Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_K21
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0566 - 4166511-4166632,4167302-4167375,4167509-4167648,416...    29   4.9  
03_05_1074 + 30168065-30168577                                         29   6.5  
02_03_0099 + 15206282-15206917                                         29   6.5  
09_06_0332 + 22382508-22383214,22383576-22383631,22383673-223840...    28   8.6  
04_04_0258 + 23988409-23989580,23990450-23990851,23991138-23991204     28   8.6  

>01_01_0566 -
           4166511-4166632,4167302-4167375,4167509-4167648,
           4167731-4167802,4167915-4167984,4168112-4168185,
           4168316-4168487,4168887-4168976,4169151-4169175,
           4169273-4169432,4169855-4170265,4170443-4170559
          Length = 508

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +3

Query: 516 IILLVRKISPFKQTSGKVVGAYFVE--WGVYLKSXCWTAXXSEP 641
           + L++ +I      S KV   Y      GVY+   CWTA  SEP
Sbjct: 309 VTLVLVQIMTGVSLSSKVKAGYLAPGLMGVYIVFLCWTAIRSEP 352


>03_05_1074 + 30168065-30168577
          Length = 170

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 24/84 (28%), Positives = 34/84 (40%)
 Frame = +1

Query: 274 ADVSVNWNVWTGDAADKSRVLLDKKEVWSGAGSATSAAFKVKKGGRYQMQVELCNSDGCS 453
           A  +VN    +G+A     VL D        G+  S A K   GG       LC++DG  
Sbjct: 11  AVAAVNGRSASGEATAARVVLADGALRRFPGGTRASQAVKAAGGGGGGSSWFLCSADGLE 70

Query: 454 SSEGVEIVVADTDGSHLRPLELFY 525
               V   V   D   L+P +L++
Sbjct: 71  LGAAV-AAVGGGDDEELQPGQLYF 93


>02_03_0099 + 15206282-15206917
          Length = 211

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
 Frame = +1

Query: 325 SRVLLDKKEVWSGAGSATSAAFKV---KKGGRYQMQVELCNSDGCSSSEGVEIVVADTD 492
           +R++++  +  + A +ATS A      + GGRY + +   ++   S++E  E+VV + D
Sbjct: 38  ARLIVEAPDSAAPAAAATSLALAAAARRTGGRYALVLPDRDAAAASAAETAEVVVGEAD 96


>09_06_0332 +
           22382508-22383214,22383576-22383631,22383673-22384004,
           22384395-22384445
          Length = 381

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
 Frame = +3

Query: 714 GQFSSTTXFMQRP*KXKXSIPXPWGXLQKPQK-GYRP 821
           G   S     Q+P      IP PW   Q P   GYRP
Sbjct: 277 GSHGSPVPVEQQPQSIAQHIPGPWSPAQSPNAIGYRP 313


>04_04_0258 + 23988409-23989580,23990450-23990851,23991138-23991204
          Length = 546

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = -3

Query: 237 GRLVDFDDRERALAPAEVRFPWRAAGADGERGHREYERYHPMP 109
           GR  D DD  R   P   R+P   +G  G  G RE   +   P
Sbjct: 191 GRSDDIDDWSRDKKPMPSRYPSLGSGGGGGGGFRESPGFRDSP 233


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,166,197
Number of Sequences: 37544
Number of extensions: 384967
Number of successful extensions: 1086
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)