Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_K01
(917 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 138 3e-32
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 137 5e-32
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 137 5e-32
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 137 5e-32
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 137 5e-32
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 137 5e-32
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 137 5e-32
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 137 5e-32
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 137 5e-32
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 137 6e-32
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 128 4e-29
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 117 7e-26
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 102 2e-21
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 138 bits (333), Expect = 3e-32
Identities = 74/170 (43%), Positives = 103/170 (60%), Gaps = 6/170 (3%)
Frame = +3
Query: 159 KKNLRKNPGTMILGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIG 326
K + +NP +L GV R+S+S M+ +KA KY L V K +G
Sbjct: 41 KPHCSRNP---VLVRGVGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVG 97
Query: 327 GEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 500
G+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 98 GDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
Query: 501 AGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGQLQ 650
GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + ++
Sbjct: 158 RGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVK 207
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 137 bits (332), Expect = 5e-32
Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 6/170 (3%)
Frame = +3
Query: 159 KKNLRKNPGTMILGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIG 326
K + +NP +L G+ R+S+S M+ +KA KY L V K +G
Sbjct: 41 KPHCSRNP---VLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVG 97
Query: 327 GEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 500
G+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 98 GDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
Query: 501 AGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGQLQ 650
GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + ++
Sbjct: 158 RGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVK 207
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 137 bits (332), Expect = 5e-32
Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 6/170 (3%)
Frame = +3
Query: 159 KKNLRKNPGTMILGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIG 326
K + +NP +L G+ R+S+S M+ +KA KY L V K +G
Sbjct: 41 KPHCSRNP---VLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVG 97
Query: 327 GEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 500
G+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 98 GDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
Query: 501 AGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGQLQ 650
GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + ++
Sbjct: 158 RGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVK 207
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 137 bits (332), Expect = 5e-32
Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 6/170 (3%)
Frame = +3
Query: 159 KKNLRKNPGTMILGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIG 326
K + +NP +L G+ R+S+S M+ +KA KY L V K +G
Sbjct: 41 KPHCSRNP---VLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVG 97
Query: 327 GEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 500
G+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 98 GDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
Query: 501 AGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGQLQ 650
GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + ++
Sbjct: 158 RGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVK 207
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 137 bits (332), Expect = 5e-32
Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 6/170 (3%)
Frame = +3
Query: 159 KKNLRKNPGTMILGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIG 326
K + +NP +L G+ R+S+S M+ +KA KY L V K +G
Sbjct: 41 KPHCSRNP---VLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVG 97
Query: 327 GEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 500
G+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 98 GDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
Query: 501 AGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGQLQ 650
GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + ++
Sbjct: 158 RGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVK 207
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 137 bits (332), Expect = 5e-32
Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 6/170 (3%)
Frame = +3
Query: 159 KKNLRKNPGTMILGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIG 326
K + +NP +L G+ R+S+S M+ +KA KY L V K +G
Sbjct: 41 KPHCSRNP---VLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVG 97
Query: 327 GEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 500
G+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 98 GDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
Query: 501 AGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGQLQ 650
GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + ++
Sbjct: 158 RGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVK 207
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 137 bits (332), Expect = 5e-32
Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 6/170 (3%)
Frame = +3
Query: 159 KKNLRKNPGTMILGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIG 326
K + +NP +L G+ R+S+S M+ +KA KY L V K +G
Sbjct: 41 KPHCSRNP---VLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVG 97
Query: 327 GEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 500
G+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 98 GDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
Query: 501 AGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGQLQ 650
GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + ++
Sbjct: 158 RGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVK 207
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 137 bits (332), Expect = 5e-32
Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 6/170 (3%)
Frame = +3
Query: 159 KKNLRKNPGTMILGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIG 326
K + +NP +L G+ R+S+S M+ +KA KY L V K +G
Sbjct: 41 KPHCSRNP---VLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVG 97
Query: 327 GEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 500
G+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 98 GDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
Query: 501 AGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGQLQ 650
GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + ++
Sbjct: 158 RGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVK 207
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 137 bits (332), Expect = 5e-32
Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 6/170 (3%)
Frame = +3
Query: 159 KKNLRKNPGTMILGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIG 326
K + +NP +L G+ R+S+S M+ +KA KY L V K +G
Sbjct: 41 KPHCSRNP---VLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVG 97
Query: 327 GEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 500
G+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 98 GDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
Query: 501 AGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGQLQ 650
GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + ++
Sbjct: 158 RGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVK 207
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 137 bits (331), Expect = 6e-32
Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 6/170 (3%)
Frame = +3
Query: 159 KKNLRKNPGTMILGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIG 326
K + +NP +L G+ R+S+S M+ +KA KY L V K +G
Sbjct: 41 KPHCGRNP---VLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVG 97
Query: 327 GEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 500
G+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 98 GDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
Query: 501 AGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGQLQ 650
GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + ++
Sbjct: 158 RGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVK 207
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 128 bits (308), Expect = 4e-29
Identities = 71/171 (41%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Frame = +3
Query: 159 KKNLRKNPGTMILGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIG 326
K + +NP +L G+ R+S+S M+ +KA KY L V K +G
Sbjct: 41 KPHCSRNP---VLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVG 97
Query: 327 GEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 500
G+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GR
Sbjct: 98 GDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRR 157
Query: 501 AGKR-VVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGQLQ 650
GK VV + L SGLLLVTGP N PLRR Q++VI TST+I + ++
Sbjct: 158 RGKNWVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVK 208
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 117 bits (281), Expect = 7e-26
Identities = 62/150 (41%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Frame = +3
Query: 207 VMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYP 386
+ S+ M+ K KY L V K +GG+KNGGTR V L++ +YP
Sbjct: 60 ICHVSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYP 117
Query: 387 TQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTG 560
T++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L SGLLLVT
Sbjct: 118 TEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTD 177
Query: 561 PFAFNSCPLRRIPQRYVICTSTRISLGQLQ 650
++ PLRR Q++VI TST+I + ++
Sbjct: 178 LWSSIEVPLRRTHQKFVIATSTKIDISNVK 207
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 102 bits (244), Expect = 2e-21
Identities = 53/118 (44%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Frame = +3
Query: 216 FSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQE 395
+S+ M+ K KY L V K +GG+KNGGTR V L++ +YPT++
Sbjct: 2 YSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED 59
Query: 396 KIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 563
R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L SGLLLVTGP
Sbjct: 60 VPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGP 117
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,948,140
Number of Sequences: 237096
Number of extensions: 2181426
Number of successful extensions: 4164
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4150
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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