Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_K09
(889 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 36 0.043
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 32 0.70
07_03_1136 + 24218601-24218734,24218769-24219906 31 0.93
02_05_0686 - 30900748-30902167,30903442-30904742 31 0.93
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 31 1.6
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 31 1.6
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 30 2.8
01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982 30 2.8
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 3.7
11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903 29 6.5
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 28 8.6
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 35.9 bits (79), Expect = 0.043
Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
Frame = -1
Query: 793 PXGXXPPXXXXGKXPIXPPPXXG-GGEXPLXPXPXXXPGGXXGVXXGXGKXGKGXPXKPK 617
P PP + PPP G G + P P P P G KG P P
Sbjct: 635 PPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPP 694
Query: 616 XPLFP 602
PL P
Sbjct: 695 PPLPP 699
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.9 bits (69), Expect = 0.70
Identities = 24/75 (32%), Positives = 25/75 (33%), Gaps = 5/75 (6%)
Frame = -1
Query: 829 GGPXXXXKXFFXPXGXXPPXXXXGKXPIXPPPXXGGG-----EXPLXPXPXXXPGGXXGV 665
GGP G PP G P PPP GG P P P PG G
Sbjct: 1158 GGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGP 1217
Query: 664 XXGXGKXGKGXPXKP 620
G G+G P P
Sbjct: 1218 PPPPG--GRGLPAPP 1230
Score = 31.5 bits (68), Expect = 0.93
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -1
Query: 778 PPXXXXGKXPIXPPPXXGGGEXPLXPXPXXXPGGXXGVXXGXGKXGKGXPXKPKXP 611
PP G + PPP GG P P G GV G G P P P
Sbjct: 1111 PPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPP 1166
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -1
Query: 793 PXGXXPPXXXXGKXPIXPPPXXGGGEXPLXPXPXXXPGGXXGVXXGXGKXGKGXPXKPKX 614
P P G P PPP G G P P PGG GV G G P
Sbjct: 1085 PPPLPPTLGDYGVAP--PPPSIGAGAPP----PPPPPGGITGVPPPPPIGGLGGHQAPPA 1138
Query: 613 PLFP 602
P P
Sbjct: 1139 PPLP 1142
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.5 bits (68), Expect = 0.93
Identities = 21/64 (32%), Positives = 22/64 (34%)
Frame = +3
Query: 603 GKRGXXGXXGXPFPXXPXPXKTPXXPPGXFXGXGXSGXSPPPXXGGGKXGXFPXXXXGGX 782
G G G G P P PP G G G + PP GGG G P GG
Sbjct: 96 GAPGPLGGGGARPPGGGGGGGPPSLPP----GAGGGGGARPPAPGGGGGGGAPRRVLGGG 151
Query: 783 XPXG 794
G
Sbjct: 152 GGGG 155
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 678 PPGXFXGXGXSGXSPPPXXGGGKXGXFPXXXXGG 779
PPG G G G +P GGG G P GG
Sbjct: 172 PPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGG 205
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -1
Query: 787 GXXPPXXXXGKXPIXPPPXXGGGEXPLXPXPXXXPGGXXGVXXGXGKXGKGXPXKP 620
G PP G P PP GGG P P GG G G G +P
Sbjct: 105 GARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARP 160
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -3
Query: 788 GXXPPXXXXGEXXXFXPPXXGGGXXPAXPPPPEXXRGXXXGFXXXGXXGKGG 633
G PP G PP GGG A PP P G G G GG
Sbjct: 105 GARPPGGGGGGGPPSLPPGAGGGGG-ARPPAPGGGGGGGAPRRVLGGGGGGG 155
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.5 bits (68), Expect = 0.93
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 642 PXXPXPXKTPXXPPGXFXGXGXSGXSPPPXXGG 740
P P P K P PP G G PPP GG
Sbjct: 353 PPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = +3
Query: 642 PXXPXPXKTPXXPPGXFXGXGXSGXSPPPXXGGGKXGXFPXXXXGG 779
P P P K P PP G S PPP GG K G P GG
Sbjct: 344 PPPPPPAKGPPPPPPP---KGPSPP-PPPPPGGKKGGPPPPPPKGG 385
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 778 PPXXXXGKXPIXPPPXXGGGEXPLXPXPXXXPGGXXG 668
PP G P PPP GG P P P P G
Sbjct: 616 PPPRPPGAPPPPPPPGKPGGPPPPPPRPGSLPRNLAG 652
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 778 PPXXXXGKXPIXPPPXXGGGEXPLXPXPXXXPGGXXG 668
PP G P PPP GG P P P P G
Sbjct: 921 PPPRPPGAPPPPPPPGKPGGPPPPPPPPGSLPRNLAG 957
>02_01_0003 +
13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 678 PPGXFXGXGXSGXSPPPXXGGGKXGXFPXXXXGGXXPXG 794
P G F G G P GGG G P GG P G
Sbjct: 537 PGGGFPGGMPGGGFPGGMPGGGFPGGMPGGFPGGAMPGG 575
>01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982
Length = 301
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 696 GXGXSGXSPPPXXGGGKXGXFPXXXXGG 779
G G G SP P GGG G P GG
Sbjct: 127 GGGYGGGSPAPSHGGGAYGSSPSTPSGG 154
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 778 PPXXXXGKXPIXPPPXXGGGEXPLXPXP 695
PP G P PPP GG + P P P
Sbjct: 284 PPNAPMGMPPRIPPPPVGGTQPPPPPPP 311
>11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903
Length = 1135
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 156 NYKIMLHYKPCKKYRKGMSL*P-FFPSK 76
N M PCKK +KGM++ P FF SK
Sbjct: 657 NVNKMSKLNPCKKQKKGMNILPKFFTSK 684
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 778 PPXXXXGKXPIXPPPXXGGGEXPLXPXPXXXPGGXXG 668
PP G P PPP G P P PG G
Sbjct: 602 PPPKSTGPGPPRPPPPAMPGSSKTRPPPPLKPGAKVG 638
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,640,224
Number of Sequences: 37544
Number of extensions: 270604
Number of successful extensions: 971
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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