Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_K22
         (891 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010044-1|AAQ22513.1|  780|Drosophila melanogaster LD31742p pro...    29   6.5  
AJ010150-1|CAB52415.1|  782|Drosophila melanogaster carnitine pa...    29   6.5  
AE013599-1111|AAF58786.1|  780|Drosophila melanogaster CG12891-P...    29   6.5  
AE013599-1110|AAF58785.2|  780|Drosophila melanogaster CG12891-P...    29   6.5  

>BT010044-1|AAQ22513.1|  780|Drosophila melanogaster LD31742p
           protein.
          Length = 780

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = +3

Query: 108 SNTFIYETTYLFL*FVLIILTSCY*IRYDFQVLFLYQ 218
           SNT  ++ T  FL  +++ L+ C+ +RY  ++L +Y+
Sbjct: 93  SNTINWQVTACFLAALVVWLSICFTMRYTLKLLLMYK 129


>AJ010150-1|CAB52415.1|  782|Drosophila melanogaster carnitine
           palmitoyltransferase I protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = +3

Query: 108 SNTFIYETTYLFL*FVLIILTSCY*IRYDFQVLFLYQ 218
           SNT  ++ T  FL  +++ L+ C+ +RY  ++L +Y+
Sbjct: 93  SNTINWQVTACFLAALVVWLSICFTMRYTLKLLLMYK 129


>AE013599-1111|AAF58786.1|  780|Drosophila melanogaster CG12891-PB,
           isoform B protein.
          Length = 780

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = +3

Query: 108 SNTFIYETTYLFL*FVLIILTSCY*IRYDFQVLFLYQ 218
           SNT  ++ T  FL  +++ L+ C+ +RY  ++L +Y+
Sbjct: 93  SNTINWQVTACFLAALVVWLSICFTMRYTLKLLLMYK 129


>AE013599-1110|AAF58785.2|  780|Drosophila melanogaster CG12891-PA,
           isoform A protein.
          Length = 780

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = +3

Query: 108 SNTFIYETTYLFL*FVLIILTSCY*IRYDFQVLFLYQ 218
           SNT  ++ T  FL  +++ L+ C+ +RY  ++L +Y+
Sbjct: 93  SNTINWQVTACFLAALVVWLSICFTMRYTLKLLLMYK 129


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,463,054
Number of Sequences: 53049
Number of extensions: 332549
Number of successful extensions: 558
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)