Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_L02
(860 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 36 0.028
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.11
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.11
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.11
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.60
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 31 0.80
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 1.8
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 30 1.8
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 30 1.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 1.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 1.8
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 30 1.8
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 1.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 1.8
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 1.8
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 1.8
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 1.8
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 30 1.8
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 1.8
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 1.8
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 30 1.8
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical p... 28 7.4
Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical p... 28 7.4
Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical p... 28 7.4
Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical p... 28 7.4
Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical p... 28 7.4
Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical p... 28 7.4
Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 28 7.4
AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal gro... 28 7.4
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 28 7.4
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 36.3 bits (80), Expect = 0.028
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -1
Query: 725 PXXXXXGXGGGXXXXGGGGGXXXXXXXXXKXXXPPPXXGGGEXXXP 588
P G GGG GGGGG + PPP GGG P
Sbjct: 181 PPSNDFGPGGGGGGMGGGGGSGGSGGGSGRFPPPPPPYGGGGRRRP 226
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -3
Query: 726 PPPXXXGXGGGXXXXGGGGGXXXXXXXXXXIXXXXPXXXGG 604
PP G GGG GGGGG P GG
Sbjct: 181 PPSNDFGPGGGGGGMGGGGGSGGSGGGSGRFPPPPPPYGGG 221
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.11
Identities = 32/111 (28%), Positives = 32/111 (28%)
Frame = +3
Query: 396 PPPXKXFXXGXXXXCGGGXKTPPXFXGXXXFFSPXXGXXXXXXFXXPPKXXXPPXGXGXF 575
PPP K GG PP G P G PP PP G
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPP----PPPGLPPITGGPPPP----PPPGGLPP 737
Query: 576 FXXGXXXXFXPPXXXGXXXXFXXXXXXXXXPPPPPXXXXXPPPPPXXXXGG 728
G PP G PPPPP PPPPP GG
Sbjct: 738 ITGGPP----PPPPPGGLPPISGGP-----PPPPPPPGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.11
Identities = 32/111 (28%), Positives = 32/111 (28%)
Frame = +3
Query: 396 PPPXKXFXXGXXXXCGGGXKTPPXFXGXXXFFSPXXGXXXXXXFXXPPKXXXPPXGXGXF 575
PPP K GG PP G P G PP PP G
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPP----PPPGLPPITGGPPPP----PPPGGLPP 737
Query: 576 FXXGXXXXFXPPXXXGXXXXFXXXXXXXXXPPPPPXXXXXPPPPPXXXXGG 728
G PP G PPPPP PPPPP GG
Sbjct: 738 ITGGPP----PPPPPGGLPPISGGP-----PPPPPPPGGCPPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.11
Identities = 32/111 (28%), Positives = 32/111 (28%)
Frame = +3
Query: 396 PPPXKXFXXGXXXXCGGGXKTPPXFXGXXXFFSPXXGXXXXXXFXXPPKXXXPPXGXGXF 575
PPP K GG PP G P G PP PP G
Sbjct: 269 PPPTKMNLSAPSTSAGGSSALPPITGGPP----PPPGLPPITGGPPPP----PPPGGLPP 320
Query: 576 FXXGXXXXFXPPXXXGXXXXFXXXXXXXXXPPPPPXXXXXPPPPPXXXXGG 728
G PP G PPPPP PPPPP GG
Sbjct: 321 ITGGPP----PPPPPGGLPPISGGP-----PPPPPPPGGCPPPPPPPPPGG 362
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 606 PPXXXGXXXXFXXXXXXXXXPPPPPXXXXXPPPPP 710
PP G PPPPP PPPPP
Sbjct: 44 PPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPP 78
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 606 PPXXXGXXXXFXXXXXXXXXPPPPPXXXXXPPPPP 710
PP G PPPPP PPPPP
Sbjct: 107 PPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 141
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 606 PPXXXGXXXXFXXXXXXXXXPPPPPXXXXXPPPPP 710
PP G PPPPP PPPPP
Sbjct: 138 PPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 172
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 606 PPXXXGXXXXFXXXXXXXXXPPPPPXXXXXPPPPP 710
PP G PPPPP PPPPP
