Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_K05
(894 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0926 + 12448032-12448231,12448727-12448815,12449956-124500... 107 1e-23
10_08_0180 + 15502809-15503312,15503399-15503454,15503934-155040... 94 1e-19
03_01_0359 - 2805094-2805175,2805256-2805347,2805443-2805517,280... 87 2e-17
03_02_0651 + 10183050-10184167,10184350-10184974,10185023-101852... 43 4e-04
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 31 0.94
11_04_0168 + 14391244-14391325,14392132-14392155,14392256-143923... 31 1.6
06_01_0931 + 7192519-7194075 31 1.6
05_01_0192 + 1394342-1396645 30 2.2
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 30 2.9
07_03_1107 - 24024387-24024497,24025799-24026410 29 5.0
11_03_0035 - 9130678-9130887,9130963-9131255,9132328-9132604 29 6.6
11_06_0284 + 21909758-21913645 28 8.7
06_03_1403 + 29923503-29923821,29924269-29924405,29924495-299246... 28 8.7
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 28 8.7
01_01_0895 + 7052118-7053110,7053249-7053252,7054450-7055189 28 8.7
>03_02_0926 +
12448032-12448231,12448727-12448815,12449956-12450096,
12450181-12450283,12450386-12450481,12450580-12450654,
12450754-12450823,12451028-12451111
Length = 285
Score = 107 bits (257), Expect = 1e-23
Identities = 65/167 (38%), Positives = 93/167 (55%), Gaps = 10/167 (5%)
Frame = +3
Query: 345 SISERVSIFKGDITKLEIDAIVNAANSRLKAGGGVDGAIHRAAGPFLQAECDSI----GG 512
S S+ +S+ +T + I VNAAN R+ GGGVDGAIHR AGP L C + G
Sbjct: 108 SNSDYLSMTMKKMTVIHISQ-VNAANERMLGGGGVDGAIHRTAGPELVEACRKVPEVKSG 166
Query: 513 --CPTGDAKVTGGYNLPAKYIIHTVGP---QDGSAE-KLESCYEKCLSYQQEYQIKSIAF 674
CPTG+A++T + LP +IHTVGP D E L + Y L ++ I+ IA
Sbjct: 167 VRCPTGEARITPAFKLPVSRVIHTVGPIYDMDKQPEVSLNNAYTNSLKLAKQNGIQYIAL 226
Query: 675 PCISTGIYGFPNRLAAHIALRTARKF*KRIQK*TELYFARSYLSMWR 815
P IS G+Y +P + A+ IA+ TA++F I++ + F+ +WR
Sbjct: 227 PAISCGVYRYPPKEASKIAVSTAQRFSNDIKEVHFVLFSDELYDIWR 273
>10_08_0180 +
15502809-15503312,15503399-15503454,15503934-15504053,
15504190-15504260,15504603-15504696,15504772-15504978,
15505406-15505657,15505781-15505889,15506112-15506179,
15506278-15506347,15506429-15506503,15506600-15506691,
15506779-15506860
Length = 599
Score = 94.3 bits (224), Expect = 1e-19
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 6/104 (5%)
Frame = +3
Query: 459 IHRAAGPFLQAECDSIGGCPTGDAKVTGGYNLPAKYIIHTVGPQ------DGSAEKLESC 620
+H AAG L EC ++GGC TG AK+T Y+LPA+ +IHTVGP+ + L C
Sbjct: 153 LHAAAGSGLAEECSTLGGCRTGMAKMTNAYDLPARKVIHTVGPKYAVKYHTAAENALSHC 212
Query: 621 YEKCLSYQQEYQIKSIAFPCISTGIYGFPNRLAAHIALRTARKF 752
Y CL E ++SIA CI T +P AAH+A+RT R+F
Sbjct: 213 YRSCLELLIENGLESIAMGCIYTEAKNYPREPAAHVAIRTVRRF 256
>03_01_0359 -
2805094-2805175,2805256-2805347,2805443-2805517,
2805582-2805675,2805769-2805872,2806777-2806885,
2807397-2807609,2808170-2808289,2809060-2809115,
2809210-2809287,2809374-2809733
Length = 460
Score = 86.6 bits (205), Expect = 2e-17
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 6/102 (5%)
Frame = +3
Query: 348 ISERVSIFKGDITKLEIDAIVNAANSRLKAGGGVDGAIHRAAGPFLQAECDSIGGCPTGD 527
I+ ++ +++G LE+DA+VN+ N L G +H AAGP L EC ++GGC TG
Sbjct: 95 INSKICLWRGHPWNLEVDAVVNSTNENLDEAHSSPG-LHAAAGPGLAEECTTLGGCRTGM 153
Query: 528 AKVTGGYNLPAKYIIHTVGPQ------DGSAEKLESCYEKCL 635
AK+T Y+LPA+ +IHTVGP+ + L CY CL
Sbjct: 154 AKMTNAYDLPARKVIHTVGPKYAVKYHTAAENALSHCYRSCL 195
>03_02_0651 +
10183050-10184167,10184350-10184974,10185023-10185208,
10185325-10185660
Length = 754
Score = 42.7 bits (96), Expect = 4e-04
Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Frame = +3
Query: 318 IKINTEKNKSISERVSIFKGDITKLE------IDAIVNAANSRLK-AGGGVDGAIHRAAG 476
+K K S R F GDIT+L+ + I NAAN RLK GGGV+ AI+ AAG
Sbjct: 332 VKEKAAKKNINSSRFFTFVGDITQLQSKGGLRCNVIANAANWRLKPGGGGVNAAIYNAAG 391
Query: 477 PFLQ 488
LQ
Sbjct: 392 EDLQ 395
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 31.5 bits (68), Expect = 0.94
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Frame = -3
