Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_K16
(885 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 161 2e-38
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 73 7e-12
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 5e-09
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 58 3e-07
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 58 4e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 43 0.009
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 41 0.036
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.084
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 38 0.26
UniRef50_A7BAA3 Cluster: Putative uncharacterized protein; n=1; ... 36 1.8
UniRef50_UPI000023D2CE Cluster: hypothetical protein FG07076.1; ... 34 4.2
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.3
UniRef50_Q2SKV3 Cluster: Transcriptional regulator containing a ... 33 9.7
UniRef50_Q4CSD7 Cluster: Putative uncharacterized protein; n=2; ... 33 9.7
UniRef50_A7SYZ9 Cluster: Predicted protein; n=1; Nematostella ve... 33 9.7
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 161 bits (392), Expect = 2e-38
Identities = 75/84 (89%), Positives = 77/84 (91%), Gaps = 1/84 (1%)
Frame = +3
Query: 558 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCXPFSLREAWRFLIAH 737
TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTC PFSLREAWRFLIAH
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH 83
Query: 738 AVGISVRCRSFAPA-GLCARTPRS 806
AVGISVRCRSFAP+ +C P S
Sbjct: 84 AVGISVRCRSFAPSWAVCTNPPFS 107
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 73.3 bits (172), Expect = 7e-12
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +3
Query: 558 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 671
TSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/42 (78%), Positives = 34/42 (80%)
Frame = +3
Query: 558 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 683
TSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +1
Query: 322 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 420
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.1 bits (149), Expect = 5e-09
Identities = 38/57 (66%), Positives = 39/57 (68%)
Frame = -1
Query: 555 RGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 385
RGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 4 RGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 58.0 bits (134), Expect = 3e-07
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = -3
Query: 805 ERGVRAHSPAGANDLHRTEIPTA*AMRKR-HASRREKGXQVSGKRQGRNRRAHEGASRGK 629
ERGVRA+SPA + + ++ + K + +K QVSGKRQGRNRRAHEGA+ K
Sbjct: 25 ERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEK 84
Query: 628 RLVSL*SCRVSPPLT 584
SL PPLT
Sbjct: 85 SPASLSPVGFRPPLT 99
Score = 54.8 bits (126), Expect = 3e-06
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = -2
Query: 782 PSWSERPTPN*DTYSVSYEKAPRFPKGERXTGIR*AAGSEQESARGSFQG 633
P+WSERP P+ DT SVSYEKAPRFPKG++ + +G Q R + +G
Sbjct: 33 PAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV---SGKRQGRNRRAHEG 79
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 57.6 bits (133), Expect = 4e-07
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2
Query: 650 VRSPVPTLPLTGYLSAFLPSGSVALSH 730
+RSPVPTLPLTGYLSAFLPSGSVALSH
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSH 27
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +1
Query: 298 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 456
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 100 DPDMIRYIDEFGQTTTRMQ 156
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +2
Query: 224 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 346
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 43.2 bits (97), Expect = 0.009
Identities = 21/29 (72%), Positives = 21/29 (72%)
Frame = +3
Query: 798 PRSXPHRCALSGNYRLESIXVRXXLSPLA 884
P P RCALSGNYRLES VR LSPLA
Sbjct: 4 PPVQPDRCALSGNYRLESNPVRHDLSPLA 32
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 42.3 bits (95), Expect = 0.016
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 522 VAGVFXXXXXXXTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 671
++ +F T+ITKI Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 41.1 bits (92), Expect = 0.036
Identities = 27/76 (35%), Positives = 32/76 (42%)
Frame = +3
Query: 585 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCXPFSLREAWRFLIAHAVGISVRCR 764
