Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_L02
(860 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 33 0.23
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 32 0.52
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 31 1.2
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 31 1.2
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 31 1.2
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 31 1.2
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 30 2.1
SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53) 30 2.1
SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 30 2.1
SB_11994| Best HMM Match : ERM (HMM E-Value=0.28) 30 2.1
SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 30 2.1
SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6) 30 2.1
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 30 2.1
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 30 2.1
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 30 2.1
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 30 2.1
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 30 2.1
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 29 6.4
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 6.4
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 6.4
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 28 8.5
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 33.5 bits (73), Expect = 0.23
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXGG 728
PPPPP PPPPP GG
Sbjct: 653 PPPPPGGGMFPPPPPPPPGGG 673
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 32.3 bits (70), Expect = 0.52
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 586 GGXXXSPPPXXGGGXXYXXXXXXXXXXPPPPPXXXXPPP 702
GG PPP G PPPPP PPP
Sbjct: 287 GGAPVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPP 325
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXGG 728
PPPPP P PPP GG
Sbjct: 292 PPPPPADGSAPAPPPPPPPGG 312
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 304 PPPPPPPGGAPPPPP 318
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 305 PPPPPPGGAPPPPPP 319
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 306 PPPPPGGAPPPPPPP 320
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 321 PPPPPGDGGAPPPPP 335
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXGGG 731
PPPP PPPPP G G
Sbjct: 307 PPPPGGAPPPPPPPPPPPPGDG 328
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 31.5 bits (68), Expect = 0.91
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 586 GGXXXSPPPXXGGGXXYXXXXXXXXXXPPPPPXXXXPPP 702
GG PPP GG PPPPP PP
Sbjct: 927 GGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPP 965
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 586 GGXXXSPPPXXGGGXXYXXXXXXXXXXPPPPPXXXXPPP 702
G PPP G PPPPP PPP
Sbjct: 928 GNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPP 966
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
Frame = +1
Query: 586 GGXXXSPPPXXGGGXXYXXXXXXXXXXPP----PPPXXXXPPPXP 708
GG PPP GG PP PPP PPP P
Sbjct: 949 GGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPPP 993
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 601 SPPPXXGGGXXYXXXXXXXXXXPPPPPXXXXPPP 702
+PPP GGG PPPPP PPP
Sbjct: 963 APPP--GGGAPPLPPPPGGSAPPPPPPPPPPPPP 994
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 586 GGXXXSPPPXXGGGXXYXXXXXXXXXXPPPPPXXXXPPPXP 708
GG PPP GG PPP PP P
Sbjct: 916 GGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPP 956
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 601 SPPPXXGGGXXYXXXXXXXXXXPPPPPXXXXPPPXP 708
S PP GG PPPPP PPP P
Sbjct: 962 SAPPPGGGAPPLPPPPGGSAPPPPPPPP---PPPPP 994
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXG 725
PPPPP PPPPP G
Sbjct: 871 PPPPPPPPPPPPPPPASSTG 890
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 867 PPPPPPPPPPPPPPP 881
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 868 PPPPPPPPPPPPPPP 882
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 869 PPPPPPPPPPPPPPP 883
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 870 PPPPPPPPPPPPPPP 884
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXG 725
PPPPP PPPPP G
Sbjct: 716 PPPPPGCAGLPPPPPSPQPG 735
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 744 PPPPPGCAGLPPPPP 758
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXG 725
PPPPP PPPPP G
Sbjct: 196 PPPPPGPGGIPPPPPPIRGG 215
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXGGG 731
PPPPP PPPPP GGG
Sbjct: 207 PPPPPIRGGVPPPPP---MGGG 225
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXG 725
PPPPP PPPPP G
Sbjct: 690 PPPPPIGGGAPPPPPPGFGG 709
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXGG 728
PPPPP PPPP GG
Sbjct: 678 PPPPPLPGGAAPPPPPPIGGG 698
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXGG 728
PPPPP PPPP GG
Sbjct: 689 PPPPPPIGGGAPPPPPPGFGG 709
