Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_K06
         (1024 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            93   2e-20
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    58   4e-10
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    24   6.4  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    24   6.4  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    24   6.4  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    24   8.4  
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    24   8.4  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    24   8.4  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 92.7 bits (220), Expect = 2e-20
 Identities = 39/93 (41%), Positives = 63/93 (67%)
 Frame = +3

Query: 189 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 368
           K+++LG+S VGK+SL+ +FV  +F    ++TIGA FLT+ + +DD  V  +IWDTAGQER
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQER 85

Query: 369 FQSLGVXFYRGADCCVLXFDVTPPNTXTSFESW 467
           + SL   +YRGA   ++ +D+   ++    ++W
Sbjct: 86  YHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTW 118


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 58.0 bits (134), Expect = 4e-10
 Identities = 31/107 (28%), Positives = 53/107 (49%)
 Frame = +3

Query: 186 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 365
           +K +++GD  VGKT ++  +    F  +Y  T   D  +  ++VD   V++ +WDTAGQE
Sbjct: 7   IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPT-SFDNYSAPMVVDGVQVSLGLWDTAGQE 65

Query: 366 RFQSLGVXFYRGADCCVLXFDVTPPNTXTSFESWXDXIPDTAHHPVD 506
            +  L    Y   D  ++ + V  P++  +  S     P+  HH  D
Sbjct: 66  DYDRLRPLSYPQTDVFLICYSVASPSSFENVTS--KWYPEIKHHCPD 110


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.2 bits (50), Expect = 6.4
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 198 ILGDSGVGKTSLMN 239
           ++G SG GKT+L+N
Sbjct: 131 VMGSSGAGKTTLLN 144


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 24.2 bits (50), Expect = 6.4
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 198 ILGDSGVGKTSLMN 239
           ++G SG GKT+L+N
Sbjct: 131 VMGSSGAGKTTLLN 144


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 24.2 bits (50), Expect = 6.4
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 198 ILGDSGVGKTSLMN 239
           ++G SG GKT+L+N
Sbjct: 109 VMGSSGAGKTTLLN 122


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.8 bits (49), Expect = 8.4
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +3

Query: 480 PDTAHHPVDPX*LSP 524
           P T HHP D   LSP
Sbjct: 89  PPTVHHPADAVTLSP 103


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 23.8 bits (49), Expect = 8.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 159 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSN 266
           K+ +  K    V + G+ G GKT+ +N F  +KF++
Sbjct: 8   KLGASGKKPFTVFVEGNIGSGKTTFLNHF--QKFND 41


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 23.8 bits (49), Expect = 8.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 159 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSN 266
           K+ +  K    V + G+ G GKT+ +N F  +KF++
Sbjct: 8   KLGASGKKPFTVFVEGNIGSGKTTFLNHF--QKFND 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,634
Number of Sequences: 2352
Number of extensions: 12252
Number of successful extensions: 30
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 113052225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)