Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_K11
         (888 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457299-1|CAG33580.1|  640|Homo sapiens FLJ13081 protein.             69   3e-11
BC007219-1|AAH07219.1|  640|Homo sapiens chromosome 10 open read...    69   3e-11
BC004183-1|AAH04183.1|  640|Homo sapiens chromosome 10 open read...    69   3e-11
AK023143-1|BAB14427.1|  642|Homo sapiens protein ( Homo sapiens ...    69   3e-11

>CR457299-1|CAG33580.1|  640|Homo sapiens FLJ13081 protein.
          Length = 640

 Score = 68.5 bits (160), Expect = 3e-11
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
 Frame = +1

Query: 454 KSKLMKLPNWYQIPLINSNASHNLSDGNLVRFRGMIQDMHNPEFYFEKFEVFNTTTNEVK 633
           K K    P W  +P +N    H L   + V+FR MIQDM +PEFY   +E  N  T    
Sbjct: 39  KLKENNAPKW--VPSLNEVPLHYLKPNSFVKFRCMIQDMFDPEFYMGVYETVNQNTKAHV 96

Query: 634 VKSGKYRDTAHVLENEKINY-SENLISGQRQTLVVVSMPGLNDWVQQ 771
           +  GKYRD A     ++++  S    + +RQT   V +PG + WV++
Sbjct: 97  LHFGKYRDVAECGPQQELDLNSPRNTTLERQTFYCVPVPGESTWVKE 143


>BC007219-1|AAH07219.1|  640|Homo sapiens chromosome 10 open reading
           frame 119 protein.
          Length = 640

 Score = 68.5 bits (160), Expect = 3e-11
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
 Frame = +1

Query: 454 KSKLMKLPNWYQIPLINSNASHNLSDGNLVRFRGMIQDMHNPEFYFEKFEVFNTTTNEVK 633
           K K    P W  +P +N    H L   + V+FR MIQDM +PEFY   +E  N  T    
Sbjct: 39  KLKENNAPKW--VPSLNEVPLHYLKPNSFVKFRCMIQDMFDPEFYMGVYETVNQNTKAHV 96

Query: 634 VKSGKYRDTAHVLENEKINY-SENLISGQRQTLVVVSMPGLNDWVQQ 771
           +  GKYRD A     ++++  S    + +RQT   V +PG + WV++
Sbjct: 97  LHFGKYRDVAECGPQQELDLNSPRNTTLERQTFYCVPVPGESTWVKE 143


>BC004183-1|AAH04183.1|  640|Homo sapiens chromosome 10 open reading
           frame 119 protein.
          Length = 640

 Score = 68.5 bits (160), Expect = 3e-11
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
 Frame = +1

Query: 454 KSKLMKLPNWYQIPLINSNASHNLSDGNLVRFRGMIQDMHNPEFYFEKFEVFNTTTNEVK 633
           K K    P W  +P +N    H L   + V+FR MIQDM +PEFY   +E  N  T    
Sbjct: 39  KLKENNAPKW--VPSLNEVPLHYLKPNSFVKFRCMIQDMFDPEFYMGVYETVNQNTKAHV 96

Query: 634 VKSGKYRDTAHVLENEKINY-SENLISGQRQTLVVVSMPGLNDWVQQ 771
           +  GKYRD A     ++++  S    + +RQT   V +PG + WV++
Sbjct: 97  LHFGKYRDVAECGPQQELDLNSPRNTTLERQTFYCVPVPGESTWVKE 143


>AK023143-1|BAB14427.1|  642|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13081 fis, clone NT2RP3002033. ).
          Length = 642

 Score = 68.5 bits (160), Expect = 3e-11
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
 Frame = +1

Query: 454 KSKLMKLPNWYQIPLINSNASHNLSDGNLVRFRGMIQDMHNPEFYFEKFEVFNTTTNEVK 633
           K K    P W  +P +N    H L   + V+FR MIQDM +PEFY   +E  N  T    
Sbjct: 39  KLKENNAPKW--VPSLNEVPLHYLKPNSFVKFRCMIQDMFDPEFYMGVYETVNQNTKAHV 96

Query: 634 VKSGKYRDTAHVLENEKINY-SENLISGQRQTLVVVSMPGLNDWVQQ 771
           +  GKYRD A     ++++  S    + +RQT   V +PG + WV++
Sbjct: 97  LHFGKYRDVAECGPQQELDLNSPRNTTLERQTFYCVPVPGESTWVKE 143


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,359,602
Number of Sequences: 237096
Number of extensions: 1817306
Number of successful extensions: 3081
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3077
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)