Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_K11
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069585-1|AAL39730.1|  605|Drosophila melanogaster LD32660p pro...   103   3e-22
AE014134-1200|AAF52465.1|  605|Drosophila melanogaster CG3430-PA...   103   3e-22
AE013599-2202|AAF58053.1| 1173|Drosophila melanogaster CG8434-PA...    29   8.6  

>AY069585-1|AAL39730.1|  605|Drosophila melanogaster LD32660p
           protein.
          Length = 605

 Score =  103 bits (247), Expect = 3e-22
 Identities = 50/107 (46%), Positives = 71/107 (66%), Gaps = 2/107 (1%)
 Frame = +1

Query: 463 LMKLPN-WYQIPLINSNASHNLSDGNLVRFRGMIQDMHNPEFYFEKFEVFNTTTNEVKVK 639
           L+K P+ W+ IPL+N    H L D  LVRFRGMIQDM +PE Y E++EV  +     +V+
Sbjct: 27  LLKDPSRWHSIPLLNYTPLHKLKDQTLVRFRGMIQDMMDPEIYLERYEV-KSADGSKRVQ 85

Query: 640 SGKYRDTAHVLENEKINY-SENLISGQRQTLVVVSMPGLNDWVQQLE 777
            GKYRD   +   E I+Y ++  + G+R+T+ VVS+PGLNDW ++ E
Sbjct: 86  EGKYRDCLKIANGEVIDYNADGNVHGERRTMFVVSVPGLNDWSKEHE 132


>AE014134-1200|AAF52465.1|  605|Drosophila melanogaster CG3430-PA
           protein.
          Length = 605

 Score =  103 bits (247), Expect = 3e-22
 Identities = 50/107 (46%), Positives = 71/107 (66%), Gaps = 2/107 (1%)
 Frame = +1

Query: 463 LMKLPN-WYQIPLINSNASHNLSDGNLVRFRGMIQDMHNPEFYFEKFEVFNTTTNEVKVK 639
           L+K P+ W+ IPL+N    H L D  LVRFRGMIQDM +PE Y E++EV  +     +V+
Sbjct: 27  LLKDPSRWHSIPLLNYTPLHKLKDQTLVRFRGMIQDMMDPEIYLERYEV-KSADGSKRVQ 85

Query: 640 SGKYRDTAHVLENEKINY-SENLISGQRQTLVVVSMPGLNDWVQQLE 777
            GKYRD   +   E I+Y ++  + G+R+T+ VVS+PGLNDW ++ E
Sbjct: 86  EGKYRDCLKIANGEVIDYNADGNVHGERRTMFVVSVPGLNDWSKEHE 132


>AE013599-2202|AAF58053.1| 1173|Drosophila melanogaster CG8434-PA
           protein.
          Length = 1173

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 10/32 (31%), Positives = 26/32 (81%)
 Frame = +2

Query: 119 ISKINTISK*YMFNIVQLKTLNIDFSLINKIQ 214
           +++I+++S+  +FN+ +L+ LN+ F+ I++I+
Sbjct: 449 MNQISSLSRQGLFNLTKLRHLNLSFNAISRIE 480


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,201,202
Number of Sequences: 53049
Number of extensions: 599523
Number of successful extensions: 1247
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)