXXPPPP 694
P P PPPP
Sbjct: 69 QFNFGPGPPQQQQPPPP 85
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 599 PPPPXGGXXXXXXXPPXXXXPXPXXXXXPPPP 694
PPPP G PP P PPPP
Sbjct: 95 PPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPP 126
>07_01_0479 + 3606663-3607448
Length = 261
Score = 31.5 bits (68), Expect = 0.98
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -2
Query: 576 PPXXXGVFPXXXPSXXXXGGXXKXXXXXPGGPPPXFXGAXXPPPXXPXFXXP 421
PP G F P G + PGGPPP PPP P P
Sbjct: 201 PPPPPGPFMRGPPPM----GPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPP 248
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -2
Query: 618 PPXGGGGXXPXXXXPPXXXGVFPXXXPSXXXXGGXXKXXXXXPGGPPPXFXGAXXPPPXX 439
PP GG P P G P P PG PPP F PPP
Sbjct: 194 PPAFPGGPPPPPG--PFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPPPG 251
Query: 438 P 436
P
Sbjct: 252 P 252
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 31.5 bits (68), Expect = 0.98
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -2
Query: 693 GGGGXXXXXGXGXXXXGGXXXXXXXPPXGGGGXXPXXXXPPXXXGVFP 550
GGGG G G GG GGGG PP G +P
Sbjct: 56 GGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPPWNGGYYP 103
>07_01_0080 + 587674-588510
Length = 278
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +2
Query: 536 EGXXXGKTPXXXGGXXXXGXXPPPPXGGXXXXXXXPPXXXXPXPXXXXXPPPP 694
+G TP GG PPPP PP P P PPPP
Sbjct: 71 QGAASTSTPPRLGGDGMFRRPPPPPPPPPSSGSPPPPPP--PPPPPPPPPPPP 121
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 599 PPPPXGGXXXXXXXPPXXXXPXPXXXXXPPPP 694
PPPP G PP P PPPP
Sbjct: 61 PPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPP 92
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 599 PPPPXGGXXXXXXXPPXXXXPXPXXXXXPPPP 694
PPPP PP P P PPPP
Sbjct: 72 PPPPPPSVTSSPPPPPLPPPPPPPAASPPPPP 103
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 599 PPPPXGGXXXXXXXPPXXXXPXPXXXXXPPPP 694
PPPP PP P P PPPP
Sbjct: 71 PPPPPPPSVTSSPPPPPLPPPPPPPAASPPPP 102
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 599 PPPPXGGXXXXXXXPPXXXXPXPXXXXXPPPP 694
PPPP PP P P PPPP
Sbjct: 89 PPPPPPPAASPPPPPPSPPPPSPVKSSPPPPP 120
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 599 PPPPXGGXXXXXXXPPXXXXPXPXXXXXPPPP 694
PPPP PP P P PPPP
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPP 347
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 599 PPPPXGGXXXXXXXPPXXXXPXPXXXXXPPPP 694
PPPP PP P P PPPP
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPP 357
Score = 28.3 bits (60), Expect = 9.2
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -3
Query: 623 PXPPXGGGGXXPKXXXPPXXXGFSXXXPPPXXXXXGXXKXXXPXQGXPRPXXGGXXXPPX 444
P PP G P PP PPP G K P P P GG PP
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG--KKGGP---PPPPPKGGASRPPA 391
Query: 443 A 441
A
Sbjct: 392 A 392
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 599 PPPPXGGXXXXXXXPPXXXXPXPXXXXXPPPP 694
PPPP PP P P PPPP
Sbjct: 418 PPPPLPSDAFEQPPPPPEHPPPPESTSPPPPP 449
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 599 PPPPXGGXXXXXXXPPXXXXPXPXXXXXPPPP 694
PPPP PP P P PPPP
Sbjct: 274 PPPPEDYWSPTAVTPPEPTKPKPPPPSPPPPP 305
>02_04_0396 - 22591963-22592150,22592571-22592649
Length = 88
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 610 GGGGXXPXXXXXPPXXGGFPXXXP 539
GGGG P PP GG+P P
Sbjct: 37 GGGGGPPGYGHYPPWNGGYPGRDP 60
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = +2
Query: 599 PPPPXGGXXXXXXXP-PXXXXPXPXXXXXPPPP 694
PPPP G P P P P PPPP
Sbjct: 161 PPPPAAGTNGTARAPSPPVPAPAPAGSPPPPPP 193
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 599 PPPPXGGXXXXXXXPPXXXXPXPXXXXXPPPP 694
PPP G PP P P PPPP
Sbjct: 752 PPPLMTGKKAPAPPPPPPQAPKPPGTVPPPPP 783
>07_03_0890 - 22332768-22333382
Length = 204
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +2
Query: 590 GXXPPPPXGGXXXXXXXPPXXXXPXPXXXXXPPPP 694
G PPPP PP P PPPP
Sbjct: 73 GSPPPPPAEATPPPPPPPPPPERAVPEAADTPPPP 107
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 590 GXXPPPPXGGXXXXXXXPPXXXXPXPXXXXXPPP 691
G PPPP G PP P PPP
Sbjct: 367 GPGPPPPPGAAGRGGGGPPPPALPGGPRARGPPP 400
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,314,344
Number of Sequences: 37544
Number of extensions: 333288
Number of successful extensions: 1445
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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