Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_K20
         (837 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060228-1|AAL25267.1|  154|Drosophila melanogaster GH01635p pro...   135   8e-32
AE014297-829|AAF54298.1|  154|Drosophila melanogaster CG9836-PA ...   135   8e-32
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi...    29   6.0  
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA...    29   6.0  

>AY060228-1|AAL25267.1|  154|Drosophila melanogaster GH01635p
           protein.
          Length = 154

 Score =  135 bits (326), Expect = 8e-32
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = +2

Query: 389 GAPACGDVMKLQIKVDENGKIIDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 568
           GAPACGDVMKLQIKVDENGKI+DAKFKTFGCGSAIASSSLATEWVKGK++DEA KLKNTD
Sbjct: 56  GAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKSIDEAGKLKNTD 115

Query: 569 IAKELSLP 592
           IAKEL LP
Sbjct: 116 IAKELRLP 123



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 45/115 (39%), Positives = 56/115 (48%)
 Frame = +1

Query: 292 APYHANVIDHYENPRNVGSLDKKDKNVGTGLVWCTCMWRRNEVANQSGREWKNH*CQI*N 471
           A YH NV++HYENPRNVGSLDKKD  VGTGLV         ++  +     K    +   
Sbjct: 24  ALYHENVVEHYENPRNVGSLDKKDVTVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKT 83

Query: 472 FWMWFSYSFKLSCH*MG*RKNS**GTKIEEHRYC*RAVLTPVKLHCSMLAEDAXK 636
           F    + +           K+     K++         L PVKLHCSMLAEDA K
Sbjct: 84  FGCGSAIASSSLATEWVKGKSIDEAGKLKNTDIAKELRLPPVKLHCSMLAEDAIK 138


>AE014297-829|AAF54298.1|  154|Drosophila melanogaster CG9836-PA
           protein.
          Length = 154

 Score =  135 bits (326), Expect = 8e-32
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = +2

Query: 389 GAPACGDVMKLQIKVDENGKIIDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTD 568
           GAPACGDVMKLQIKVDENGKI+DAKFKTFGCGSAIASSSLATEWVKGK++DEA KLKNTD
Sbjct: 56  GAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKSIDEAGKLKNTD 115

Query: 569 IAKELSLP 592
           IAKEL LP
Sbjct: 116 IAKELRLP 123



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 45/115 (39%), Positives = 56/115 (48%)
 Frame = +1

Query: 292 APYHANVIDHYENPRNVGSLDKKDKNVGTGLVWCTCMWRRNEVANQSGREWKNH*CQI*N 471
           A YH NV++HYENPRNVGSLDKKD  VGTGLV         ++  +     K    +   
Sbjct: 24  ALYHENVVEHYENPRNVGSLDKKDVTVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKT 83

Query: 472 FWMWFSYSFKLSCH*MG*RKNS**GTKIEEHRYC*RAVLTPVKLHCSMLAEDAXK 636
           F    + +           K+     K++         L PVKLHCSMLAEDA K
Sbjct: 84  FGCGSAIASSSLATEWVKGKSIDEAGKLKNTDIAKELRLPPVKLHCSMLAEDAIK 138


>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
            ubiquitin-conjugatingenzyme protein.
          Length = 4876

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
 Frame = +2

Query: 422  QIKVDENGKIIDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELS----L 589
            ++KVDEN K     +  FG  +     +L++     +T+ E +K +  DI  +L+    L
Sbjct: 1578 EMKVDENEKQEKVDYDAFGLVNGFKDKTLSSLNSVKQTLKEEVKKEKADIMDKLTIAKFL 1637

Query: 590  PQSSFIALCLQK 625
            P+ S +   +QK
Sbjct: 1638 PKLSLLESYMQK 1649


>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
            protein.
          Length = 4876

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
 Frame = +2

Query: 422  QIKVDENGKIIDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELS----L 589
            ++KVDEN K     +  FG  +     +L++     +T+ E +K +  DI  +L+    L
Sbjct: 1578 EMKVDENEKQEKVDYDAFGLVNGFKDKTLSSLNSVKQTLKEEVKKEKADIMDKLTIAKFL 1637

Query: 590  PQSSFIALCLQK 625
            P+ S +   +QK
Sbjct: 1638 PKLSLLESYMQK 1649


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,865,260
Number of Sequences: 53049
Number of extensions: 515130
Number of successful extensions: 1102
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)