Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_K17
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10990-8|AAB59173.2| 223|Caenorhabditis elegans Hypothetical pr... 32 0.64
Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical p... 29 3.4
Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical p... 29 3.4
Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical p... 29 3.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 29 5.9
AF068714-7|AAT68905.1| 592|Caenorhabditis elegans Egg laying de... 29 5.9
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 29 5.9
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 29 5.9
AF024502-6|AAB70378.4| 402|Caenorhabditis elegans Hypothetical ... 28 7.8
AC006729-6|AAF60464.1| 282|Caenorhabditis elegans Hypothetical ... 28 7.8
>L10990-8|AAB59173.2| 223|Caenorhabditis elegans Hypothetical
protein C30A5.3 protein.
Length = 223
Score = 31.9 bits (69), Expect = 0.64
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 614 YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIA 736
Y+ R+F +E ALL + +P+TC + E W FL A
Sbjct: 71 YEHLRQFCIELNGLALLLQRECIPETCQQMTATEQWIFLCA 111
>Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical
protein C36B1.12c protein.
Length = 662
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 537 KRQQRGLFTVPGLLLAFCSHVLSCV-IPLILWITVL 433
+RQ + + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical
protein C36B1.12b protein.
Length = 640
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 537 KRQQRGLFTVPGLLLAFCSHVLSCV-IPLILWITVL 433
+RQ + + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical
protein C36B1.12a protein.
Length = 652
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 537 KRQQRGLFTVPGLLLAFCSHVLSCV-IPLILWITVL 433
+RQ + + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.7 bits (61), Expect = 5.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 143 VCPNSSMYHYHVWIQLTLNTR 81
VCP + + YH W+ + +N R
Sbjct: 140 VCPTTQLMKYHTWLTMNVNER 160
>AF068714-7|AAT68905.1| 592|Caenorhabditis elegans Egg laying
defective protein 8,isoform c protein.
Length = 592
Score = 28.7 bits (61), Expect = 5.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 143 VCPNSSMYHYHVWIQLTLNTR 81
VCP + + YH W+ + +N R
Sbjct: 140 VCPTTQLMKYHTWLTMNVNER 160
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.7 bits (61), Expect = 5.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 143 VCPNSSMYHYHVWIQLTLNTR 81
VCP + + YH W+ + +N R
Sbjct: 140 VCPTTQLMKYHTWLTMNVNER 160
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.7 bits (61), Expect = 5.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 143 VCPNSSMYHYHVWIQLTLNTR 81
VCP + + YH W+ + +N R
Sbjct: 140 VCPTTQLMKYHTWLTMNVNER 160
>AF024502-6|AAB70378.4| 402|Caenorhabditis elegans Hypothetical
protein M151.1 protein.
Length = 402
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = -3
Query: 790 HSPAWSERPTPN*DTYSVSYEKAPRFPKGERRTGIR*AAGSEQESARGSFQGETPGIF 617
H AW+ R P ++ + K ++ K E + G G+E+ +G+T F
Sbjct: 96 HDKAWNNRSLPQKSRWNQASVKLAQYQKAEEKMGFIKVFGTEEFQNYSKRRGQTRNSF 153
>AC006729-6|AAF60464.1| 282|Caenorhabditis elegans Hypothetical
protein Y24D9A.5 protein.
Length = 282
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 428 GGNTVIHRIRGITQERTCEQKASKRPGTVK 517
GG +V +R + Q+++ ++SKRPG ++
Sbjct: 167 GGKSVFYRFTNLIQKKSFSVRSSKRPGILQ 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,201,103
Number of Sequences: 27780
Number of extensions: 409694
Number of successful extensions: 1218
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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