BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_K19
(950 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 25 1.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 25 1.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 25 1.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 25 1.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 25 1.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 25 1.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 25 1.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 25 1.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 25 1.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 25 1.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 25 1.3
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 5.4
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 23 5.4
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 9.4
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 9.4
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 9.4
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 178 YNNIINRTNKHLHSTDFYYTIQHLININNP 89
YNN N NKH ++ YY I ++ I P
Sbjct: 94 YNNNYNNYNKHNYN-KLYYNINYIEQIPIP 122
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 178 YNNIINRTNKHLHSTDFYYTIQHLININNP 89
YNN N NKH ++ YY I ++ I P
Sbjct: 94 YNNNYNNYNKHNYN-KLYYNINYIEQIPIP 122
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 178 YNNIINRTNKHLHSTDFYYTIQHLININNP 89
YNN N NKH ++ YY I ++ I P
Sbjct: 94 YNNNYNNYNKHNYN-KLYYNINYIEQIPIP 122
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 178 YNNIINRTNKHLHSTDFYYTIQHLININNP 89
YNN N NKH ++ YY I ++ I P
Sbjct: 94 YNNNYNNYNKHNYN-KLYYNINYIEQIPIP 122
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 178 YNNIINRTNKHLHSTDFYYTIQHLININNP 89
YNN N NKH ++ YY I ++ I P
Sbjct: 94 YNNNYNNYNKHNYN-KLYYNINYIEQIPIP 122
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 178 YNNIINRTNKHLHSTDFYYTIQHLININNP 89
YNN N NKH ++ YY I ++ I P
Sbjct: 94 YNNNYNNYNKHNYN-KLYYNINYIEQIPIP 122
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 178 YNNIINRTNKHLHSTDFYYTIQHLININNP 89
YNN N NKH ++ YY I ++ I P
Sbjct: 94 YNNNYNNYNKHNYN-KLYYNINYIEQIPIP 122
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 178 YNNIINRTNKHLHSTDFYYTIQHLININNP 89
YNN N NKH ++ YY I ++ I P
Sbjct: 94 YNNNYNNYNKHNYN-KLYYNINYIEQIPIP 122
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.6 bits (51), Expect = 1.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 178 YNNIINRTNKHLHSTDFYYTIQHLININNP 89
YNN N NKH ++ YY I ++ I P
Sbjct: 94 YNNNYNNYNKHNYN-KLYYNINYIEQIPIP 122
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.6 bits (51), Expect = 1.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 178 YNNIINRTNKHLHSTDFYYTIQHLININNP 89
YNN N NKH ++ YY I ++ I P
Sbjct: 327 YNNNYNNYNKHNYN-KLYYNINYIEQIPIP 355
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.6 bits (51), Expect = 1.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 178 YNNIINRTNKHLHSTDFYYTIQHLININNP 89
YNN N NKH ++ YY I ++ I P
Sbjct: 327 YNNNYNNYNKHNYN-KLYYNINYIEQIPIP 355
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.6 bits (46), Expect = 5.4
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 286 ISRRCECFFVYKYQNCH 336
++RRC C ++YK H
Sbjct: 322 VARRCLCEYLYKQLELH 338
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.6 bits (46), Expect = 5.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 363 TASSQFLSLVTILIFIYEKAFTASRNLLFRFQNK 262
+ASS FLSL+ + +Y F SR L K
Sbjct: 10 SASSVFLSLLIPALILYFIYFRISRRHLLELAEK 43
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.8 bits (44), Expect = 9.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 470 MIIVPVQLDFFFRDLS 423
+II+PV + FF DLS
Sbjct: 103 LIILPVAISFFNDDLS 118
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 9.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 470 MIIVPVQLDFFFRDLS 423
+II+PV + FF DLS
Sbjct: 103 LIILPVAISFFNDDLS 118
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 9.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 470 MIIVPVQLDFFFRDLS 423
+II+PV + FF DLS
Sbjct: 103 LIILPVAISFFNDDLS 118
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,571
Number of Sequences: 438
Number of extensions: 2788
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31202262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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