Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_L01
         (884 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-P...    56   5e-08
AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-P...    49   7e-06
BT003287-1|AAO25045.1|  520|Drosophila melanogaster GM08204p pro...    29   6.5  
AE014297-904|AAF54358.1|  520|Drosophila melanogaster CG8866-PA,...    29   6.5  

>AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-PA
           protein.
          Length = 171

 Score = 56.4 bits (130), Expect = 5e-08
 Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
 Frame = +1

Query: 259 EDEEAPIEVRGDGNLINRLNSLPIENQPFWYLNWKAYEALRKRPQ----TFQQRPNNF 420
           ++   PI+ RGD + +NRL  LP++ QPFW +N++A EA+R  P+     ++ R N+F
Sbjct: 112 DNSRLPIDARGDRDWVNRLKQLPVDQQPFWLVNYQAIEAMRNNPRPNVGNYEWRGNSF 169


>AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-PA
           protein.
          Length = 190

 Score = 49.2 bits (112), Expect = 7e-06
 Identities = 18/38 (47%), Positives = 27/38 (71%)
 Frame = +1

Query: 268 EAPIEVRGDGNLINRLNSLPIENQPFWYLNWKAYEALR 381
           + PI+  GD   +N L+ LP+E QPFW++N++A EA R
Sbjct: 134 QLPIDAHGDREWVNHLSQLPVEQQPFWFINYQAIEAHR 171


>BT003287-1|AAO25045.1|  520|Drosophila melanogaster GM08204p
           protein.
          Length = 520

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
 Frame = -2

Query: 265 RLPRICSIANQSPRLDTLWD*GRRKTVFGLLQTLPRIIKTKSMVFNVAILFS**RPSGEC 86
           R  ++ +++N SP + T  + GR+  ++   + L   +++ +    + + F    P GE 
Sbjct: 393 RYKQLYALSNSSPSMKTGLEIGRKGELYLYERKLDAALESYTSALGILVPFVNNEPKGER 452

Query: 85  TNCLHDPC--WMQDCQNLK 35
            N L      WM++ +++K
Sbjct: 453 RNLLLQQLEFWMKEAESIK 471


>AE014297-904|AAF54358.1|  520|Drosophila melanogaster CG8866-PA,
           isoform A protein.
          Length = 520

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
 Frame = -2

Query: 265 RLPRICSIANQSPRLDTLWD*GRRKTVFGLLQTLPRIIKTKSMVFNVAILFS**RPSGEC 86
           R  ++ +++N SP + T  + GR+  ++   + L   +++ +    + + F    P GE 
Sbjct: 393 RYKQLYALSNSSPSMKTGLEIGRKGELYLYERKLDAALESYTSALGILVPFVNNEPKGER 452

Query: 85  TNCLHDPC--WMQDCQNLK 35
            N L      WM++ +++K
Sbjct: 453 RNLLLQQLEFWMKEAESIK 471


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,534,434
Number of Sequences: 53049
Number of extensions: 662423
Number of successful extensions: 1840
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1840
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)