Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_K19
(950 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16LC6 Cluster: 3-5 exonuclease; n=2; Culicidae|Rep: 3-... 87 5e-16
UniRef50_Q9VGN7 Cluster: CG6744-PA; n=2; Sophophora|Rep: CG6744-... 81 5e-14
UniRef50_Q16LC8 Cluster: Putative uncharacterized protein; n=2; ... 65 3e-09
UniRef50_UPI00015B5AAD Cluster: PREDICTED: similar to 3-5 exonuc... 62 2e-08
UniRef50_UPI0000DB78E7 Cluster: PREDICTED: similar to CG6744-PA;... 54 7e-06
UniRef50_UPI0000E4A320 Cluster: PREDICTED: hypothetical protein;... 52 3e-05
UniRef50_Q28H97 Cluster: Chromosome 14 open reading frame 114; n... 51 5e-05
UniRef50_O35948 Cluster: Homolog of human Werners syndrome prote... 49 2e-04
UniRef50_Q4TA45 Cluster: Chromosome 10 SCAF7449, whole genome sh... 47 6e-04
UniRef50_Q14191 Cluster: Werner syndrome ATP-dependent helicase;... 46 0.001
UniRef50_UPI000155641E Cluster: PREDICTED: similar to PXN-FBPL, ... 33 8.1
>UniRef50_Q16LC6 Cluster: 3-5 exonuclease; n=2; Culicidae|Rep: 3-5
exonuclease - Aedes aegypti (Yellowfever mosquito)
Length = 771
Score = 87.4 bits (207), Expect = 5e-16
Identities = 38/80 (47%), Positives = 53/80 (66%)
Frame = +2
Query: 320 NIKIVTNERNCDEAVNELRRRCCDYNALXFDCEWVTDHGKRNPVALVQLSSSDGLCCLFR 499
+++IVTN +C + + LR C ++ L FDCEWV + GKR+PVAL+QL++ GLC L R
Sbjct: 45 SVRIVTNPEDCQKVIGLLRDHCREFRVLGFDCEWVNEQGKRHPVALLQLATHRGLCALIR 104
Query: 500 LSXMEXIPNSLKDLLXDXKI 559
L M+ IP L +LL D I
Sbjct: 105 LCEMKRIPPELGELLNDPAI 124
>UniRef50_Q9VGN7 Cluster: CG6744-PA; n=2; Sophophora|Rep: CG6744-PA
- Drosophila melanogaster (Fruit fly)
Length = 583
Score = 80.6 bits (190), Expect = 5e-14
Identities = 38/81 (46%), Positives = 48/81 (59%)
Frame = +2
Query: 362 VNELRRRCCDYNALXFDCEWVTDHGKRNPVALVQLSSSDGLCCLFRLSXMEXIPNSLKDL 541
+NEL+ C + L FDCEW+T G R PVAL+QLSS GLC LFRL M+ IP L++L
Sbjct: 67 LNELKNHCQTFKVLGFDCEWITVGGSRRPVALLQLSSHRGLCALFRLCHMKQIPQDLREL 126
Query: 542 LXDXKIX*XWXXXXXDDXKIS 604
L D + D K+S
Sbjct: 127 LEDDSVIKVGVAPQEDAMKLS 147
>UniRef50_Q16LC8 Cluster: Putative uncharacterized protein; n=2;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 257
Score = 64.9 bits (151), Expect = 3e-09
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +2
Query: 311 SYINIKIVTNERNCDEAVNELRRRCCDYNALXFDCEW--VTDHGKRNPVALVQLSSSDGL 484
S + +V + C + +L+ C DY L FDCEW + G VAL+QL+S+ GL
Sbjct: 16 SRYKVHVVGDYATCQDFTLQLKLHCEDYPVLGFDCEWWCTSSMGNNRKVALLQLASAGGL 75
Query: 485 CCLFRLSXMEXIPNSLKDLLXDXKI 559
C L +++ + IP L DLL + +I
Sbjct: 76 CILVQMTRLHSIPQELSDLLHNDRI 100
>UniRef50_UPI00015B5AAD Cluster: PREDICTED: similar to 3-5
exonuclease; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to 3-5 exonuclease - Nasonia vitripennis
Length = 788
Score = 62.1 bits (144), Expect = 2e-08
Identities = 32/72 (44%), Positives = 44/72 (61%)
Frame = +2
Query: 329 IVTNERNCDEAVNELRRRCCDYNALXFDCEWVTDHGKRNPVALVQLSSSDGLCCLFRLSX 508
+V + CD AV +R D L FDCEWV + PV+L+QL++ +G+C LFRLS
Sbjct: 247 LVDSPEKCDYAVQRIRCNLSD-GVLGFDCEWVNEE----PVSLLQLATHNGVCALFRLSK 301
Query: 509 MEXIPNSLKDLL 544
+ IP LK+LL
Sbjct: 302 IGHIPPKLKELL 313
>UniRef50_UPI0000DB78E7 Cluster: PREDICTED: similar to CG6744-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG6744-PA
- Apis mellifera
Length = 525
Score = 53.6 bits (123), Expect = 7e-06
Identities = 27/79 (34%), Positives = 45/79 (56%)
Frame = +2
Query: 323 IKIVTNERNCDEAVNELRRRCCDYNALXFDCEWVTDHGKRNPVALVQLSSSDGLCCLFRL 502
I + CD A+ + + + L FDCEWV + PV+L+QL++ +G+C LFR+
Sbjct: 54 IILADTPEKCDYAIQRIHCNLSN-DVLGFDCEWVNE----GPVSLLQLATFNGVCGLFRI 108
Query: 503 SXMEXIPNSLKDLLXDXKI 559
+ IP L++LL + +I
Sbjct: 109 GKIGYIPQKLEELLANKRI 127
>UniRef50_UPI0000E4A320 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 531
Score = 51.6 bits (118), Expect = 3e-05
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +2
Query: 320 NIKIVTNERNCDEAVNELRRRCCDYNALXFDCEWVTDHGKRNPVALVQLSSS-DGLCCLF 496
+I ++ + +AV + DCEWVT G+R PVAL+QLSS + C LF
Sbjct: 16 DIFVIDSSSAYHKAVESFAEATKQMKVIGLDCEWVTKDGQRQPVALLQLSSPVNQSCLLF 75
Query: 497 RLSXME-XIPNSLKDLLXD 550
RL ++ +P S+ +L D
Sbjct: 76 RLDQLDGELPESILTILQD 94
>UniRef50_Q28H97 Cluster: Chromosome 14 open reading frame 114; n=3;
Tetrapoda|Rep: Chromosome 14 open reading frame 114 -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 353
Score = 50.8 bits (116), Expect = 5e-05
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Frame = +2
Query: 272 KRKSRFLDAVNAFSYINIKIVTNERNCDEAVNELRRRCCD-YNALXFDCEWVTDHGKRNP 448
K +S + + +I+IV+ EAV L ++ D Y L DCEWV+ GK P
Sbjct: 68 KVESSGISVIEKILVADIEIVSKSEEW-EAVWLLLKKDLDVYPVLGMDCEWVSVDGKAGP 126
Query: 449 VALVQLSSSDGLCCLFRLSXME----XIPNSLKDLL 544
V+L+Q++S G C L RL + IP +L +LL
Sbjct: 127 VSLLQMASYSGFCVLVRLPQLTSSGCTIPKTLLELL 162
>UniRef50_O35948 Cluster: Homolog of human Werners syndrome protein;
n=5; Murinae|Rep: Homolog of human Werners syndrome
protein - Mus musculus (Mouse)
Length = 643
Score = 49.2 bits (112), Expect = 2e-04
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +2
Query: 347 NCDEAVNELRRRCCDYNALXFDCEW--VTDHGKRNPVALVQLSSSDGLCCLFRLSXMEXI 520
+C ++ R D + + FD EW + GKR+ VA++QL S+ C LF +S M
Sbjct: 55 DCSFLSEDISMRLSDGDVVGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISSMSVF 114
Query: 521 PNSLKDLLXDXKI 559
P LK LL + I
Sbjct: 115 PQGLKMLLENKSI 127
>UniRef50_Q4TA45 Cluster: Chromosome 10 SCAF7449, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 10
SCAF7449, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 624
Score = 47.2 bits (107), Expect = 6e-04
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Frame = +2
Query: 401 LXFDCEWVTDHGKRNPVALVQLSSSDGLCCLFRL----SXMEXIPNSLKDLLXDXKI 559
L DCEWV+ GK + V+L+Q+++ GLC L RL S + P SL ++L D ++
Sbjct: 121 LGLDCEWVSAKGKASSVSLLQMATYSGLCVLVRLQAFRSCQQPFPLSLAEVLRDPRV 177
>UniRef50_Q14191 Cluster: Werner syndrome ATP-dependent helicase;
n=14; Euarchontoglires|Rep: Werner syndrome
ATP-dependent helicase - Homo sapiens (Human)
Length = 1432
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +2
Query: 275 RKSRFLDAVNAFSYINIKIVTNERN-CDEAVNELRRRCCDYNALXFDCEW--VTDHGKRN 445
RKS F D + + + + + + C ++ D + + FD EW + + GK
Sbjct: 36 RKSVFEDDLPFLEFTGSIVYSYDASDCSFLSEDISMSLSDGDVVGFDMEWPPLYNRGKLG 95
Query: 446 PVALVQLSSSDGLCCLFRLSXMEXIPNSLKDLLXDXKI 559
VAL+QL S+ C LF +S M P LK LL + +
Sbjct: 96 KVALIQLCVSESKCYLFHVSSMSVFPQGLKMLLENKAV 133
>UniRef50_UPI000155641E Cluster: PREDICTED: similar to PXN-FBPL,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to PXN-FBPL, partial - Ornithorhynchus anatinus
Length = 1650
Score = 33.5 bits (73), Expect = 8.1
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 353 DEAVNELRRRCCDYNALXFDCEWVTDHGKRNPVALVQLSSSDGLCCLFRLSXME 514
D + +R C Y L F+ W+ D G R+ ++ ++++S G CC RL E
Sbjct: 1025 DGSTGSAGKRGCVYTNLEFEPWWMVDLGSRSNISHIRITSR-GDCCENRLGGAE 1077
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,804,590
Number of Sequences: 1657284
Number of extensions: 8270840
Number of successful extensions: 19481
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19475
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 87774035305
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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