Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_K21
(878 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF491813-1|AAM09558.1| 2113|Homo sapiens Down syndrome cell adhe... 33 1.0
AF334384-1|AAL57166.1| 2053|Homo sapiens Down syndrome cell adhe... 33 1.0
AF304305-1|AAN32614.1| 1842|Homo sapiens Down syndrome cell adhe... 33 1.0
AF304304-1|AAN32613.1| 2053|Homo sapiens Down syndrome cell adhe... 33 1.0
AB032958-1|BAA86446.2| 2092|Homo sapiens KIAA1132 protein protein. 33 1.0
AL163281-2|CAB90444.1| 1029|Homo sapiens human CHD2-52 down synd... 30 9.6
AF289030-1|AAL56711.1| 1746|Homo sapiens Down syndrome cell adhe... 30 9.6
AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell adhe... 30 9.6
AF023449-1|AAC17966.1| 1896|Homo sapiens Down syndrome cell adhe... 30 9.6
AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell adhe... 30 9.6
>AF491813-1|AAM09558.1| 2113|Homo sapiens Down syndrome cell adhesion
molecule 2 protein.
Length = 2113
Score = 33.5 bits (73), Expect = 1.0
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Frame = +1
Query: 253 LVTKKDAADVSVNWNVWTGDAADKSRVLLD--KKEVWSGAGSATSAAFKV-----KKGGR 411
L T ++ +N W + ++L+ K W+ G +++ +V ++
Sbjct: 1547 LFTHINSTHARLNLQGWNNGGCPITAIVLEYRPKGTWAWQGLRANSSGEVFLTELREATW 1606
Query: 412 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLE 516
Y++++ CNS GC +E + D DGS + P++
Sbjct: 1607 YELRMRACNSAGC-GNETAQFATLDYDGSTIPPIK 1640
>AF334384-1|AAL57166.1| 2053|Homo sapiens Down syndrome cell adhesion
molecule DSCAML1 protein.
Length = 2053
Score = 33.5 bits (73), Expect = 1.0
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Frame = +1
Query: 253 LVTKKDAADVSVNWNVWTGDAADKSRVLLD--KKEVWSGAGSATSAAFKV-----KKGGR 411
L T ++ +N W + ++L+ K W+ G +++ +V ++
Sbjct: 1487 LFTHINSTHARLNLQGWNNGGCPITAIVLEYRPKGTWAWQGLRANSSGEVFLTELREATW 1546
Query: 412 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLE 516
Y++++ CNS GC +E + D DGS + P++
Sbjct: 1547 YELRMRACNSAGC-GNETAQFATLDYDGSTIPPIK 1580
>AF304305-1|AAN32614.1| 1842|Homo sapiens Down syndrome cell adhesion
molecule like-protein 1b protein.
Length = 1842
Score = 33.5 bits (73), Expect = 1.0
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Frame = +1
Query: 253 LVTKKDAADVSVNWNVWTGDAADKSRVLLD--KKEVWSGAGSATSAAFKV-----KKGGR 411
L T ++ +N W + ++L+ K W+ G +++ +V ++
Sbjct: 1276 LFTHINSTHARLNLQGWNNGGCPITAIVLEYRPKGTWAWQGLRANSSGEVFLTELREATW 1335
Query: 412 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLE 516
Y++++ CNS GC +E + D DGS + P++
Sbjct: 1336 YELRMRACNSAGC-GNETAQFATLDYDGSTIPPIK 1369
>AF304304-1|AAN32613.1| 2053|Homo sapiens Down syndrome cell adhesion
molecule like-protein 1a protein.
Length = 2053
Score = 33.5 bits (73), Expect = 1.0
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Frame = +1
Query: 253 LVTKKDAADVSVNWNVWTGDAADKSRVLLD--KKEVWSGAGSATSAAFKV-----KKGGR 411
L T ++ +N W + ++L+ K W+ G +++ +V ++
Sbjct: 1487 LFTHINSTHARLNLQGWNNGGCPITAIVLEYRPKGTWAWQGLRANSSGEVFLTELREATW 1546
Query: 412 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLE 516
Y++++ CNS GC +E + D DGS + P++
Sbjct: 1547 YELRMRACNSAGC-GNETAQFATLDYDGSTIPPIK 1580
>AB032958-1|BAA86446.2| 2092|Homo sapiens KIAA1132 protein protein.
Length = 2092
Score = 33.5 bits (73), Expect = 1.0
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Frame = +1
Query: 253 LVTKKDAADVSVNWNVWTGDAADKSRVLLD--KKEVWSGAGSATSAAFKV-----KKGGR 411
L T ++ +N W + ++L+ K W+ G +++ +V ++
Sbjct: 1526 LFTHINSTHARLNLQGWNNGGCPITAIVLEYRPKGTWAWQGLRANSSGEVFLTELREATW 1585
Query: 412 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPLE 516
Y++++ CNS GC +E + D DGS + P++
Sbjct: 1586 YELRMRACNSAGC-GNETAQFATLDYDGSTIPPIK 1619
>AL163281-2|CAB90444.1| 1029|Homo sapiens human CHD2-52 down
syndrome cell adhesion molecule protein.
Length = 1029
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 412 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPL 513
Y++Q+ +CNS GC+ + + DGS + PL
Sbjct: 561 YELQMRVCNSAGCAEKQ-ANFATLNYDGSTIPPL 593
>AF289030-1|AAL56711.1| 1746|Homo sapiens Down syndrome cell adhesion
molecule splice variant protein.
Length = 1746
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 412 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPL 513
Y++Q+ +CNS GC+ + + DGS + PL
Sbjct: 1296 YELQMRVCNSAGCAEKQ-ANFATLNYDGSTIPPL 1328
>AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell adhesion
molecule protein.
Length = 2012
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 412 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPL 513
Y++Q+ +CNS GC+ + + DGS + PL
Sbjct: 1544 YELQMRVCNSAGCAEKQ-ANFATLNYDGSTIPPL 1576
>AF023449-1|AAC17966.1| 1896|Homo sapiens Down syndrome cell adhesion
molecule protein.
Length = 1896
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 412 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPL 513
Y++Q+ +CNS GC+ + + DGS + PL
Sbjct: 1530 YELQMRVCNSAGCAEKQ-ANFATLNYDGSTIPPL 1562
>AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell adhesion
molecule isoform CHD2-42 precursor variant protein.
Length = 2023
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 412 YQMQVELCNSDGCSSSEGVEIVVADTDGSHLRPL 513
Y++Q+ +CNS GC+ + + DGS + PL
Sbjct: 1555 YELQMRVCNSAGCAEKQ-ANFATLNYDGSTIPPL 1587
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,675,463
Number of Sequences: 237096
Number of extensions: 2009044
Number of successful extensions: 4648
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4648
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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