Sbjct: 169 PPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPP 203
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 33 PPPPPKGTGTPPPPP 47
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 96 PPPPPKGTGTPPPPP 110
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 251 PPPPPKGTGSPPPPP 265
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 606 PPXXXGXXXXFXXXXXXXXXPPPPPXXXXXPPPP 707
PP G PPPPP PPPP
Sbjct: 262 PPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPP 295
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 606 PPXXXGXXXXFXXXXXXXXXPPPPPXXXXXPPPPP 710
PP G PPPPP P PPP
Sbjct: 200 PPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPP 234
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 601 SPPPXXGGGXXYXXXXXXXXXXPPPPPXXXXPPPXP 708
SPPP G PPPPP PP P
Sbjct: 260 SPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPP 295
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 31.5 bits (68), Expect = 0.80
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = -1
Query: 707 GXGGGXXXXGGGGGXXXXXXXXXKXXXPPPXXGGGEXXXPPXXKKXPRXXGGXXXFGG 534
G GGG GGGGG G G PP ++ P GG + G
Sbjct: 830 GYGGGYGGGGGGGGGGGGGSYHQPYNQDQRRGGRGGGGGPPGYQRPPYRGGGGGGYHG 887
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +2
Query: 536 PQXXXXPPXXGXFFXXGXXXXFXPPXXXGXXXXIXLXXXXXXXXPPPPPXXXXPPPXPXX 715
P PP F PP I PPPPP PPP P
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Query: 716 XGGG 727
G G
Sbjct: 121 SGLG 124
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXG 725
PPPPP PPPPP G
Sbjct: 105 PPPPPMFGAPPPPPPPSGLG 124
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 95 PPPPPMMGGIPPPPP 109
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +2
Query: 389 GAPPPPKXFXXXXXXX--LWGGXXNPPPFXGXPXXFFPXXG 505
G PPPP F + GG PPP G P P G
Sbjct: 82 GIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSG 122
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXG 725
PPPPP PPPPP G
Sbjct: 579 PPPPPPMLGGPPPPPPPPGG 598
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXGG 728
PPPPP PPPP GG
Sbjct: 578 PPPPPPPMLGGPPPPPPPPGG 598
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 287 PPPPPSSGMWPPPPP 301
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 668 PPPPPXXXXPPPXPXXXGGG 727
PPPPP P P P GGG
Sbjct: 303 PPPPPPPPPPAPAPVSSGGG 322
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 730 PPPXXXXGGGGGXXXXXGGGGG 665
PPP GG GG GGGGG
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGG 71
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 730 PPPXXXXGGGGGXXXXXGGGGG 665
PPP GG GG GGGGG
Sbjct: 74 PPPAPCGGGCGGGGGGCGGGGG 95
Score = 29.1 bits (62), Expect = 4.3
Identities = 27/107 (25%), Positives = 29/107 (27%), Gaps = 2/107 (1%)
Frame = -1
Query: 707 GXGGGXXXXGGGGGXXXXXXXXXKXXXPPPXXGGGEXXXPPXXKKXPRXXGGXXXFGGXX 528
G GGG GGGGG GGG GG GG
Sbjct: 116 GCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGS 175
Query: 527 KXXXXXX--PRGXGKKXXXXXKXGGGFXPPPTXXXXPXXEXFXGGGG 393
P G G GGG+ P+ GGGG
Sbjct: 176 SGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGG 222
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 668 PPPPPXXXXPPPXPXXXGGG 727
PPPPP P P P GGG
Sbjct: 303 PPPPPPPPPPAPAPVSSGGG 322
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 730 PPPXXXXGGGGGXXXXXGGGGG 665
PPP GG GG GGGGG
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGG 71
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 730 PPPXXXXGGGGGXXXXXGGGGG 665
PPP GG GG GGGGG
Sbjct: 74 PPPAPCGGGCGGGGGGCGGGGG 95
Score = 29.1 bits (62), Expect = 4.3
Identities = 27/107 (25%), Positives = 29/107 (27%), Gaps = 2/107 (1%)
Frame = -1
Query: 707 GXGGGXXXXGGGGGXXXXXXXXXKXXXPPPXXGGGEXXXPPXXKKXPRXXGGXXXFGGXX 528
G GGG GGGGG GGG GG GG
Sbjct: 116 GCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGS 175
Query: 527 KXXXXXX--PRGXGKKXXXXXKXGGGFXPPPTXXXXPXXEXFXGGGG 393
P G G GGG+ P+ GGGG
Sbjct: 176 SGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGG 222
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 790 PPPPPLGIIPPPPPP 804
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 134 PPPPPSPPPPPPPPP 148
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 132 PPPPPPPPHYPPPPP 146
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 65 PPPPPPPPMCPPPPP 79
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 66 PPPPPPPMCPPPPPP 80
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 20 PPPPPSPRRAPPPPP 34
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 72 PPPPPPPMPCPPPPP 86