VR GETRQD K P P PFSL + + GIS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 765 SFAPAGLCARTPRSXP 812
SFAP+ ++ P P
Sbjct: 83 SFAPSWAVSKNPPFSP 98
Score = 35.1 bits (77), Expect = 2.4
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1
Query: 613 IKIPGVSPWKLPRALSCSDPAAYRIPVXLSPFGKRGA 723
+KI VS LP ALSCS+PA RIPV PF G+
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPV--PPFSLAGS 66
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.084
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 368 ERGSGRAPNTQTASPRALADSLMQ 297
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 38.3 bits (85), Expect = 0.26
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 879 VAIXXXLPGWTQDDSYRIRRXXXXXXXGFVHT-AQLERTT 763
+A+ LPGWTQDDSYRIRR H+ A ER T
Sbjct: 1 MALRRALPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPT 40
>UniRef50_A7BAA3 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 2443
Score = 35.5 bits (78), Expect = 1.8
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -3
Query: 664 NRRAHEGASRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPATRPF-YGSWPFAG 488
N A+ G G V L + +V PL + FV GGG Y T + Y SW +
Sbjct: 291 NGSAYNGNQNGIGFVELQNIKVVDPLPEGAEFVSAT-GGGVYDSVTRTVTWSYDSWSWQN 349
Query: 487 LLLTCSFLRYPPDSVD 440
+ LRYP S D
Sbjct: 350 PIQNTVVLRYPQGSYD 365
>UniRef50_UPI000023D2CE Cluster: hypothetical protein FG07076.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07076.1 - Gibberella zeae PH-1
Length = 1095
Score = 34.3 bits (75), Expect = 4.2
Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = -3
Query: 817 RWGXERGVR----AHSPAGANDLHRTEIPTA*AMRKRHASRREKGXQVSGKRQGRNRRAH 650
R G RG R A P G + +TE TA A S R RNRR +
Sbjct: 44 RGGRSRGQRQDGPAQGPGGRGNTSQTEAATAPATAPAEPSASNAPESSGNPRNRRNRRGN 103
Query: 649 EGASRG 632
GA+RG
Sbjct: 104 RGAARG 109
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.5
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 258 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 94
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.3
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2
Query: 431 NTVIHRIRGITQERTCE 481
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_Q2SKV3 Cluster: Transcriptional regulator containing a
DNA-binding HTH domain and an aminotransferase domain
(MocR family) and their eukaryotic orthologs; n=1;
Hahella chejuensis KCTC 2396|Rep: Transcriptional
regulator containing a DNA-binding HTH domain and an
aminotransferase domain (MocR family) and their
eukaryotic orthologs - Hahella chejuensis (strain KCTC
2396)
Length = 498
Score = 33.1 bits (72), Expect = 9.7
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -3
Query: 730 MRKRHASRREKGXQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*ASIFVMLVQG 551
MRKR+A R++ R+G EG + G LV S PL+ S F+ VQ
Sbjct: 395 MRKRYAMRQQTLATALQPREGDVEILVEGDNAGLHLV---CWMPSLPLSAVSTFIEQVQT 451
Query: 550 GGAYGKTPATRPFY-GSWPFAGLLL 479
G + PFY G P AGLLL
Sbjct: 452 QGV--RVYPIHPFYHGEPPAAGLLL 474
>UniRef50_Q4CSD7 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 1063
Score = 33.1 bits (72), Expect = 9.7
Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Frame = +3
Query: 639 EAPSCALLFRPCRLPDTCXPFSLR--EAWRFLIAHAVGIS-VRCR-SFAPAGL----CAR 794
E+ + A L R CR P C SL E WR L + + + R R SF PA + CA
Sbjct: 162 ESETIAYLLRHCRFPVECWRISLNLLERWRLLQSETMSLGPFRKRTSFFPADMSPASCAH 221
Query: 795 TPRSXPHRC-ALSGNYRLESIXVRXXLSPLA 884
R+ + C A RL + R +P A
Sbjct: 222 LMRNLSYTCVAWVDILRLYELATRDVAAPEA 252
>UniRef50_A7SYZ9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1107
Score = 33.1 bits (72), Expect = 9.7
Identities = 25/74 (33%), Positives = 32/74 (43%)
Frame = +3
Query: 585 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCXPFSLREAWRFLIAHAVGISVRCR 764
+RG T Q D R P +CA RP R D C ++ WR HAVG
Sbjct: 638 LRGPATGQAVVDPGRMPRPV-TCA--GRPTRGLDLCGLATVSWVWRSTKCHAVG------ 688
Query: 765 SFAPAGLCARTPRS 806
++P C R P+S
Sbjct: 689 KYSPPSTCTRRPKS 702
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,869,062
Number of Sequences: 1657284
Number of extensions: 16549387
Number of successful extensions: 45351
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 43138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45323
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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