Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_K02
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0591 + 4384246-4384434,4384531-4384658,4384741-4384778,438...   133   2e-31
01_06_0030 + 25756294-25756575,25756977-25757101,25757276-257573...   111   9e-25
07_01_0713 - 5438005-5438294,5438441-5438567,5438638-5438687,543...    29   3.7  
03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401     29   4.9  
07_01_0366 + 2723069-2723116,2723239-2723488,2723563-2723715,272...    28   8.5  
03_04_0032 - 16663018-16663026,16663072-16663235,16663384-166635...    28   8.5  

>02_01_0591 +
           4384246-4384434,4384531-4384658,4384741-4384778,
           4385248-4385358,4386266-4386345,4386910-4386946,
           4387230-4387271,4387555-4387595,4387645-4387746
          Length = 255

 Score =  133 bits (322), Expect = 2e-31
 Identities = 66/150 (44%), Positives = 97/150 (64%), Gaps = 2/150 (1%)
 Frame = +2

Query: 290 NSKILEFLELVGRLKHVKRTGWILCDINDCETIAGHMYRMGIMTFLLTEENNPTKLDRIK 469
           ++  ++FL L  RLK  KR GW+   +   E++A HMYRMG+M   L   + P+ ++R +
Sbjct: 49  SASAIDFLTLCYRLKTTKRAGWVRRGVQGPESVADHMYRMGVMA--LVAADLPSGVNRDR 106

Query: 470 CLQIALIHDLAECIVGDLTPHCGVSPEEKHRREDEAMKTISGLT--GIAGDRMYELYKEY 643
           C+++A++HD+AE IVGD+TP  GV  EEK RRE EA+  +  L   G   + + EL+ EY
Sbjct: 107 CVKMAIVHDIAEAIVGDITPSDGVPKEEKSRREQEALDHMCSLLGGGPRAEEIRELWMEY 166

Query: 644 EDXSSPEAKFAKDLDRYDMILQAFEYEKRE 733
           E  ++ EAK  KD D+ +MILQA EYEK +
Sbjct: 167 EQNATLEAKVVKDFDKVEMILQALEYEKEQ 196


>01_06_0030 +
           25756294-25756575,25756977-25757101,25757276-25757313,
           25757501-25757611,25757703-25757782,25758264-25758318,
           25758465-25758851,25759080-25759223,25759630-25759671,
           25759755-25759837
          Length = 448

 Score =  111 bits (266), Expect = 9e-25
 Identities = 58/135 (42%), Positives = 82/135 (60%), Gaps = 2/135 (1%)
 Frame = +2

Query: 293 SKILEFLELVGRLKHVKRTGWILCDINDCETIAGHMYRMGIMTFLLTEENNPTKLDRIKC 472
           S  ++FL L  RLK  KR GWI   I   E+IA HMYRM +M  +     +   +DR +C
Sbjct: 81  SSAIDFLTLCHRLKTTKRKGWINHSIKGPESIADHMYRMALMALIA---GDLPAVDRERC 137

Query: 473 LQIALIHDLAECIVGDLTPHCGVSPEEKHRREDEAMKTISGLT--GIAGDRMYELYKEYE 646
           ++IA++HD+AE IVGD+TP  G+   EK RRE +A+  +  +   G   D + EL++EYE
Sbjct: 138 IKIAIVHDIAEAIVGDITPSDGIPKAEKSRREQKALNEMCEVLGGGPIADEIKELWEEYE 197

Query: 647 DXSSPEAKFAKDLDR 691
           + SS EA   KD D+
Sbjct: 198 NNSSIEANLVKDFDK 212


>07_01_0713 -
           5438005-5438294,5438441-5438567,5438638-5438687,
           5439119-5439426,5439581-5439673,5439840-5440197,
           5440235-5440267,5440324-5440482,5440734-5440908
          Length = 530

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
 Frame = +2

Query: 404 RMGIMTFLLTEENNPTKLDR---IKCL--QIALIH-DLAECIVGDLTPHCGVSPEEKHRR 565
           R  +  F +  +N P K      I+CL  Q   +H D+ +C+ G L+ HC +S +    R
Sbjct: 281 RSTMWEFAIKCDNRPYKRGNKPDIRCLLCQKLFLHADITQCMKGHLSKHCPMSTQSSLER 340

Query: 566 EDEAMK 583
              A+K
Sbjct: 341 FHIALK 346


>03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401
          Length = 500

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +2

Query: 542 SPEEKHRREDEAMKTISGLTGIAGDRMYELYKEYEDXSSPEAK 670
           SP  ++  E+E   +  G +G   DR+Y + K ++  ++P A+
Sbjct: 304 SPAARNGSEEEGSDSDGGRSGSGSDRVYTIDKVHQGATAPAAR 346


>07_01_0366 +
           2723069-2723116,2723239-2723488,2723563-2723715,
           2723800-2723905,2723988-2724102,2724756-2724791
          Length = 235

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 550 FRTHSTVRCEVSNNALSQVVNESY 479
           F+TH T  C +    L+Q+V ++Y
Sbjct: 31  FKTHQTAGCPIKREELTQIVTKNY 54


>03_04_0032 -
           16663018-16663026,16663072-16663235,16663384-16663517,
           16664300-16664393,16667458-16667566,16668441-16668489,
           16668622-16668647
          Length = 194

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 644 RILCIIHTFYHQQFQLVLKLSSWPHLLFC 558
           R+  +    YH  FQ++LKL    HL  C
Sbjct: 155 RLFRVYSHMYHSHFQMILKLKEEAHLSTC 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,745,446
Number of Sequences: 37544
Number of extensions: 354241
Number of successful extensions: 707
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)