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 73 PPPPPPMPCPPPPPP 87
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 297 PPPPPSSGMWPPPPP 311
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 2 PPPPPPPPPPPPPPP 16
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 3 PPPPPPPPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 2 PPPPPPPPPPPPPPP 16
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 3 PPPPPPPPPPPPPPP 17
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 41 PPPPPMCGCAPPPPP 55
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 96 PPPPPHYYTQPPPPP 110
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 88 PPPPPPTLKAPPPPP 102
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 727 PPXXXXGGGGGXXXXXGGGGG 665
PP GGGGG GGGGG
Sbjct: 314 PPRTPAGGGGGGDFPAGGGGG 334
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 730 PPPXXXXGGGGGXXXXXGGGGG 665
PP GGGGG GGGGG
Sbjct: 314 PPRTPAGGGGGGDFPAGGGGGG 335
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPP 710
PPPPP PPPPP
Sbjct: 790 PPPPPLGIIPPPPPP 804
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.4
Identities = 30/105 (28%), Positives = 30/105 (28%)
Frame = -1
Query: 707 GXGGGXXXXGGGGGXXXXXXXXXKXXXPPPXXGGGEXXXPPXXKKXPRXXGGXXXFGGXX 528
G GG GGG G PPP GGG GG GG
Sbjct: 30 GGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGG 89
Query: 527 KXXXXXXPRGXGKKXXXXXKXGGGFXPPPTXXXXPXXEXFXGGGG 393
G G GGG PPP P GGGG
Sbjct: 90 GGCG-----GGGGGCGGGGGCGGGCAPPP---PPPACGGGCGGGG 126
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 730 PPPXXXXGGGGGXXXXXGGGGG 665
PPP GG GG GGGGG
Sbjct: 56 PPPPACGGGCGGGGGGCGGGGG 77
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 730 PPPXXXXGGGGGXXXXXGGGGG 665
PPP G GGG GGGGG
Sbjct: 57 PPPACGGGCGGGGGGCGGGGGG 78
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXGG 728
PP PP PPPPP GG
Sbjct: 798 PPLPPISSGAPPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 666 PPPPPXXXXXPPPPPXXXXGG 728
PP PP PPPPP GG
Sbjct: 798 PPLPPISSGAPPPPPPPPPGG 818
>Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical
protein Y57G11C.24e protein.
Length = 665
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 604 PPPXXGGGXXYXXXXXXXXXXPPPPPXXXXPPPXP 708
PPP PPPPP PPP P
Sbjct: 447 PPPPLVSDAGVQVEIRREHVAPPPPPVVIPPPPPP 481
>Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical
protein Y57G11C.24d protein.
Length = 845
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 604 PPPXXGGGXXYXXXXXXXXXXPPPPPXXXXPPPXP 708
PPP PPPPP PPP P
Sbjct: 627 PPPPLVSDAGVQVEIRREHVAPPPPPVVIPPPPPP 661
>Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical
protein Y57G11C.24a protein.
Length = 862
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 604 PPPXXGGGXXYXXXXXXXXXXPPPPPXXXXPPPXP 708
PPP PPPPP PPP P
Sbjct: 644 PPPPLVSDAGVQVEIRREHVAPPPPPVVIPPPPPP 678
>Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical
protein Y57G11C.24g protein.
Length = 917
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 604 PPPXXGGGXXYXXXXXXXXXXPPPPPXXXXPPPXP 708
PPP PPPPP PPP P
Sbjct: 699 PPPPLVSDAGVQVEIRREHVAPPPPPVVIPPPPPP 733
>Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 730 PPPXXXXGGGGGXXXXXGGGGG 665
PPP GG G GGGGG
Sbjct: 219 PPPSNPYGGSGNDNGSSGGGGG 240
>Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 730 PPPXXXXGGGGGXXXXXGGGGG 665
PPP GG G GGGGG
Sbjct: 219 PPPSNPYGGSGNDNGSSGGGGG 240
>Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 730 PPPXXXXGGGGGXXXXXGGGGG 665
PPP GG G GGGGG
Sbjct: 219 PPPSNPYGGSGNDNGSSGGGGG 240
>Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 730 PPPXXXXGGGGGXXXXXGGGGG 665
PPP GG G GGGGG
Sbjct: 219 PPPSNPYGGSGNDNGSSGGGGG 240
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Frame = +3
Query: 666 PPPPPXXXXX--PPPPPXXXXGGG 731
PPPPP PPPPP GG
Sbjct: 42 PPPPPCGGGYEAPPPPPPPSYAGG 65
>AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant A
protein.
Length = 917
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 604 PPPXXGGGXXYXXXXXXXXXXPPPPPXXXXPPPXP 708
PPP PPPPP PPP P
Sbjct: 699 PPPPLVSDAGVQVEIRREHVAPPPPPVVIPPPPPP 733
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 671 PPPPXXXXPPPXPXXXGG 724
PPPP PPP P GG
Sbjct: 34 PPPPPACAPPPAPACGGG 51
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,422,759
Number of Sequences: 27780
Number of extensions: 253104
Number of successful extensions: 4126
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1835
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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