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXGGG 731
PPPPP PPP GGG
Sbjct: 677 PPPPPPLPGGAAPPPPPPIGGG 698
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +1
Query: 535 PPKXXXPPXXRGXFFXXGGXXXSPPPXXGGGXXYXXXXXXXXXXPPPPP 681
PP PP + GG PPP GG PPPPP
Sbjct: 661 PPPPPPPPGGQA-----GGAPPPPPPPLPGGAAPPPPPPIGGGAPPPPP 704
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
Frame = +3
Query: 666 PPPPPXXXXX--PPPPPXXXXGG 728
PPPPP PPPPP GG
Sbjct: 664 PPPPPGGQAGGAPPPPPPPLPGG 686
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXG 725
PPPPP PPPPP G
Sbjct: 364 PPPPPPPVGGPPPPPPPIEG 383
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 305 PPPPPSRGSAPPPPP 319
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 668 PPPPPXXXXPPPXPXXXG 721
PPPPP PPP P G
Sbjct: 394 PPPPPGRGAPPPGPMIPG 411
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXG 725
PPPPP PPPPP G
Sbjct: 374 PPPPPPPTNGPPPPPPPTNG 393
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXG 725
PPPPP PPPPP G
Sbjct: 384 PPPPPPPTNGPPPPPPPTNG 403
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXG 725
PPPPP PPPPP G
Sbjct: 394 PPPPPPPTNGPPPPPPPTNG 413
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 365 PPPPPPTNKPPPPPP 379
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 366 PPPPPTNKPPPPPPP 380
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 668 PPPPPXXXXPPPXPXXXGG 724
PPPPP PPP P G
Sbjct: 365 PPPPPPTNKPPPPPPPTNG 383
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 683 PPPPPPPPPPPPPPP 697
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 684 PPPPPPPPPPPPPPP 698
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 685 PPPPPPPPPPPPPPP 699
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 686 PPPPPPPPPPPPPPP 700
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 687 PPPPPPPPPPPPPPP 701
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 696 PPPPPPQPSTPPPPP 710
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 697 PPPPPQPSTPPPPPP 711
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 464 PPPPPPPPPPPPPPP 478
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 465 PPPPPPPPPPPPPPP 479
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 466 PPPPPPPPPPPPPPP 480
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 467 PPPPPPPPPPPPPPP 481
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 468 PPPPPPPPPPPPPPP 482
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 469 PPPPPPPPPPPPPPP 483
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 470 PPPPPPPPPPPPPPP 484
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 471 PPPPPPPPPPPPPPP 485
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 472 PPPPPPPPPPPPPPP 486
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 473 PPPPPPPPPPPPPPP 487
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 479 PPPPPPPPPFPPPPP 493
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 480 PPPPPPPPFPPPPPP 494
>SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53)
Length = 264
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 79 PPPPPPPPPPPPPPP 93
>SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 54 PPPPPPPPPPPPPPP 68
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 55 PPPPPPPPPPPPPPP 69
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 56 PPPPPPPPPPPPPPP 70
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 57 PPPPPPPPPPPPPPP 71
>SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 276
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 69 PPPPPPPPPLPPPPP 83
>SB_11994| Best HMM Match : ERM (HMM E-Value=0.28)
Length = 465
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 280 PPPPPPPPPPPPPPP 294
>SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 500
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 293 PPPPPPPPPLPPPPP 307
>SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6)
Length = 479
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 424 PPPPPPPAPLPPPPP 438
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 425 PPPPPPAPLPPPPPP 439
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 426 PPPPPAPLPPPPPPP 440
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 1163 PPPPPPSSPSPPPPP 1177
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 1164 PPPPPSSPSPPPPPP 1178
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 102 PPPPPPPPPPPPPPP 116
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 103 PPPPPPPPPPPPPPP 117
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 104 PPPPPPPPPPPPPPP 118
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 105 PPPPPPPPPPPPPPP 119
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 106 PPPPPPPPPPPPPPP 120
>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 233 PPPPPAAAPPPPPPP 247
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 1311 PPPPPPPPPPPPPPP 1325
