Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_K11
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPas...    29   3.4  
Z69716-2|CAA93527.1|  474|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AF016414-5|AAG24020.1|  585|Caenorhabditis elegans Hypothetical ...    29   5.9  
AL022289-4|CAA18376.1|  511|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical protein
            K11D9.2b protein.
          Length = 1004

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 367  IHFLIMHENIMSDIETTTPDRWIENEKIMKSKL 465
            +HF+I++ +IM+ I   TP  W+E   ++K  L
Sbjct: 944  LHFVILYVDIMATIFQITPLNWVEWIAVLKISL 976


>Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical protein
            K11D9.2a protein.
          Length = 1059

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 367  IHFLIMHENIMSDIETTTPDRWIENEKIMKSKL 465
            +HF+I++ +IM+ I   TP  W+E   ++K  L
Sbjct: 944  LHFVILYVDIMATIFQITPLNWVEWIAVLKISL 976


>AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPase
            protein.
          Length = 1059

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 367  IHFLIMHENIMSDIETTTPDRWIENEKIMKSKL 465
            +HF+I++ +IM+ I   TP  W+E   ++K  L
Sbjct: 944  LHFVILYVDIMATIFQITPLNWVEWIAVLKISL 976


>Z69716-2|CAA93527.1|  474|Caenorhabditis elegans Hypothetical
           protein C04B4.2 protein.
          Length = 474

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = +1

Query: 442 EKIMKSKLMKLPNWYQIPLINSNASHNLSDGNLVRFRGMIQDMHNPEFYFEKFEVFNTTT 621
           ++  KSKL+K P   QIPL+N+ A    + G     +   + + NP   ++ +      T
Sbjct: 303 QRHQKSKLLKHPPGLQIPLLNTRAQ---ALGQASMHQQQQEHISNPYQGYQPYLHREDMT 359

Query: 622 NEVKVKSGKYRDTAH 666
           N +K  +G   D A+
Sbjct: 360 NGMKKPTGTLIDGAN 374


>AF016414-5|AAG24020.1|  585|Caenorhabditis elegans Hypothetical
           protein D1065.1 protein.
          Length = 585

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 23/85 (27%), Positives = 40/85 (47%)
 Frame = +1

Query: 481 WYQIPLINSNASHNLSDGNLVRFRGMIQDMHNPEFYFEKFEVFNTTTNEVKVKSGKYRDT 660
           + Q+  I SN+   L   N +   G+   MH+  FYF+ F  FN    E +    +Y D 
Sbjct: 194 YMQMHFIFSNSKVLLKSSNAIAKFGL---MHSVAFYFDFFFKFNLYKLEYRCLM-RYYDM 249

Query: 661 AHVLENEKINYSENLISGQRQTLVV 735
            H    +++ ++E+ +  Q  T V+
Sbjct: 250 KH--SKKEMKHAEDGLKNQTATNVL 272


>AL022289-4|CAA18376.1|  511|Caenorhabditis elegans Hypothetical
           protein ZK1225.5 protein.
          Length = 511

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 533 ETWCGSEA*SKTCTTLNFTLRNLKYLTQQQMK*RLKVEN-TEILHMFWKMRKST 691
           E W  +     T T+  F +RN   L  + M+   K  N  ++ H FW++ KST
Sbjct: 382 EMWYTAVDALTTLTSRKFEIRNCAGLNGETME---KANNFADLTHKFWELNKST 432


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,263,103
Number of Sequences: 27780
Number of extensions: 332709
Number of successful extensions: 828
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)