Query: 544 PPVTLASPVGHPPIESHSACKKGPAARCMAPSTP---PPAFSLELAAFTI--ASISSLVM 380
PP P HPP H + P AP P PP + FT A++S +M
Sbjct: 227 PPSPHRHPAAHPPPPPHHPAPRPPPPMAAAPRQPAALPPVPGATVVPFTTMQAAVSRNMM 286
Query: 379 SPLKIET 359
L + T
Sbjct: 287 ESLSVPT 293
>11_04_0168 +
14391244-14391325,14392132-14392155,14392256-14392381,
14392491-14392832,14392955-14393070,14393166-14393426,
14393875-14394072,14394177-14394254
Length = 408
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +3
Query: 276 SKKSTTDDLKEFEKIKINTEKNKSISERVSIFKG--DITKLEIDAIVNAANSRLKAGGGV 449
SKKS D+ + + +++ NK E ++ + G +K EI+ +N ANS++ G G
Sbjct: 61 SKKSKADETIDSTR---SSQDNKVHGEVINRWSGLYKFSKGEIEKAINYANSKICLGSGS 117
Query: 450 DGAIHRAAGP 479
G +++ P
Sbjct: 118 AGQVYQGVLP 127
>06_01_0931 + 7192519-7194075
Length = 518
Score = 30.7 bits (66), Expect = 1.6
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = -3
Query: 613 SSFSADPSWGPTVWMIYLAGKL*PPVTLASPVGHPPIESHS-ACKKGPAARCMAPSTPPP 437
SSF+ADP P ++ ++G L +A PV PP ++ AC + C A + PP
Sbjct: 25 SSFTADP---PAEFLCPISGTL-----MADPVVVPPGQTFERACIQA----CAALAFSPP 72
Query: 436 AFSLELAAFTIASISSLVMSP 374
A + +L++ ++ S LV+ P
Sbjct: 73 AVAADLSSLPPSASSPLVLVP 93
>05_01_0192 + 1394342-1396645
Length = 767
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -3
Query: 508 PIESHSACKKGPAARCMAPSTPPPAFSLELAAFTIASISSLVMSP 374
P S S+ K P+ R PS+PPP + AA AS++ ++ SP
Sbjct: 247 PTSSSSSPSK-PSPRMATPSSPPPEAPVSSAAPPPASLNPMLPSP 290
>07_03_0471 +
18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -3
Query: 694 IPVDI-HGKAIDFIWYSCWYDR 632
+PVD+ HG ++DF+W S +DR
Sbjct: 443 VPVDLNHGFSVDFVWKSTSFDR 464
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = -3
Query: 535 TLASPVGHPPIESHSACKKGPAARCMAPSTPPPAFSLELAAFTIASISSLVMSPLKIETR 356
T +P PP +S A P A A +TPPPA S + A + S +P I T+
Sbjct: 79 TTPAPTKAPPTKSTKAPAPAPKA---AKATPPPASSPPVEAPVASPPSPAAEAPATIPTK 135
Query: 355 SE 350
+
Sbjct: 136 PD 137
>11_03_0035 - 9130678-9130887,9130963-9131255,9132328-9132604
Length = 259
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 511 PPIESHSACKKGPAARCMAPSTPPPAFSLELA 416
PP + HS KG AP+ PP LEL+
Sbjct: 139 PPFKKHSIFFKGLFGTAPAPAPAPPLLELELS 170
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 28.3 bits (60), Expect = 8.7
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 225 ENVDPWSKYLNKSQGIDSKKSTTDDLK-EFEKIKINTEKNKSISE-RVSIFKGDITKL 392
E+ DPW Y+ K SKK +K + EK+KI + K S+ + KGD T L
Sbjct: 295 EDPDPWKDYVKKCGNHRSKKRMLRKIKRKIEKMKIYEKFEKIKSDIQDGQQKGDKTLL 352
>06_03_1403 +
29923503-29923821,29924269-29924405,29924495-29924647,
29924690-29925280,29925523-29925597,29925901-29926169,
29927238-29927331
Length = 545
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 201 KSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFK-- 374
K D IDLE +D +SK N+ K EKI+ + + E++ K
Sbjct: 309 KEVDHIDLEELDKFSKLQNEQNANRLKVLEIQQKLSSEKIEQTKISHLAAKEQMEAAKVQ 368
Query: 375 GDITKLEIDAIVNAANSRL 431
+ KLE++A + +RL
Sbjct: 369 REARKLEVEARMYETYNRL 387
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 219 DLENVDPWSKYLNKSQGIDSKKSTTD--DLKEFEK-IKINTEKNKSISERVSIFKGDITK 389
+++N D +L+ DSKK D D + +K ++ +E+NK + R+S K
Sbjct: 91 EMDNPDMAPYFLSFINASDSKKQAKDNQDNERLQKELESLSEENKDLKSRISSLLEQTNK 150
Query: 390 LEIDAI 407
E++ +
Sbjct: 151 AELEVV 156
>01_01_0895 + 7052118-7053110,7053249-7053252,7054450-7055189
Length = 578
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +3
Query: 237 PWSKYLNKSQGIDSKKSTT----DDLKEFEKIKINTEKNKSISERVSIFKGDITKLE-ID 401
PW +++K G+D+K + T D L E I + E+ +S + V + D + +D
Sbjct: 242 PWLAWVDKLTGLDAKVARTSAAMDGLLE-RVIADHRERRRSRGQAVGDGEADADHRDFVD 300
Query: 402 AIVNAANSRLKAGGGVDGAI 461
+++ + + AG G G +
Sbjct: 301 VMLDVSEAEEGAGAGAGGVL 320
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,495,913
Number of Sequences: 37544
Number of extensions: 456315
Number of successful extensions: 1688
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1681
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -