Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_K19
         (950 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0117 - 13860418-13860524,13860612-13860810,13860969-138611...    30   3.1  
01_03_0284 - 14595643-14595663,14595978-14596018,14596379-145967...    30   3.1  
10_08_0985 - 22042801-22042963,22043019-22043138,22043261-220435...    29   5.4  
02_05_0835 - 32099966-32100111,32100418-32100465,32100673-321007...    28   9.5  
01_07_0248 + 42261373-42261609,42261733-42261905,42261986-422620...    28   9.5  
01_01_0233 - 1957104-1958041,1958213-1958467,1959420-1960136,196...    28   9.5  

>12_02_0117 -
           13860418-13860524,13860612-13860810,13860969-13861148,
           13861230-13861375,13862185-13862323,13863076-13863153,
           13863654-13863722,13863806-13863925,13864792-13864875,
           13864961-13865032,13865204-13865345,13866016-13866023
          Length = 447

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 344 RNCDEAVNELRRRCCDYNALXFD-CEWVTDHGKRNPVALVQLSSSDGLC 487
           R  +E VNE+RR+ C Y         +V D G  +P+   +LS    LC
Sbjct: 358 RKVNEVVNEIRRQRCSYLRYSLQVLNYVDDIGTFSPLTFSKLSCRLRLC 406


>01_03_0284 -
           14595643-14595663,14595978-14596018,14596379-14596732,
           14597023-14597494,14597524-14600001
          Length = 1121

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
 Frame = +2

Query: 323 IKIVTNERNCDEAVNELRRRCCDYN-ALXFDCEWVTDHGK--RNPVALVQLSSSDGLCCL 493
           I + TN+++CD+A+ +L++  C     L  D  W  D  K  +    LVQ  +   +   
Sbjct: 247 ITMTTNDKDCDKALQKLKQEVCGKRYLLVLDDVWNRDADKWAKLKTCLVQGGAGSAILTT 306

Query: 494 FRLSXMEXIPNSLK 535
            RL+ +     S++
Sbjct: 307 TRLTEVARTMGSVQ 320


>10_08_0985 -
           22042801-22042963,22043019-22043138,22043261-22043562,
           22044055-22044351,22044448-22044556,22044826-22045358,
           22045446-22045644,22045741-22045865,22045937-22046020,
           22046093-22046221,22046337-22046465,22046593-22046739,
           22047106-22047346,22047859-22047980
          Length = 899

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +1

Query: 199 IKNKIRDLFSNSSSCCRGSNLFILETEKQISRRCE 303
           I+ +I   FSN SSC  G  L + E + Q SRRC+
Sbjct: 702 IEEEIIRRFSNPSSCRLGIFLCLGEFQVQASRRCK 736


>02_05_0835 -
           32099966-32100111,32100418-32100465,32100673-32100770,
           32101269-32101348,32101615-32101686,32102260-32102301,
           32102382-32102543,32102971-32103199,32103681-32103747,
           32103907-32104003
          Length = 346

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -2

Query: 316 IRKSIHSV*KSAFPFPK*ISYCPYSKNCCC*INLVSCF*LHD-K*IEYNNIIN 161
           I K++H +      +P  + YC + K+ C  +N   C  + D + +E  +IIN
Sbjct: 139 IDKAVHQMIVDNGAYPSPLGYCGFPKSVCTSVNECICHGIPDSRPLEDGDIIN 191


>01_07_0248 +
           42261373-42261609,42261733-42261905,42261986-42262058,
           42262148-42262282,42262352-42262562,42262886-42263034,
           42263169-42263267,42263821-42263989,42264176-42264308,
           42264600-42264694,42264774-42264882,42265136-42265295,
           42265433-42265594,42265814-42265985,42266254-42266402,
           42266914-42266951,42267779-42267839,42267913-42268155,
           42268233-42268315,42269521-42269609,42270449-42270495,
           42270576-42270656,42270737-42270899,42271077-42271267,
           42271691-42271762
          Length = 1097

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = +3

Query: 324 SKLSPMKEIATKRSMNYEGDAVTTMLXDLTVNG*QITEKEIQLHWY 461
           SKLS  +++ T +SM + G+A+ +M     V    ITE   QLH Y
Sbjct: 93  SKLSAYEDLQTIKSMGFRGEALASMTYVGHVTVTTITEG--QLHGY 136


>01_01_0233 -
           1957104-1958041,1958213-1958467,1959420-1960136,
           1960728-1961403
          Length = 861

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 499 PEQATQAIR***LYQCNWISFSVICH 422
           PEQAT++       +C W+ F VICH
Sbjct: 51  PEQATES-------KCGWLGFQVICH 69


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,093,375
Number of Sequences: 37544
Number of extensions: 212786
Number of successful extensions: 387
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2741249160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)