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 301 PPPPPPTDFAPPPPP 315
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 302 PPPPPTDFAPPPPPP 316
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 368 PPPPPPPPPSPPPPP 382
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 369 PPPPPPPPSPPPPPP 383
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 370 PPPPPPPSPPPPPPP 384
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 371 PPPPPPSPPPPPPPP 385
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 372 PPPPPSPPPPPPPPP 386
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 379 PPPPPPPPPSPPPPP 393
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 389 PPPPPQPPPPPPPPP 403
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 395 PPPPPPPPPPPPPPP 409
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 396 PPPPPPPPPPPPPPP 410
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 397 PPPPPPPPPPPPPPP 411
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 398 PPPPPPPPPPPPPPP 412
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 399 PPPPPPPPPPPPPPP 413
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 400 PPPPPPPPPPPPPPP 414
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 401 PPPPPPPPPPPPPPP 415
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 402 PPPPPPPPPPPPPPP 416
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 403 PPPPPPPPPPPPPPP 417
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 404 PPPPPPPPPPPPPPP 418
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 410 PPPPPPPPPAPPPPP 424
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 411 PPPPPPPPAPPPPPP 425
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 412 PPPPPPPAPPPPPPP 426
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 413 PPPPPPAPPPPPPPP 427
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 414 PPPPPAPPPPPPPPP 428
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 205 PPPPPRPPPSPPPPP 219
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 195 PPPPPPPPPPPPPPP 209
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 669 PPPPXXXXXPPPPPXXXXGGG 731
PPPP PPPP GGG
Sbjct: 579 PPPPGAGQEGPPPPGAGQGGG 599
Score = 28.7 bits (61), Expect = 6.4
Identities = 25/98 (25%), Positives = 26/98 (26%), Gaps = 4/98 (4%)
Frame = -3
Query: 723 PPXXXGXGGGXXXXGGGGGXXXXXXXXXXIXXXXP--XXXGGXXXXXXPXKKXXPXXGGX 550
PP G GGG G G G P GG + P G
Sbjct: 493 PPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGA 552
Query: 549 XXFWGGXK--XXXXXXPPXXGKKXXGXPKXGGGFXXPP 442
WG PP G G P G G PP
Sbjct: 553 GQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPP 590
Score = 28.7 bits (61), Expect = 6.4
Identities = 26/101 (25%), Positives = 32/101 (31%), Gaps = 6/101 (5%)
Frame = -1
Query: 725 PXXXXXGXGGGXXXXGGGGGXXXXXXXXXKXXXPPPXXGGGEXXXPP---XXKKXPRXXG 555
P G GGG G G G + PPP G G+ PP + +
Sbjct: 503 PPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPP-PGAGQGGGPPPPGAGQGWGQPPP 561
Query: 554 GXXXFGG---XXKXXXXXXPRGXGKKXXXXXKXGGGFXPPP 441
G GG P G G++ G G PPP
Sbjct: 562 GAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAGQGGGPPP 602
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = +1
Query: 526 FXXPPKXXXPPXXRGXFFXXGGXXXSPPPXXGGGXXYXXXXXXXXXXPPPPPXXXXPPPX 705
+ PP PP + PPP Y PPPP PPP
Sbjct: 124 YPPPPNPPYPPPPNAPYPPSPNAPYPPPP----NPPYPPPLYPPPPNPPPPNAPYPPPPY 179
Query: 706 P 708
P
Sbjct: 180 P 180
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 668 PPPPPXXXXPPPXPXXXG 721
PPPPP PPP P G
Sbjct: 29 PPPPPPYEAPPPPPGPPG 46
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 606 PPXXXGXXXXFXXXXXXXXXPPPPPXXXXXPPPPPXXXXGG 728
PP G F PPPPP PPP G
Sbjct: 174 PPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSG 214
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = +1
Query: 535 PPKXXXPPXXRGXFFXXGGXXXSPPPXXGGGXXYXXXXXXXXXXPPPPPXXXXPPP 702
PPK PP G +PPP GG PPPPP PPP
Sbjct: 134 PPKNSSPPPPFG----------APPPPDRGGQL--AKKPSQGSFPPPPPMGKPPPP 177
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 606 PPXXXGXXXXFXXXXXXXXXPPPPPXXXXXPPPPPXXXXGG 728
PP G F PPPPP PPP G
Sbjct: 86 PPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSG 126
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXGGGXXXK 743
PPP P PPPPP GG K
Sbjct: 305 PPPLPAGVPAPPPPPPPPMLGGPKIK 330
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -1
Query: 707 GXGGGXXXXGGGGGXXXXXXXXXKXXXPPP 618
G GGG GGGGG + PPP
Sbjct: 346 GGGGGGGGGGGGGGRGGGGGFSSRGRGPPP 375
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,966,067
Number of Sequences: 59808
Number of extensions: 245848
Number of successful extensions: 3995
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1691
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2455286845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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